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2019
1 Parsons, H.T.; Stevens, T.J.; McFarlane, H.E.; Vidal-Melgosa, Silvia; Griss, Johannes; Lawrence, Nicola; Butler, Richard; Sousa, Mirta; Salemi, Michelle; Willats, William G.T.; Petzold, Christopher J; Heazlewood, Joshua; Lilley, Kathryn S..
Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. The Plant Cell 2019 ;Volum 31.(9) s. 2010-2034
NTNU Untitled
 
2 Sarno, Antonio; Lundbæk, Marie Benner; Liabakk, Nina-Beate; Aas, Per Arne; Mjelle, Robin; Hagen, Lars; Sousa, Mirta; Krokan, Hans Einar; Kavli, Bodil Merete.
Uracil-DNA glycosylase UNG1 isoform variant supports class switch recombination and repairs nuclear genomic uracil. Nucleic Acids Research 2019 ;Volum 47.(9) s. 4569-4585
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2017
3 Bjørås, Karine; Sousa, Mirta; Sharma, Animesh; Fonseca, Davi de Miranda; Søgaard, Caroline Danielsen; Bjørås, Magnar; Otterlei, Marit.
Monitoring of the spatial and temporal dynamics of BER/SSBR pathway proteins, including MYH, UNG2, MPG, NTH1 and NEIL1-3, during DNA replication. Nucleic Acids Research 2017 ;Volum 45.(14) s. 8291-8301
NTNU OUS UiO Untitled
 
4 Rydning, Siri Lynne; Backe, Paul Hoff; Sousa, Mirta; Iqbal, Zafar; Øye, Ane-Marte; Sheng, Ying; Yang, Mingyi; Lin, Xiaolin; Slupphaug, Geir; Nordenmark, Tonje Haug; Vigeland, Magnus Dehli; Bjørås, Magnar; Tallaksen, Chantal; Selmer, Kaja Kristine.
Corrigendum: Novel UCHL1 mutations reveal new insights into ubiquitin processing. Human Molecular Genetics 2017 ;Volum 26.(6) s. 1217-1218
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5 Rydning, Siri Lynne; Backe, Paul Hoff; Sousa, Mirta; Iqbal, Zafar; Øye, Ane-Marte; Sheng, Ying; Yang, Mingyi; Lin, Xiaolin; Slupphaug, Geir; Nordenmark, Tonje Haug; Vigeland, Magnus Dehli; Bjørås, Magnar; Tallaksen, Chantal; Selmer, Kaja Kristine.
Novel UCHL1 mutations reveal new insights into ubiquitin processing. Human Molecular Genetics 2017 ;Volum 26.(6) s. 1031-1040
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6 Sousa, Mirta; Bjørås, Karine; Hanssen-Bauer, Audun; Solvang-Garten, Karin; Otterlei, Marit.
P38 MAPK signaling and phosphorylations in the BRCT1 domain regulate XRCC1 recruitment to sites of DNA damage. Scientific Reports 2017 ;Volum 7.(1)
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7 Vange, Pål; Bruland, Torunn; Doseth, Berit; Fossmark, Reidar; Sousa, Mirta; Beisvag, Vidar; Sørdal, Øystein Finset; Qvigstad, Gunnar; Waldum, Helge; Sandvik, Arne Kristian; Bakke, Ingunn.
The cytoprotective protein clusterin is overexpressed in hypergastrinemic rodent models of oxyntic preneoplasia and promotes gastric cancer cell survival. PLOS ONE 2017 ;Volum 12.(9)
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8 Zatula, Alexey; Dikic, Aida; Mulder, Teska Celine; Sharma, Animesh; Vågbø, Cathrine Broberg; Sousa, Mirta; Waage, Anders; Slupphaug, Geir.
Proteome alterations associated with transformation of multiple myeloma to secondary plasma cell leukemia. OncoTarget 2017 ;Volum 8.(12) s. 19427-19442
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2016
9 Cambri, Geison; Sousa, Mirta; Fonseca, Davi de Miranda; Marchini, Fabricio K.; Meira da Silveira, Joana Lea; Paba, Jaime.
Analysis of the Biotechnological Potential of a Lentinus crinitus Isolate in the Light of Its Secretome. Journal of Proteome Research 2016 ;Volum 15.(12) s. 4557-4568
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10 Krokan, Hans Einar; Slupphaug, Geir; Sætrom, Pål; Sarno, Antonio; Galashevskaya, Anastasia; Lundbæk, Marie Benner; Aas, Per Arne; Krokan, Ruth Haaland; Liabakk, Nina-Beate; Pettersen, Henrik Sahlin; Sousa, Mirta; Doseth, Berit; Kavli, Bodil Merete.
Genomic uracil - Important carcinogenic mutagen but normal intermediate in adaptive immunity. Eurotox 2016; 2016-09-04
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11 Skarpengland, Tonje; Dahl, Tuva Børresdatter; Skjelland, Mona; Scheffler, Katja; Sousa, Mirta; Gregersen, Ida; Kusnierczyk, Anna; Sharma, Animesh; Slupphaug, Geir; Eide, Lars; Segers, Filip; Skagen, Karolina Ryeng; Dahl, Christen Peder; Russell, David; Folkersen, Lasse; Krohg-Sørensen, Kirsten; Holm, Sverre; Bjørås, Magnar; Aukrust, Pål; Halvorsen, Bente.
Enhanced base excision repair capacity in carotid atherosclerosis may protect nuclear DNA but not mitochondrial DNA. Free Radical Biology & Medicine 2016 ;Volum 97. s. 386-397
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12 Sousa, Mirta.
Principles of targeted proteomics. Myeloma group meeting; 2016-03-31 - 2016-03-31
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13 Vange, Pål; Bruland, Torunn; Doseth, Berit; Sousa, Mirta; Sørdal, Øystein Finset; Qvigstad, Gunnar; Fossmark, Reidar; Waldum, Helge; Sandvik, Arne Kristian; Bakke, Ingunn.
The anti-apoptotic factor clusterin is involved in hypergastrinemia-induced remodeling of the gastric oxyntic mucosa. United European Gastroenterology Week 2016; 2016-10-17 - 2016-10-19
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2015
14 Pettersen, Henrik Sahlin; Galashevskaya, Anastasia; Doseth, Berit; Sousa, Mirta; Sarno, Antonio; Visnes, Torkild; Aas, Per Arne; Liabakk, Nina-Beate; Slupphaug, Geir; Sætrom, Pål; Kavli, Bodil Merete; Krokan, Hans Einar.
AID expression in B-cell lymphomas causes accumulation of genomic uracil and a distinct AID mutational signature. DNA Repair 2015 ;Volum 25. s. 60-71
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15 Rolim, Natale Pinheiro Lage; Skårdal, Kristine; Høydal, Morten; Sousa, Mirta; Malmo, Vegard; Skrove, Guri Kaurstad; Ingul, Charlotte Bjørk; Hansen, Harald Edvard Mølmen; Alves, Marcia Netto Magalhaes; Thuen, Marte; Haraldseth, Olav; Brum, Patricia Chakur; Slupphaug, Geir; Loennechen, Jan Pål; Stølen, Tomas; Wisløff, Ulrik.
Aerobic interval training reduces inducible ventricular arrhytmias in diabetic mice after myocardial infarction.. Basic Research in Cardiology 2015 ;Volum 110.(44)
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16 Sousa, Mirta.
Principles of targeted proteomics and its applications in cancer research. Norsk Biokjemisk Selskap (NBS) 2015; 2015-03-03 - 2015-03-04
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17 Sousa, Mirta.
Protein Quantification Through Targeted Proteomics. Institutt dagen - IKM; 2015-04-16 - 2015-04-16
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18 Weaver, Lane J; Sousa, Mirta; Wang, George; Baidoo, Edward; Petzold, Christopher J; Keasling, Jay D..
A kinetic-based approach to understanding heterologous mevalonate pathway function in E. coli. Biotechnology and Bioengineering 2015 ;Volum 112.(1) s. 111-119
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19 Zub, Kamila; Sousa, Mirta; Sarno, Antonio; Sharma, Animesh; Dikic, Aida; Rao, Shalini; Young, Clifford; Aas, Per Arne; Ericsson, Ida; Sundan, Anders; Jensen, Ole Nørregaard; Slupphaug, Geir.
Modulation of cell metabolic pathways and oxidative stress signaling contribute to acquired Melphalan resistance in multiple myeloma cells. PLOS ONE 2015 ;Volum 10.(3)
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2014
20 Batth, Tanveer S; Singh, Pragya; Ramakrishnan, Vikram R; Sousa, Mirta; Chan, Leanne Jade; Tran, Huu M; Luning, Eric G; Pan, Eva H; Vuu, Khanh M; Keasling, Jay D; Adams, Paul D; Petzold, Christopher J.
A targeted proteomics toolkit for high-throughput absolute quantification of Escherichia coli proteins. Metabolic Engineering 2014 ;Volum 26C. s. 48-56
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21 Gebriel, Mohammed; Sousa, Mirta; Slupphaug, Geir.
Global Proteomic monitoring of Phosphoproteome dynamics during rotenone-induced apoptosis in HeLa cells. NBS Contact Meeting 2014; 2014-01-23 - 2014-01-26
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22 Gebriel, Mohammed; Zatula, Alexey; Sousa, Mirta; Hagen, Lars; Slupphaug, Geir.
From tissue to protein networks in (a bit more than) two hours: an ultrafast and a straightforward single-run LC-MS/MS approach for comprehensive proteome analyses. NBS Contact Meeting 2014; 2014-01-23 - 2014-01-26
NTNU UIS Untitled
 
23 Singh, Pragya; Batth, Tanveer S; Ramakrishnan, Vikram R; Sousa, Mirta; Chan, Leanne Jade; Keasling, Jay D; Paul D, Adams; Petzold, Christopher J.
An SRM toolkit for “faster-better-cheaper” absolute quantification of Escherichia coli pathway proteins. The American Society of Mass Spectrometry (ASMS) - 62nd Annual Conference; 2014-06-15 - 2014-06-19
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24 Zatula, Alexey; Demirovic, Aida; Sharma, Animesh; Sousa, Mirta; Sundan, Anders; Slupphaug, Geir.
Biomarker discovery and subtype classification within Multiple Myeloma by Super-SILAC. 2014 Nordic Proteomics Conference; 2014-03-11 - 2014-03-13
NTNU Untitled
 
2013
25 Johannessen, Helene; Kodama, Yosuke; Zhao, Chun-Mei; Sousa, Mirta; Slupphaug, Geir; Kulseng, Bård Eirik; Chen, Duan.
Eating Behavior and Glucagon-Like Peptide-1-Producing Cells in Interposed Ileum and Pancreatic Islets in Rats Subjected to Ileal Interposition Associated with Sleeve Gastrectomy. Obesity Surgery 2013 ;Volum 23.(1) s. 39-49
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26 Johnsen, Anne Berit; Rolim, Natale Pinheiro Lage; Stølen, Tomas; Alves, Marcia; Sousa, Mirta; Slupphaug, Geir; Britton, Steven L; Koch, Lauren G; Smith, Godfrey L; Wisløff, Ulrik; Høydal, Morten Andre.
Atrial Myocyte Function and Ca2+ Handling Is Associated with Inborn Aerobic Capacity. PLOS ONE 2013 ;Volum 8.(10) s. -
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27 Parsons, Harriet; Petzold, Christopher J; Verhertbruggen, Yves; Lao, Jeemeng; Sousa, Mirta; Scheller, Henrik; Heazlewood, Joshua.
Separation of the Arabidopsis secretory pathway. 2013 JBEI Annual Summer Retreat; 2013-06-26 - 2013-06-28
NTNU Untitled
 
28 Sousa, Mirta; Batth, Tanveer S; Singh, Pragya; M Tran, Huu; Ramakrishnan, Vikram R; Keasling, Jay D; Adams, Paul D; Petzold, Christopher J.
Targeted Proteomics of Metabolically Engineered E. coli. 2013 JBEI Annual Summer Retreat; 2013-06-26 - 2013-06-28
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29 Sousa, Mirta; Batth, Tanveer S; Singh, Pragya; Ramakrishnan, Vikram R; Keasling, Jay D; Adams, Paul D; Petzold, Christopher J.
Targeted Proteomics of Metabolically Engineered E. coli. Industry Advisory Committee (IAC) and Scientific Advisory Committee (SAC) Meetings; 2013-06-12 - 2013-06-14
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30 Sousa, Mirta; Slupphaug, Geir.
Biomarker discovery in multiple myeloma by targeted absolute quantitative proteomics. Trent Northen Group Meeting; 2013-03-05 - 2013-03-05
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31 Sousa, Mirta; Slupphaug, Geir.
Targeted Quantitation of Proteins by Mass Spectrometry. Monday Meeting - IKM; 2013-11-25 - 2013-11-25
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32 Sousa, Mirta; Zub, Kamila Anna; Aas, Per Arne; Hanssen-Bauer, Audun; Demirovic, Aida; Sarno, Antonio; Tian, Erming; Liabakk, Nina-Beate; Slupphaug, Geir.
An inverse switch in DNA base excision and strand break repair contributes to melphalan resistance in multiple myeloma cells. PLOS ONE 2013 ;Volum 8.(2) s. -
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2012
33 Sousa, Mirta.
Melphalan resistance in myeloma cells. Onsdag møte; 2012-04-25 - 2012-04-25
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2011
34 Baglo, Yan; Sousa, Mirta; Slupphaug, Geir; Hagen, Lars; Håvåg, Sissel; Helander, Linda; Zub, Kamila; Krokan, Hans Einar; Gederaas, Odrun Arna.
Photodynamic therapy with hexyl aminolevulinate induces carbonylation, posttranslational modifications and changed expression of proteins in cell survival and cell death pathways. Photochemical and Photobiological Sciences 2011 ;Volum 10.(7) s. 1137-1145
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35 Baglo, Yan; Sousa, Mirta; Slupphaug, Geir; Hagen, Lars; Håvåg, Sissel; Helander, Linda; Zub, Kamila; Krokan, Hans Einar; Gederaas, Odrun Arna.
Photodynamic therapy with hexyl aminolevulinate induces carbonylation, posttranslational modifications and changed expression of proteins in cell survival and cell death pathways. Cancer Proteomics 2011, European Molecular Biology Organization; 2011-06-20 - 2011-06-23
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36 Sousa, Mirta.
Signaling response and DNA repair pathways involved in acquired melphalan resistance in myeloma cells. Monday meeting - IKM; 2011-09-19 - 2011-09-19
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37 Sousa, Mirta; Steen, Kristian Wollen; Hagen, Lars; Slupphaug, Geir.
Antibody cross-linking and target elution protocols used for immunoprecipitation significantly modulate signal-to noise ratio in downstream 2D-PAGE analysis. Proteome Science 2011 ;Volum 9. s. -
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38 Sousa, Mirta; Zub, Kamila; Aas, Per Arne; Tian, Erming; Liabakk, Nina-Beate; Young, Clifford; Jensen, Ole Nørregaard; Slupphaug, Geir.
Switch in ATM/ATR expression and up-regulation of NHEJ proteins contribute to acquired melphalan resistance in RPMI8226 myeloma cells. 2nd nordic proteomics symposium; 2011-11-27 - 2011-11-29
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39 Sousa, Mirta; Zub, Kamila; Aas, Per Arne; Young, Clifford; Tian, Erming; Jensen, Ole Nørregaard; Slupphaug, Geir.
Proteomics screening identifies AKR1C proteins as potential markers for resistance in melphalan resistant RPMI8226-LR5 myeloma cells. 4th EU-USA conference on DNA base damage and repair; 2011-05-18 - 2011-05-22
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2010
40 Baglo, Yan; Sousa, Mirta; Hagen, Lars; Helander, Linda; Slupphaug, Geir; Gederaas, Odrun Arna.
proteomic and bioinformatic analysis of photodynamic effects in rat bladder cancer cell associated with hexyl aminolevulinate. the 1st annual BioStruct conference 2010; 2010-08-26 - 2010-08-29
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41 Hagen, Lars; Kavli, Bodil Merete; Sousa, Mirta; Torseth, Kathrin; Slupphaug, Geir.
Post translational modifications of the human DNA repair protein uracil DNA glycosylase, UNG2. 6th Norwegian National Proteomics Meeting; 2010-12-09 - 2010-12-10
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42 Helander, Linda; Baglo, Yan; Hagen, Lars; Sousa, Mirta; Slupphaug, Geir; Gederaas, Odrun Arna.
Use of proteomic techniques within photodynamic therapy research. 6th Norwegian National Proteomics Meeting; 2010-12-09 - 2010-12-10
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43 Monsen, Vivi A Talstad; Sundheim, Ottar; Aas, Per Arne; Westbye, Marianne Pedersen; Sousa, Mirta; Slupphaug, Geir; Krokan, Hans Einar.
Divergent ß-hairpins determine double-strand versus single-strand substrate recognition of human AlkB-homologues 2 and 3. Nucleic Acids Research 2010 ;Volum 38.(19) s. 6447-6455
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44 Sousa, Mirta.
Multiple Myeloma. Monday meeting; 2010-10-25 - 2010-10-25
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45 Sousa, Mirta; Steen, Kristian Wollen; Hagen, Lars; Slupphaug, Geir.
Antibody crosslinking and target elution protocols used for immunoprecipitation significantly modulate signal-to noise ratio in downstream 2D-PAGE analysis. 6th Norwegian National Proteomics Meeting; 2010-12-09 - 2010-12-10
NTNU Untitled
 
46 Zub, Kamila; Sousa, Mirta; Aas, Per Arne; Young, Clifford; Tian, Erming; Johansen, Jostein; Hagen, Lars; Jensen, Ole Nørregaard; Slupphaug, Geir.
A proteomics and genomic approach to identify factors associated with melphalan resistance in multiple myeloma cells. 6th Norwegian National Proteomics Meeting; 2010-12-09 - 2010-12-10
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2009
47 Baglo, Yan; Sousa, Mirta; Håvåg, Sissel; Helander, Linda; Slupphaug, Geir; Krokan, Hans Einar; Gederaas, Odrun Arna.
Effects of photodynamic therapy on protein expression in cells. 13th congress of european society for photobiology and the 2nd conference of the european plataform for photodynamic medicine; 2009-09-05 - 2009-09-10
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48 Gilljam, Karin Margaretha; Feyzi, Emadoldin; Aas, Per Arne; Sousa, Mirta; Müller, Rebekka; Vågbø, Cathrine Broberg; Catterall, Tara; Liabakk, Nina-Beate; Slupphaug, Geir; Drabløs, Finn; Krokan, Hans Einar; Otterlei, Marit.
Identification of a novel, widespread, and functionally important PCNA-binding motif. Journal of Cell Biology 2009 ;Volum 186.(5) s. 645-654
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49 Gilljam, Karin Margaretha; Feyzi, Emadoldin; Aas, Per Arne; Westbye, Marianne; Sousa, Mirta; Müller, Rebekka; Catterall, Tara C; Vågbø, Cathrine Broberg; Liabakk, Nina-Beate; Slupphaug, Geir; Drabløs, Finn; Krokan, Hans Einar; Otterlei, Marit.
The human AlkB homologs 1,2 and 3, localisation and tentative functions. 2nd Erling Seeberg Symposium on DNA Repair; 2009-06-20 - 2009-06-25
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50 Sousa, Mirta; Tian, Erming; Hanssen-Bauer, Audun; Zub, Kamila; Banica, Ana; Slupphaug, Geir.
MBD4 is a candidate protein in development of drug resistance in multiple myeloma. The norwegian biochemical society 45th contact meeting; 2009-01-29 - 2009-02-01
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