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2017
1 Holter, Karl Erik; Kehlet, Benjamin Dam; Devor, Anna; Sejnowski, Terrence J.; Dale, Anders M.; Omholt, Stig William; Ottersen, Ole Petter; Nagelhus, Erlend Arnulf; Mardal, Kent-Andre; Pettersen, Klas.
Interstitial solute transport in 3D reconstructed neuropil occurs by diffusion rather than bulk flow. Proceedings of the National Academy of Sciences of the United States of America 2017 ;Volum 114.(37) s. 9894-9899
NTNU UiO Untitled
 
2 Macqueen, Daniel J.; Primmer, Craig R.; Houston, Ross D.; Nowak, Barbara F.; Bernatchez, Louis; Bergseth, Steinar; Davidson, William S.; Gallardo-Escárate, Cristian; Goldammer, Tom; Guiguen, Yann; Iturra, Patricia; Kijas, James W.; Koop, Ben F.; Lien, Sigbjørn; Maass, Alejandro; Martin, Samuel A. M.; McGinnity, Philip; Montecino, Martin; Naish, Kerry; Nichols, Krista M.; Ólafsson, Kristinn; Omholt, Stig William; Palti, Yniv; Plastow, Graham S.; Rexroad, Caird E. 3rd; Rise, Matthew L.; Ritchie, Rachael J.; Sandve, Simen Rød; Schulte, Patricia M.; Tello, Alfredo; Vidal, Rodrigo; Vik, Jon Olav; Wargelius, Anna; Yáñez, José Manuel.
Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture. BMC Genomics 2017 ;Volum 18.
HAVFORSK NTNU NMBU Untitled
 
2016
3 Gjuvsland, Arne Bjørke; Zörgö, Enikö Beatrix; Antony Samy, Jeevan Karloss; Stenberg, Simon; Demirsoy, Ibrahim H; Roque, Francisco; Maciaszczyk-Dziubinska, Ewa; Migocka, Magdalena; Alonso-Perez, Elisa; Zackrisson, Martin; Wysocki, Robert; Tamas, Markus J; Jonassen, Inge; Omholt, Stig William; Warringer, Jonas.
Disentangling genetic and epigenetic determinants of ultrafast adaptation. Molecular Systems Biology 2016 ;Volum 12.(12)
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4 Kahn, Uniza Wahid; Øverli, Øyvind; Hinkle, Patricia M.; Pasha, Farhan Ahmad; Johansen, Ida Beitnes; Berget, Ingunn; Silva, Patricia I. M.; Kittilsen, Silje; Höglund, Erik; Omholt, Stig W; Våge, Dag Inge.
A novel role for pigment genes in the stress response in rainbow trout (Oncorhynchus mykiss). Scientific Reports 2016 ;Volum 6.
NIVA NTNU UiO NMBU Untitled
 
5 Lien, Sigbjørn; Koop, Ben F; Sandve, Simen Rød; Miller, Jason R.; Kent, Matthew Peter; Nome, Torfinn; Hvidsten, Torgeir Rhoden; Leong, Jong; Minkley, David R.; Zimin, Aleksey; Grammes, Fabian; Grove, Harald; Gjuvsland, Arne Bjørke; Walenz, Brian; Hermansen, Russell A.; von Schalburg, Kristian R.; Rondeau, Eric; Genova, Alex Di; Antony Samy, Jeevan Karloss; Vik, Jon Olav; Vigeland, Magnus Dehli; Caler, Lis; Grimholt, Unni; Jentoft, Sissel; Våge, Dag Inge; de Jong, Pieter J.; Moen, Thomas; Baranski, Matthew; Palti, Yniv; Smith, Douglas W.; Yorke, James A.; Nederbragt, Alexander J.; Tooming-Klunderud, Ave; Jakobsen, Kjetill Sigurd; Jiang, Xuanting; Fan, Dingding; Hu, Yan; Liberles, David A.; Vidal, Rodrigo; Iturra, Patricia; Jones, Steven J.M.; Jonassen, Inge; Maass, Alejandro; Omholt, Stig William; Davidson, William S.
The Atlantic salmon genome provides insights into rediploidization. Nature 2016 ;Volum 533.(7602) s. 200-205
NOFIMA NTNU OUS UiB UiO NMBU VETINST Untitled
 
6 Løland, Anders; Omholt, Stig William; Lamberg, Anders; Kristensen, Torstein; Urke, Henning Andre; Olsen, Yngvar.
Metodevurdering for registrering rømt oppdrettslaks. Trondheim: NTNU, Institutt for biologi 2016 (ISBN 978-82-998249-3-4) 44 s.
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7 Omholt, Stig William; Hunter, Peter J..
The human physiome: A necessary key for the creative destruction of medicine. Interface Focus 2016 ;Volum 6.(2) s. -
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8 Safaei, Soroush; Bradley, Christopher P; Suresh, Vinod; Mithraratne, Kumar; Muller, Alexandre; Ho, Harvey; Ladd, David; Hellevik, Leif Rune; Omholt, Stig William; Chase, J Geoffrey; Müller, Lucas O; Watanabe, Sansuke M; Blanco, Pablo J; de Bono, Bernard; Hunter, Peter J..
Roadmap for cardiovascular circulation model. Journal of Physiology 2016 ;Volum 594.(23) s. 6909-6928
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9 Soroush, Safaei; Bradley, Christopher P; Suresh, Vinod; Mithraratne, Kumar; Muller, Alexandre; Ho, Harvey; Ladd, David; Hellevik, Leif Rune; Omholt, Stig William; Chase, J Geoffrey; Muller, Lucas Omar; Watanabe, Sansuke M; Blanco, Pablo J; Bono, Bernard; Hunter, Peter J..
Roadmap for cardiovascular circulation model. Journal of Physiology 2016
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10 Zackrisson, Martin; Hallin, Johan; Ottoson, Lars-Göran; Dahl, Peter; Fernandez-Parada, Esteban; Landström, Erik; Fernandez-Ricaud, Luciano; Kaferle, Petra; Skyman, Andreas; Stenberg, Simon; Omholt, Stig William; Petrovic, Uros; Warringer, Jonas; Blomberg, Anders.
Scan-o-matic: High-Resolution Microbial Phenomics at a Massive Scale. G3: Genes, Genomes, Genetics 2016 ;Volum 6.(9) s. 3003-3014
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2015
11 Halnes, Geir; Østby, Ivar; Pettersen, Klas; Omholt, Stig William; Einevoll, Gaute.
An Electrodiffusive Formalism for Ion Concentration Dynamics in Excitable Cells and the Extracellular Space Surrounding Them. I: Advances in Cognitive Neurodynamic (IV). Proceedings of the Fourth International Conference on Cognitive Neurodynamics - 2013. Springer Science+Business Media B.V. 2015 ISBN 978-94-017-9548-7. s. 353-360
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12 Ibstedt, Sebastian; Stenberg, Simon; Bages, Sara; Gjuvsland, Arne Bjørke; Salinas, Francisco; Kourtchenko, Olga; Samy, Jeevan K.A.; Blomberg, Anders; Omholt, Stig William; Liti, Gianni; Beltran, Gemma; Warringer, Jonas.
Concerted Evolution of Life Stage Performances Signals Recent Selection on Yeast Nitrogen Use. Molecular biology and evolution 2015 ;Volum 32.(1) s. 153-161
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13 Kohler, Achim; Böcker, Ulrike; Shapaval, Volha; Forsmark, Annabelle; Andersson, Mats; Warringer, Jonas; Martens, Harald; Omholt, Stig William; Blomberg, Anders.
High-Throughput Biochemical Fingerprinting of Saccharomyces cerevisiae by Fourier Transform Infrared Spectroscopy. PLoS ONE 2015 ;Volum 10.(2)
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14 Nordbø, Øyvind; Gjuvsland, Arne Bjørke; Nermoen, Anders; Land, Sander; Niederer, Steven; Lamata, Pablo; Lee, Jack; Smith, Nicolas P.; Omholt, Stig William; Vik, Jon Olav.
Towards causally cohesive genotype-phenotype modelling for characterization of the soft-tissue mechanics of the heart in normal and pathological geometries. Journal of the Royal Society Interface 2015 ;Volum 12.(106)
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15 Pettersen, Klas Henning; Omholt, Stig William; Ottersen, Ole Petter; Nagelhus, Erlend Arnulf.
Role of astrocytes in microscale pressure-flow models.. Virtual Physiological Human: Dementia Research Enabled by IT. General Assembly Meeting No. 3; 2015-03-16 - 2015-03-18
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16 Voit, Eberhard; Martens, Harald; Omholt, Stig William.
150 Years of the Mass Action Law. PloS Computational Biology 2015 ;Volum 11.(1) s. -
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2014
17 Pettersen, Klas; Omholt, Stig William; Ottersen, Ole Petter; Nagelhus, Erlend Arnulf.
Modelling of microscale water transport in the brain. Virtual Physiological Human: Dementia Research Enabled by IT. General Assembly Meeting No. 2.; 2014-03-20 - 2014-03-21
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18 Gjuvsland, Arne Bjørke; Wang, Yunpeng; Plahte, Erik; Omholt, Stig W.
Highly monotone genotype-phenotype maps emerging from gene regulatory networks. Euro Evo Devo; 2014-07-22 - 2014-07-25
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19 Helgeland, Hanna; Sandve, Simen Rød; Torgersen, Jacob; Halle, Mari Kyllesø; Sundvold, Hilde; Omholt, Stig William; Våge, Dag Inge.
The evolution and functional divergence of the beta-carotene oxygenase gene family in teleost fish-Exemplified by Atlantic salmon. Gene 2014 ;Volum 543.(2) s. 268-274
NOFIMA NMBU Untitled
 
20 Noble, DG; Jablonka, Eva; Joyner, MJ; Muller, GB; Omholt, Stig William.
Evolution evolves: Physiology returns to centre stage. Journal of Physiology 2014 ;Volum 592.(11) s. 2237-2244
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21 Nordbø, Øyvind; Lamata, P.; Land, Sander; Niederer, Steven A.; Aronsen, Jan Magnus; Louch, William Edward; Sjaastad, Ivar; Martens, Harald; Gjuvsland, Arne Bjørke; Tøndel, Kristin; Torp, Hans; Lohezic, M; Schneider, Jürgen; Remme, Espen W.; Smith, Nicolas P; Omholt, Stig W; Vik, Jon Olav.
A computational pipeline for quantification of mouse myocardial stiffness parameters. Computers in Biology and Medicine 2014 ;Volum 53. s. 65-75
BJORKNES NTNU OUS UiO NMBU Untitled
 
22 Omholt, Stig William.
Det virtuelle fysiologiske mennesket.
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23 Omholt, Stig William.
Doctors can't explain the cause of 90 percent of high blood pressure cases. tmc net [Internett] 2014-05-28
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24 Omholt, Stig William.
Effect of medication is affected by copies of genetic.... Science daily [Internett] 2014-05-28
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25 Omholt, Stig William.
Elektronisk implantat på størrelse med et riskorn kan behandle sykdommer. nrk.no og forskning.no [Internett] 2014-05-25
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26 Omholt, Stig William.
High Blood Pressure results from stiff arteries. topnews united states [Internett] 2014-05-28
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27 Omholt, Stig William.
Large database and computer model aids understanding of high blood pressure. Medical News Today [Internett] 2014-05-28
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28 Omholt, Stig William.
Large database and computer model aids understanding of high blood pressure. medical news today [Internett] 2014-05-28
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29 Omholt, Stig William.
Sally – quo vadis?. dagens næringsliv [Internett] 2014-07-04
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30 Omholt, Stig William.
Stiff arteries alone can cause high blood pressure. indian express [Internett] 2014-05-28
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31 Pettersen, Klas; Bugenhagen, Scott M.; Nauman, Javaid; Beard, Daniel A.; Omholt, Stig W.
Arterial Stiffening Provides Sufficient Explanation for Primary Hypertension. PloS Computational Biology 2014 ;Volum 10.(5)
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32 Vik, Jon Olav; Gjuvsland, Arne Bjørke; de Bono, Bernard; Omholt, Stig William.
From genotype to phenotype. I: Computational Biomedicine Modelling the human body. Oxford University Press 2014 ISBN 978-0-19-965818-3. s. 33-58
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33 Vik, Jon Olav; Gjuvsland, Arne Bjørke; Sandve, Simen Rød; Torgersen, Jacob; Lien, Sigbjørn; Omholt, Stig William.
The Digital Salmon: Virtual physiology into aquaculture. Virtual Physiological Human 2014; 2014-09-09 - 2014-09-12
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2013
34 Flatt, Thomas; Amdam, Gro Vang; Kirkwood, Thomas B.L.; Omholt, Stig W.
Life-history evolution and the polyphenic regulation of somatic maintenance and survival. The Quarterly review of biology 2013 ;Volum 88.(3) s. 185-218
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35 Gjuvsland, Arne Bjørke; Vik, Jon Olav; Beard, Dan; Hunter, Peter J.; Omholt, Stig W.
Bridging the genotypephenotype gap: what does it take?. Journal of Physiology 2013 ;Volum 591.(8) s. 2055-2066
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36 Gjuvsland, Arne Bjørke; Wang, Yunpeng; Plahte, Erik; Omholt, Stig W.
Monotonicity is a key feature of genotype-phenotype maps. Frontiers in Genetics 2013 ;Volum 4. s. -
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37 Halnes, Geir; Østby, Ivar; Pettersen, Klas; Omholt, Stig W; Einevoll, Gaute Tomas.
An electrodiffusive model for neuronal and astrocytic ion concentration dynamics. International Conference on Cognitive Neurodynamics; 2013-06-15
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38 Halnes, Geir; Østby, Ivar; Pettersen, Klas; Omholt, Stig W; Einevoll, Gaute Tomas.
An electrodiffusive model for neuronal and astrocytic ion concentration dynamics. INCF workshop on Multiscale modelling; 2013-10-04
NMBU Untitled
 
39 Halnes, Geir; Østby, Ivar; Pettersen, Klas; Omholt, Stig W; Einevoll, Gaute Tomas.
Electrodiffusive Model for Astrocytic and Neuronal Ion Concentration Dynamics. PloS Computational Biology 2013 ;Volum 9.(12)
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40 Halnes, Geir; Østby, Ivar; Pettersen, Klas; Omholt, Stig W; Einevoll, Gaute Tomas.
Electrodiffusive model for neuronal and astrocytic ion concentration dynamics. CNS*2013; 2013-07-14 - 2013-07-16
NMBU Untitled
 
41 Helgeland, Hanna.
Characterization of genes involved in carotenoid metabolism in Atlantic salmon. Universitetet for miljø- og biovitenskap 2013 (ISBN 978-82-575-1109-8) ;Volum 2013.41 s. Philosophiae Doctor (PhD) Thesis(06)
NMBU Untitled
 
42 Hunter, Peter; Chapman, T.; Coveney, PV; de Bono, Bernard; Diaz, V; Fenner, J; Frangi, Alejandro F.; Harris, Peter; Hose, R; Kohl, Peter; Lawford, Pat; McCormack, Keith; Mendes, M; Omholt, Stig W; Quarteroni, A; Shublaq, N; Skår, John; Stroetmann, K; Tegner, Jesper; Thomas, SR; Tollis, I; Tsamardinos, I; van Beek, Johannes H.G.M.; Viceconti, M.
A vision and strategy for the virtual physiological human: 2012 update. Interface Focus 2013 ;Volum 3.(2) s. -
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43 Kerty, Emilia; Heuser, Kjell; Indahl, Ulf Geir; Berg, Paul Ragnar; Nakken, Sigve; Lien, Sigbjørn; Omholt, Stig W; Ottersen, Ole Petter; Nagelhus, Erlend Arnulf.
Is the brain water channel aquaporin-4 a pathogenetic factor in idiopathic intracranial hypertension? Results from a combined clinical and genetic study in a Norwegian cohort. Acta Ophthalmologica 2013 ;Volum 91.(1) s. 88-91
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44 Martens, Harald; Tøndel, Kristin; Wu, Tim; Omholt, Stig W.
What does my model really do, - how can I improve it and speed it up, - what are its best parameter values, and how sure can I be about all of this?. Scandinavian Symposium on Chemometrics; 2013-06-01 - 2013-06-02
NOFIMA UiO NMBU Untitled
 
45 Martens, Harald; Tøndel, Kristin; Wu, Tim; Omholt, Stig W.
What does my model really do, - how can I improve it and speed it up, - what are its best parameter values, and how sure can I be about all of this?. Mathematical Methods and Modeling of Biophysical Phenomena; 2013-03-04 - 2013-03-08
NOFIMA NTNU NMBU Untitled
 
46 Nordbø, Øyvind.
Constructing and exploring the parameter-to-phenotype map of the passively inflated ventricle. Universitetet for miljø- og biovitenskap 2013 (ISBN 978-82-575-1137-1) ;Volum 2013.31 s. Philosophiae Doctor (PhD) Thesis(36)
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47 Omholt, Stig W.
Bridging the genotype-phenotype gap: what does it take?. ICSU bio-unions satellite symposium; 2013-07-28
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48 Omholt, Stig W.
Den digitale laksen: nøkkelen til både mer børs og mer katedral?. Mat fra havet - Norges muligheter; 2013-01-30
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49 Omholt, Stig W.
From sequence to consequence. FSSB'13; 2013-03-20
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50 Omholt, Stig W.
From sequence to consequence and back. Progress in Biophysics and Molecular Biology 2013 ;Volum 111.(2-3) s. 75-82
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