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1 Iveland, Tobias Solli; Hagen, Lars; Sharma, Animesh; Sousa, Mirta; Sarno, Antonio; Kristian Lied, Wollen; Liabakk, Nina-Beate; Slupphaug, Geir.
HDACi Mediate UNG2 Depletion, Dysregulated Genomic Uracil and Altered Expression of Oncoproteins and Tumor Suppressors in B- And T-cell Lines. Journal of Translational Medicine 2020 ;Volum 18.
NTNU Untitled
2 Coron, Abba Elizabeth; Fonseca, Davi de Miranda; Sharma, Animesh; Slupphaug, Geir; Rokstad, Anne Mari A.; Strand, Berit Løkensgard.
Elucidating host responses towards alginate microspheres using proteomics. Scandinavian Society for Biomaterials 2019 Conference; 2019-06-12 - 2019-06-14
NTNU Untitled
3 Søgaard, Caroline Krogh; Nepal, Anala; Petrovic, Voin; Sharma, Animesh; Liabakk, Nina-Beate; Steigedal, Tonje S.; Otterlei, Marit.
Targeting the non-canonical roles of PCNA modifies and increases the response to targeted anti-cancer therapy. OncoTarget 2019 ;Volum 10.(68) s. 7185-7197
NTNU STO Untitled
4 Toraskar, Jimita Prashant; Norvoll Magnussen, Synnøve; Hagen, Lars; Sharma, Animesh; Hoang, Linh; Bjørkøy, Geir; Svineng, Gunbjørg; Steigedal, Tonje S..
A Novel Truncated Form of Nephronectin Is Present in Small Extracellular Vesicles Isolated from 66cl4 Cells. Journal of Proteome Research 2019 ;Volum 18.(3) s. 1237-1247
NTNU STO UiT Untitled
5 Coron, Abba Elizabeth; Fonseca, Davi de Miranda; Sharma, Animesh; Slupphaug, Geir; Strand, Berit Løkensgard; Rokstad, Anne Mari.
Identification of adsorbing human plasma proteins on alginate gel beads. BRG Capsule workshop 2018; 2018-09-17 - 2018-09-21
NTNU Untitled
6 Coron, Abba Elizabeth; Fonseca, Davi de Miranda; Sharma, Animesh; Slupphaug, Geir; Strand, Berit Løkensgard; Rokstad, Anne Mari.
Identification of adsorbing human plasma proteins on alginate gel beads. Nordic Proteomics Conference; 2018-04-18 - 2018-04-20
NTNU STO Untitled
7 Phuyal, Santosh; Kasem, Mayes; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda; Vebraite, Vaineta; Shaposhnikov, Sergey; Slupphaug, Geir; Skaug, Vidar; Zienolddiny, Shanbeh.
Characterization of the proteome and lipidome profiles of human lung cells after low dose and chronic exposure to multiwalled carbon nanotubes. Nanotoxicology 2018 ;Volum 12.(2) s. 138-152
8 Slupphaug, Geir; Wollen Steen, Kristian; Rabe, Renana; Hagen, Lars; Aas, Per Arne; Sharma, Animesh; Vuk, Palibrk; Bjørås, Magnar; Mosammaparast, Nima; Fonseca, Davi de Miranda; Vågbø, Cathrine Broberg.
A role of ASCC3 in the quality control of methylated mRNA. EMBO Workshop - From Epigenome towards Epitranscriptome in Cell Fate Choice; 2018-10-14 - 2018-10-17
NTNU Untitled
9 Souza, Rodrigo W. A.; Alves, Christiano R. R.; Medeiros, Alessandra; Rolim, Natale Pinheiro Lage; Silva, Gustavo Jose Justo; Moreira, Jose Bianco Nascimento; Alves, Marcia Netto Magalhaes; Wohlwend, Martin; Gebriel, Mohammed; Hagen, Lars; Sharma, Animesh; Koch, Lauren G.; Britton, Steven L.; Slupphaug, Geir; Wisløff, Ulrik; Brum, Patricia C..
Differential regulation of cysteine oxidative post-translational modifications in high and low aerobic capacity. Scientific Reports 2018 ;Volum 8.(1) s. -
NTNU Untitled
10 Zhao, Chun-Mei; Rabben, Hanne-Line; Zhu, Yanping; Olsen, Magnus Kringstad; Wang, Zhiqiang; Hao, Yanpeng; Cai, Xing; Fonseca, Davi de Miranda; Sharma, Animesh; Li, Mingna; Zhihong, Zhang; Slupphaug, Geir; Wang, Timothy Cragin; Chen, Duan.
390 - A New Treatment for Pancreatic Cancer: Targeting Nervecancer Cell Crosstalk. Gastroenterology 2018 ;Volum 154.
NTNU STO Untitled
11 Bjørås, Karine; Sousa, Mirta; Sharma, Animesh; Fonseca, Davi de Miranda; Søgaard, Caroline Danielsen; Bjørås, Magnar; Otterlei, Marit.
Monitoring of the spatial and temporal dynamics of BER/SSBR pathway proteins, including MYH, UNG2, MPG, NTH1 and NEIL1-3, during DNA replication. Nucleic Acids Research 2017 ;Volum 45.(14) s. 8291-8301
NTNU OUS UiO Untitled
12 Gederaas, Odrun Arna; Sharma, Animesh; Bogoeva, Vanya; Mbarak, Saide; Kanamazina, Yusuf; Sporsheim, Bjørnar; Høgset, Anders; Slupphaug, Geir; Hagen, Lars.
The proteome of endosomes after Bleomycine-mediated photochemical internalization on rat bladder cancer cells. 16th International Photodynamic Association World Congress; 2017-06-08 - 2017-06-13
NTNU Untitled
13 Petrovic, Voin; Olaisen, Camilla; Sharma, Animesh; Nepal, Anala; Bugge, Steffen; Sundby, Eirik; Hoff, Bård Helge; Slupphaug, Geir; Otterlei, Marit.
Changes in cellular signaling proteins in extracts from A549, H460, and U2OS cells treated with cisplatin or docetaxel. Data in Brief 2017 ;Volum 12. s. 18-21
NTNU Untitled
14 Petrovic, Voin; Olaisen, Camilla; Sharma, Animesh; Nepal, Anala; Bugge, Steffen; Sundby, Eirik; Hoff, Bård Helge; Slupphaug, Geir; Otterlei, Marit.
On-column trypsinization allows for re-use of matrix in modified multiplexed inhibitor beads assay. Analytical Biochemistry 2017 ;Volum 523. s. 10-16
NTNU Untitled
15 Pinho, Maria; Scrimgeour, Nathan Robert; Stølen, Tomas; Garten, Karin; Sharma, Animesh; Fonseca, Davi de Miranda; Smith, Godfrey L; Høydal, Morten.
Modeling of cardiac ischaemia and reperfusion injury: a human-based in vitro model using iPS-derived cardiomyocytes. European Heart Journal 2017 ;Volum 38.(1) Suppl. 1 s. 229-230
NTNU Untitled
16 Zatula, Alexey; Dikic, Aida; Mulder, Teska Celine; Sharma, Animesh; Vågbø, Cathrine Broberg; Sousa, Mirta; Waage, Anders; Slupphaug, Geir.
Proteome alterations associated with transformation of multiple myeloma to secondary plasma cell leukemia. OncoTarget 2017 ;Volum 8.(12) s. 19427-19442
NTNU STO Untitled
17 Zienolddiny, Shanbeh; Phuyal, Santosh; Kasem, Mayes; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda; Vebraite, Vaineta; Shaposhnikov, Sergey.
Toxicoproteomic effects of carbon nanotubes on chronically exposed human lung cells. Toxicology Letters 2017 ;Volum 280. Suppl. 1 s. S141-
18 Helander, Linda; Sharma, Animesh; Krokan, Hans Einar; Plaetzer, Kristjan; Krammer, Barbara; Tortik, Nicole; Gederaas, Odrun Arna; Slupphaug, Geir; Hagen, Lars.
Photodynamic treatment with hexyl-aminolevulinate mediates reversible thiol oxidation in core oxidative stress signaling proteins. Molecular Biosystems 2016
NTNU Untitled
19 Sharma, Animesh; Kusnierczyk, Anna; Vågbø, Cathrine Broberg; Fonseca, Davi de Miranda; Slupphaug, Geir.
PROMEC: Services within Proteomics and DNA/RNA-modomics. Seminar for staff at the future Faculty of Medicine and Health Sciences; 2016-11-10 - 2016-11-11
NTNU Untitled
20 Skarpengland, Tonje; Dahl, Tuva Børresdatter; Skjelland, Mona; Scheffler, Katja; Sousa, Mirta; Gregersen, Ida; Kusnierczyk, Anna; Sharma, Animesh; Slupphaug, Geir; Eide, Lars; Segers, Filip; Skagen, Karolina Ryeng; Dahl, Christen Peder; Russell, David; Folkersen, Lasse; Krohg-Sørensen, Kirsten; Holm, Sverre; Bjørås, Magnar; Aukrust, Pål; Halvorsen, Bente.
Enhanced base excision repair capacity in carotid atherosclerosis may protect nuclear DNA but not mitochondrial DNA. Free Radical Biology & Medicine 2016 ;Volum 97. s. 386-397
NTNU OUS RS UiO Untitled
21 Slupphaug, Geir; Steen, Kristian Wollen; Hagen, Lars; Aas, Per Arne; Sharma, Animesh; Vågbø, Cathrine Broberg; Palibrk, Vuk; Bjørås, Magnar; Fonseca, Davi de Miranda.
MMS-induced modifications in mRNA and potential roles of ASCC3/ALKBH3. The 10th International 3R (Replication, recombination and repair) Symposium, Matsue, Japan; 2016-11-13 - 2016-11-17
NTNU Untitled
22 Sharma, Animesh; Steven, Lewis; Dahiya, Gurvinder; Slupphaug, Geir.
MS Data Analysis with a Touch of Spark. EUPA2015; 2015-06-23 - 2015-06-28
NTNU Untitled
23 Shojaei Moghadam, Morteza; Albersmeier, Andreas; Sharma, Animesh; Winkler, Anika; Cimmino, Lorenzo; Hohmann-Marriott, Martin Frank; Kalinowski, Jörn; Rückert, Christian; Wentzel, Alexander; Lale, Rahmi.
Omics approaches for identification of gene candidate(s) encoding extracellular laccase like multicopper oxidase from Psychrobacter sp. P11F6 Isolated from marine arctic environment. Microbial Genomics & Metagenomics Workshop; 2015-09-14 - 2015-09-18
24 Zub, Kamila; Sousa, Mirta; Sarno, Antonio; Sharma, Animesh; Dikic, Aida; Rao, Shalini; Young, Clifford; Aas, Per Arne; Ericsson, Ida; Sundan, Anders; Jensen, Ole Nørregaard; Slupphaug, Geir.
Modulation of cell metabolic pathways and oxidative stress signaling contribute to acquired Melphalan resistance in multiple myeloma cells. PLOS ONE 2015 ;Volum 10.(3)
NTNU Untitled
25 Hagen, Lars; Sharma, Animesh; Aas, Per Arne; Slupphaug, Geir.
Off-target responses in the HeLa proteome subsequent to transient plasmid-mediated transfection. Biochimica et Biophysica Acta - Proteins and Proteomics 2014 ;Volum 1854.(1) s. 84-90
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26 Zatula, Alexey; Demirovic, Aida; Sharma, Animesh; Sousa, Mirta; Sundan, Anders; Slupphaug, Geir.
Biomarker discovery and subtype classification within Multiple Myeloma by Super-SILAC. 2014 Nordic Proteomics Conference; 2014-03-11 - 2014-03-13
NTNU Untitled
27 Sridhar, Settu; Sharma, Animesh; Kongshaug, Heidi; Nilsen, Frank; Jonassen, Inge.
Whole genome sequencing of the fish pathogen Francisella noatunensis subsp. orientalis Toba04 gives novel insights into Francisella evolution and pathogenecity. BMC Genomics 2012 ;Volum 13.
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28 Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin; Gregers, Tone Fredsvik; Rounge, Trine Ballestad; Paulsen, Jonas; Solbakken, Monica Hongrø; Sharma, Animesh; Wetten, Ola Frang; Lanzén, Anders; Winer, Roger; Knight, James; Vogel, Jan-Hinnerk; Aken, Bronwen; Andersen, Øivind; Lagesen, Karin; Tooming-Klunderud, Ave; Edvardsen, Rolf; Kirubakaran, G. Tina; Espelund, Mari; Nepal, Chirag; Previti, A. Christopher; Karlsen, Bård Ove; Moum, Truls; Skage, Morten; Berg, Paul Ragnar; Gjøen, Tor; Kuhl, Heiner; Thorsen, Jim; Malde, Ketil; Reinhardt, Richard; Du, Lei; Johansen, Steinar Daae; Searle, Steve; Lien, Sigbjørn; Nilsen, Frank; Jonassen, Inge; Omholt, Stig W; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd.
The genome sequence of Atlantic cod reveals a unique immune system. Nature 2011 ;Volum 477.(7363) s. 207-210
29 Kamil, Atif; Falk, Knut; Sharma, Animesh; Raae, Arnt Johan; Berven, Frode; Koppang, Erling Olaf; Hordvik, Ivar.
A monoclonal antibody distinguishes between two IgM heavy chain isotypes in Atlantic salmon and brown trout: Protein characterization, 3D modeling and epitope mapping. Molecular Immunology 2011
30 Sharma, Animesh; Hugdahl, Kenneth; Specht, Karsten.
Meta analysis of language data using Machine Learning. Human Brain Mapping; 2011-06-26 - 2011-06-30
31 Tadiso, Tariku Markos; Sharma, Animesh; Hordvik, Ivar.
Analysis of polymeric immunoglobulin receptor- and CD300-like molecules from Atlantic salmon. Molecular Immunology 2011 ;Volum 49.(3) s. 462-473
UiB Untitled
32 Balzer, Susanne; Malde, Ketil; Lanzén, Anders; Sharma, Animesh; Jonassen, Inge.
Characteristics of 454 pyrosequencing data-enabling realistic simulation with flowsim. Bioinformatics 2010 ;Volum 26.(18) s. i420-i425
33 Joshi, Mohan; Sharma, Animesh; Kant, Sashi; Birah, Ajanta; Gupta, Gorakh Prasad; Khan, Sharik R.; Bhatnagar, Rakesh; Bhatnagar, Nirupama.
An Insecticidal GroEL Protein with Chitin Binding Activity from Xenorhabdus nematophila. Journal of Biological Chemistry 2008
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34 Pal, Nikhil Ranja; Sharma, Animesh; Sanadhya, Somitra Kumar.
Deriving meaningful rules from gene expression data for classification. Journal of Intelligent & Fuzzy Systems 2008 ;Volum 19.(3) s. 171-180
UiB Untitled
35 Pal, Nikhil; Aguan, Kripamoy; Sharma, Animesh; Amari, Shun-ichi.
Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clustering. BMC Bioinformatics 2007 ;Volum 8.(5)