Cristin

2018
1.	Konstantinidis, Ioannis; Sætrom, Pål; Fernandes, Jorge Manuel de Oliveira. Fast muscle hydroxymethylation patterns in wild and captive Nile tilapia (Oreochromis niloticus) provide insights into fish domestication. GIA2018: 5th International Symposium on Genomics in Aquaculture; 2018-03-21 - 2018-03-23 NORD NTNU Untitled
2017
2.	de rie, D; Abugesaissa, I; Alam, T; Arner, E; Ashoor, H; Åström, G; Babina, M; Bertin, N; Burroughs, AM; Carlisle, AJ; Daub, CO; Detmar, M; Daviatiiarov, R; Fort, A; Gebhard, C; Goldowitz, D; Guhl, S; Ha, TJ; Harschbager, J; Hasegawa, R; Hashimoto, K; Herlyn, M; Heutink, P; Hitchens, KJ; Hong, CC; Huang, E; Ishizu, Y; Kai, C; Kasukawa, T; Klinken, P; Lassmann, T; Lecellier, CH; Lee, W; Lizio, M; Makeev, V; Mathelier, Anthony; Medvededa, YA; Mejhert, N; Mungall, CJ; Noma, S; Ohshima, M; Okada-Hatakeyama, M; Persson, H; Rizzu, P; Roudnicky, F; Sætrom, Pål; Sato, H; Severin, J; Shin, JW; Swoboda, RK; Tarui, H; Toyoda, H; Vitting-Serup, K; Winterinham, L; Yamaguchi, Y; Yasuzawa, K; Yoneda, M; Yumoto, N; Zabierowsky, S; Zang, PG; Wells, CA; Summers, KM; Kawaii, H; Sandelin, A; Rehli, M; Hayashisaki, Y; Carninci, P; Forrest, ARR; de Hoon, MJL; De Hoon, Michiel J L. An integrated expression atlas of miRNAs and their promoters in human and mouse. Nature Biotechnology 2017 ;Volum 35.(9) s. 872-878 NTNU Untitled

3.	Hegre, Siv Anita; Klima, Antonin; Aas, Per Arne; Liabakk, Nina-Beate; Sætrom, Pål. Meta-Analysis of RNA expression identifies human cell-cycle genes. Keystone Symposia "Noncoding RNAs: From Disease to Targeted Therapeutics"; 2017-02-05 NTNU Untitled

4.	Hegre, Siv Anita; Samdal, Helle; Klima, Antonin; Stovner, Endre Bakken; Nørsett, Kristin; Aas, Per Arne; Liabakk, Nina-Beate; Sætrom, Pål. Long non-coding RNAs in epigenetic inheritance * Won Poster prize of 250 EUR at the EMBO\|EMBL Symposium. EMBO EMBL Symposium "The Non-Coding genome"; 2017-09-13 - 2017-09-16 NTNU Untitled

5.	Hegre, Siv Anita; Stovner, Endre Bakken; Sætrom, Pål. Find diffusely enriched chromatin domains in ChIP-seq data with epic. Keystone Symposia "Noncoding RNAs: From disease to targeted therapeutics"; 2017-02-05 - 2017-02-09 NTNU Untitled

6.	Konstantinidis, Ioannis; Fernandes, Jorge Manuel de Oliveria; Sætrom, Pål. The first hydroxymethylation map of fast muscle in Nile tilapia (Oreochromis niloticus). Aquaculture Europe 2017; 2017-10-17 - 2017-10-20 NORD NTNU Untitled

7.	Landfors, Miriam; Johansen, Jostein; Aronsen, Jan Magnus; Vågbø, Cathrine Broberg; Doré, Louis C.; He, Chuan; Sjaastad, Ivar; Sætrom, Pål; Fedorcsák, Péter; Dahl, John Arne; Aanes, Håvard; Fusser, Markus; Klungland, Arne. Genome-wide profiling of DNA 5-hydroxymethylcytosine during rat Sertoli cell maturation. Cell Discovery 2017 ;Volum 3. s. - BJORKNES NTNU OUS UiO Untitled

8.	Mjelle, Robin; Sellæg, Kjersti; Sætrom, Pål; Thommesen, Liv; Sjursen, Wenche; Hofsli, Eva. Identification of metastasis-associated microRNAs in serum from rectal cancer patients. OncoTarget 2017 ;Volum 8.(52) s. 90077-90089 NTNU STO Untitled

9.	Olsen, Lene Christin; O'Reilly, Kally; Liabakk, Nina-Beate; Witter, Menno; Sætrom, Pål. MicroRNAs contribute to postnatal development of laminar differences and neuronal subtypes in the rat medial entorhinal cortex. Brain Structure and Function 2017 ;Volum 222.(7) s. 3107-3126 NTNU Untitled

10.	Olsen, Maria Belland; Hildrestrand, Gunn Annette; Scheffler, Katja; Vinge, Leif Erik; Alfsnes, Katrine; Palibrk, Vuk; Wang, Junbai; Neurauter, Christine Gran; Gomez, Luisa Fernanda Luna; Johansen, Jostein; Øgaard, Jonas; Ohm, Ingrid Kristine; Slupphaug, Geir; Kusnierczyk, Anna; Fiane, Arnt E; Brorson, Sverre Henning; Zhang, Lili; Gullestad, Lars; Louch, William Edward; Iversen, Per Ole; Østlie, Ingunn; Klungland, Arne; Christensen, Geir Arve; Sjaastad, Ivar; Sætrom, Pål; Yndestad, Arne; Aukrust, Pål; Bjørås, Magnar; Finsen, Alexandra. NEIL3-Dependent Regulation of Cardiac Fibroblast Proliferation Prevents Myocardial Rupture. Cell reports 2017 ;Volum 18. s. 82-92 NTNU OUS UiO Untitled

11.	Skogholt, Anne Heidi; Ryeng, Einar; Erlandsen, Sten Even; Skorpen, Frank; Arentz Schønberg, Svanhild Margrethe; Sætrom, Pål. Gene expression differences between PAXgene and Tempus blood RNA tubes are highly reproducible between independent samples and biobanks. BMC Research Notes 2017 ;Volum 10.(136) s. - NTNU Untitled

12.	Voutila, Jon; Reebye, Vikash; Roberts, Thomas C.; Protopapa, Pantelitsa; Andrikakou, Pinelopi; Blakey, David C.; Habib, Robert; Huber, Hans; Sætrom, Pål; Rossi, John J.; Habib, Nagy A.. Development and mechanism of small activating RNA targeting CEBPA, a novel therapeutic in clinical trials for liver cancer. Molecular Therapy 2017 ;Volum 25.(12) s. 2705-2714 NTNU Untitled
2016
13.	Johansen, Jostein; Chawla, Konika; Olsen, Lene Christin; Sætrom, Pål. Bioinformatics Core Facility. Seminar for staff at the future Faculty of Medicine and Health Sciences; 2016-11-10 - 2016-11-11 NTNU Untitled

14.	Krokan, Hans Einar; Kavli, Bodil Merete; Pettersen, Henrik Sahlin; Sætrom, Pål; Galashevskaya, Anastasia; Sarno, Antonio; Aas, Per Arne; Doseth, Berit; Slupphaug, Geir. Genomic Uracil - Important carcinogenic mutagen but normal intermediate in adaptive immunity. The 10th International 3R (Replication, recombination and repair) Symposium, Matsue, Japan; 2016-11-13 - 2016-11-17 NTNU Untitled

15.	Krokan, Hans Einar; Pettersen, Henrik Sahlin; Mjelle, Robin; Hegre, Siv Anita; Sætrom, Pål; Drabløs, Finn Sverre; Sarno, Antonio; Galashevskaya, Anastasia; Aas, Per Arne; Liabakk, Nina-Beate; Doseth, Berit; Slupphaug, Geir; Kavli, Bodil Merete. REGULATION OF BASE EXCISION REPAIR – CANONICAL AND NON-CANONICAL PROCESSING OF GENOMIC URACIL. 10th International Multiconference on Bioinformatics of Genome Regulation and Structure\Systems Biology; 2016-08-29 - 2016-09-03 NTNU UiO Untitled

16.	Krokan, Hans Einar; Slupphaug, Geir; Sætrom, Pål; Sarno, Antonio; Galashevskaya, Anastasia; Lundbæk, Marie Benner; Aas, Per Arne; Krokan, Ruth Haaland; Liabakk, Nina-Beate; Pettersen, Henrik Sahlin; Sousa, Mirta; Doseth, Berit; Kavli, Bodil Merete. Genomic uracil - Important carcinogenic mutagen but normal intermediate in adaptive immunity. Eurotox 2016; 2016-09-04 NTNU Untitled

17.	Langkilde, Ane; Olsen, Lene Christin; Sætrom, Pål; Drabløs, Finn Sverre; Besenbacher, Søren; Raaby, Line; Johansen, Claus; Iversen, Lars. Pathway Analysis of Skin from Psoriasis Patients after Adalimumab Treatment Reveals New Early Events in the Anti-Inflammatory Mechanism of Anti-TNF-α. PLoS ONE 2016 ;Volum 11.(12) s. - NTNU Untitled

18.	Robles, Ana I.; Olsen, Karina Standahl; Tsui, Dana W.T.; Georgoulias, Vassilis; Creaney, Jenette; Dobra, Katalin; Vyberg, Mogens; Minato, Nagahiro; Anders, Robert A.; Børresen-Dale, Anne-Lise; Zhou, Jianwei; Sætrom, Pål; Nielsen, Boye Schnack; Kirschner, Michaela B.; Krokan, Hans Einar; Papadimitrakopoulou, Vassiliki; Tsamardinos, Ioannis; Røe, Oluf Dimitri. Excerpts from the 1st international NTNU symposium on current and future clinical biomarkers of cancer: innovation and implementation, June 16th and 17th 2016, Trondheim, Norway. Journal of Translational Medicine 2016 ;Volum 14:295. s. - HNT NTNU OUS UiT Untitled

19.	Røe, Oluf Dimitri; Mjelle, Robin; Sætrom, Pål; Andreassen, Trygve; Bathen, Tone Frost; Hveem, Kristian. Serum microRNAs/enriched pathways in lung cancer 1-4 years before diagnosis: A pilot study from the HUNT Biobank, Norway.. Journal of Clinical Oncology 2016 (34) Suppl. abstr 11539 NTNU Untitled

20.	Stracquadanio, Giovanni; Wang, Xuting; Wallace, Marsha D; Grawenda, Anna M.; Zhang, Ping; Hewitt, Juliet; Zeron-Medina, Jorge; Castro-Giner, Francesc; Tomlinson, Ian P; Goding, Colin R.; Cygan, Kamil J; Fairbrother, William G; Thomas, Laurent; Sætrom, Pål; Gemignani, Federica; Landi, Stefano; Schuster-Böckler, Benjamin; Bell, Douglas A; Bond, Gareth L.. The importance of p53 pathway genetics in inherited and somatic cancer genomes. Nature Reviews. Cancer 2016 ;Volum 16.(4) s. 251-265 NTNU Untitled

21.	Yoon, Sorah; Huang, Kai-Wen; Reebye, Vikash; Mintz, Paul; Tien, Yu-Wen; Lai, Hong-Shiee; Sætrom, Pål; Reccia, Isabella; Swiderski, Piotr; Armstrong, Brian; Jozwiak, Agnieszka; Spalding, Duncan; Jiao, Long; Habib, Nagy; Rossi, John J. Targeted Delivery of C/EBPα -saRNA by Pancreatic Ductal Adenocarcinoma-specific RNA Aptamers Inhibits Tumor Growth in Vivo. Molecular Therapy 2016 ;Volum 24.(6) s. 1106-1116 NTNU Untitled
2015
22.	Achar, Avinash; Sætrom, Pål. RNA motif discovery: a computational overview. Biology Direct 2015 ;Volum 10.(1) s. - NTNU Untitled

23.	Hansen, Maren Fridtjofsen; Johansen, Jostein; Bjørnevoll, Inga; Sylvander, Anna Elisabeth; Steinsbekk, Kristin Solum; Sætrom, Pål; Sandvik, Arne Kristian; Drabløs, Finn; Sjursen, Wenche. A novel POLE mutation associated with cancers of colon, pancreas, ovaries and small intestine. Familial Cancer 2015 ;Volum 14.(3) s. 437-448 NTNU STO Untitled

24.	Hansen, Maren Fridtjofsen; Johansen, Jostein; Bjørnevoll, Inga; Sylvander, Anna Elisabeth; Steinsbekk, Kristin Solum; Sætrom, Pål; Sandvik, Arne Kristian; Drabløs, Finn; Sjursen, Wenche. A novel POLE variant, identified by exome sequencing, causes colorectal- and extra-colonic cancers. Familial Cancer 2015 ;Volum 14.(1) s. 44-44 NTNU STO Untitled

25.	Mjelle, Robin; Hegre, Siv Anita; Aas, Per Arne; Slupphaug, Geir; Drabløs, Finn; Sætrom, Pål; Krokan, Hans Einar. Cell cycle regulation of human DNA repair and chromatin remodeling genes. DNA Repair 2015 ;Volum 30. s. 53-67 NTNU Untitled

26.	Pettersen, Henrik Sahlin; Galashevskaya, Anastasia; Doseth, Berit; Sousa, Mirta; Sarno, Antonio; Visnes, Torkild; Aas, Per Arne; Liabakk, Nina-Beate; Slupphaug, Geir; Sætrom, Pål; Kavli, Bodil Merete; Krokan, Hans Einar. AID expression in B-cell lymphomas causes accumulation of genomic uracil and a distinct AID mutational signature. DNA Repair 2015 ;Volum 25. s. 60-71 NTNU STO Untitled

27.	Simpson, Melanie Rae; Brede, Gaute; Johansen, Jostein; Johnsen, Roar; Storrø, Ola; Sætrom, Pål; Øien, Torbjørn. Human breast milk miRNA, maternal probiotic supplementation and atopic dermatitis in offspring. PLoS ONE 2015 ;Volum 10:e0143496.(12) NTNU Untitled

28.	Simpson, Melanie Rae; Brede, Gaute; Johansen, Jostein; Storrø, Ola; Johnsen, Roar; Sætrom, Pål; Øien, Torbjørn. Human breast milk miRNA, maternal probiotic supplementation and atopic dermatitis (oral presentation). 12th International Symposium on Milk Genomics and Human Health; 2015-10-26 - 2015-10-28 NTNU Untitled

29.	Simpson, Melanie Rae; Brede, Gaute; Johansen, Jostein; Storrø, Ola; Johnsen, Roar; Sætrom, Pål; Øien, Torbjørn. Human breast milk miRNA, maternal probiotics supplementation and atopic dermatitis in offspring (poster). 12th International Symposium on Milk Genomics and Human Health; 2015-10-26 - 2015-10-28 NTNU Untitled
2014
30.	Hansen, Maren Fridtjofsen; Johansen, Jostein; Bjørnevoll, Inga; Sylvander, Anna Elisabeth; Steinsbekk, Kristin Solum; Sætrom, Pål; Sandvik, Arne Kristian; Drabløs, Finn; Sjursen, Wenche. Using exome sequencing for identification of high-risk genetic variants in a family predisposed for colorectal cancer. COST Action BM1206 Meeting; 2014-09-04 - 2014-09-04 NTNU STO Untitled

31.	Johnsen, Ingvild Bjellmo; Løvstakken, Lasse; Åsvold, Bjørn Olav; Høydal, Morten; Sætrom, Pål; Bonnevie, Tora. NTNUs stjerneforskere. Adresseavisen 2014 NTNU Untitled

32.	Krokan, Hans Einar; Sætrom, Pål; Aas, Per Arne; Pettersen, Henrik P Sahlin; Kavli, Bodil Merete; Slupphaug, Geir. Error-free versus mutagenic processing of genomic uracil-Relevance to cancer. DNA Repair 2014 ;Volum 19. s. 38-47 NTNU STO Untitled

33.	Lange, LA; Hu, Y; Zhang, H; Xue, C; Schmidt, EM; Tang, ZZ; Bizon, C; Lange, EM; Smith, JD; Turner, EH; Jun, G; Kang, HM; Peloso, G; Auer, P; Li, KP; Flannick, J; Zhang, J; Fuchsberger, C; Gaulton, K; Lindgren, C; Locke, A; Manning, A; Sim, X; Rivas, MA; Holmen, Oddgeir; Gottesman, O; Lu, Y; Ruderfer, D; Stahl, EA; Duan, Q; Li, Y; Durda, P; Jiao, S; Isaacs, A; Hofman, A; Bis, JC; Correa, A; Griswold, ME; Jakobsdottir, J; Smith, AV; Schreiner, PJ; Feitosa, MF; Zhang, Q; Huffman, JE; Crosby, J; Wassel, CL; Do, R; Franceschini, N; Martin, LW; Robinson, JG; Assimes, TL; Crosslin, DR; Rosenthal, EA; Tsai, M; Rieder, MJ; Farlow, DN; Folsom, AR; Lumley, T; Fox, ER; Carlson, CS; Peters, U; Jackson, RD; Van Duijn, CM; Uitterlinden, AG; Levy, D; Rotter, JI; Taylor, HA; Gudnason, V; Siscovick, DS; Fornage, M; Borecki, IB; Hayward, C; Rudan, I; Chen, YE; Bottinger, EP; Loos, RJF; Sætrom, Pål; Hveem, Kristian; Boehnke, M; Groop, L; McCarthy, M; Meitinger, T; Ballantyne, CM; Gabriel, SB; O'Donnell, CJ; Post, WS; North, KE; Reiner, AP; Boerwinkle, E; Psaty, BM; Altshuler, D; Kathiresan, S; Lin, DY; Jarvik, GP; Cupples, LA; Kooperberg, C; Wilson, JG; Nickerson, DA; Abecasis, GR; Rich, SS; Tracy, RP; Willer, CJ. Whole-exome sequencing identifies rare and low-frequency coding variants associated with LDL cholesterol. American Journal of Human Genetics 2014 ;Volum 94.(2) s. 233-245 NTNU Untitled

34.	Mintz, PJ; Huang, KW; Reebye, V; Nteliopoulos, G; Lai, HS; Sætrom, Pål; Kasahara, N; Jensen, S; Pai, M; Gordon, MYA; Marley, SB; Behan, R; Spalding, DR; Haoudi, A; Emara, MM; Nicholls, J; Rossi, JJ; Habib, NA. Exploiting Human CD34(+) Stem Cell-conditioned Medium for Tissue Repair. Molecular Therapy 2014 ;Volum 22.(1) s. 149-159 NTNU Untitled

35.	Razick, Sabry; Mocnik, Rok; Thomas, Laurent; Ryeng, Einar; Drabløs, Finn; Sætrom, Pål. The eGenVar data management system--cataloguing and sharing sensitive data and metadata for the life sciences. Database: The Journal of Biological Databases and Curation 2014 NTNU Untitled

36.	Razick, Sabry; Sætrom, Pål. Data advertising and managing platform for biobanks - a use case for the eGenVar data management system. European, Middle Eastern and Afran Society for Biopreservation & Biobanking; 2014-10-21 - 2014-10-24 NTNU Untitled

37.	Razick, Sabry; Sætrom, Pål. The eGenVar Data Management System. eGenVar project,NTNU 2014 NTNU Untitled

38.	Reddy, MA; Chen, Z; Park, JT; Wang, M; Lanting, L; Zhang, Q; Bhatt, K; Leung, A; Wu, X; Putta, S; Sætrom, Pål; Devaraj, S; Natarajan, R. Regulation of inflammatory phenotype in macrophages by a diabetes-induced long noncoding RNA. Diabetes 2014 ;Volum 63.(12) s. 4249-4261 NTNU Untitled

39.	Reebye, V; Sætrom, Pål; Mintz, PJ; Huang, KW; Swiderski, P; Peng, L; Liu, C; Liu, XX; Lindkaer-Jensen, S; Zacharoulis, D; Kostomitsopoulos, N; Kasahara, N; Nicholls, JP; Jiao, LR; Pai, M; Spalding, DR; Mizandari, M; Chikovani, T; Emara, MM; Haoudi, A; Tomalia, DA; Rossi, JJ; Habib, NA. A Novel RNA Oligonucleotide Improves Liver Function and Inhibits Liver Carcinogenesis In Vivo. Hepatology 2014 ;Volum 59.(1) s. 216-227 NTNU Untitled

40.	Sætrom, Pål. Management and Analyses of Population Data on Genetic Variation. 2nd Annual Next Generation Sequencing Data Congress; 2014-05-19 - 2014-05-20 NTNU Untitled

41.	Sætrom, Pål. Når feil kopi kan gjøre deg syk. Gemini [Internett] 2014-12-15 NTNU Untitled

42.	Sætrom, Pål. The effect of the core RISC-component Ago2 on microRNA composition and regulation. Illumina Sequencing Seminar; 2014-02-13 NTNU Untitled

43.	Thomas, Laurent; Sætrom, Pål. Circular RNAs are depleted of polymorphisms at microRNA binding sites. Bioinformatics 2014 ;Volum 30.(16) s. 2243-2246 NTNU Untitled
2013
44.	Chavali, Sreenivas; Bruhn, Sören; Tiemann, Katrin; Sætrom, Pål; Barrenäs, Fredrik; Saito, Takaya; Kanduri, Kartiek; Wang, Hui; Benson, Mikael. MicroRNAs act complementarily to regulate disease-related mRNA modules in human diseases. RNA: A publication of the RNA Society 2013 ;Volum 19.(11) s. 1552-1562 NTNU Untitled

45.	Diaz, Javier Pena; Hegre, Siv Anita; Anderssen, Endre; Aas, Per Arne; Mjelle, Robin; Gilfillan, Gregor Duncan; Lyle, Robert; Drabløs, Finn; Krokan, Hans Einar; Sætrom, Pål. Transcription profiling during the cell cycle shows that a subset of Polycomb-targeted genes is upregulated during DNA replication. Nucleic Acids Research 2013 ;Volum 41.(5) s. 2846-2856 NTNU OUS STO Untitled

46.	Hegre, Siv Anita; Sætrom, Pål; Aas, Per Arne; Pettersen, Henrik P Sahlin; Otterlei, Marit; Krokan, Hans Einar. Multiple microRNAs may regulate DNA repair enzyme uracil‐DNA glycosylase. DNA Repair 2013 ;Volum 12.(1) s. 80-86 NTNU Untitled

47.	Leung, A; Trac, C; Jin, W; Lanting, L; Akbany, A; Sætrom, Pål; Schones, DE; Natarajan, R. Novel Long Noncoding RNAs Are Regulated by Angiotensin II in Vascular Smooth Muscle Cells. Circulation Research 2013 ;Volum 113.(3) s. 266-278 NTNU Untitled

48.	Lundbæk, Marie B; Sætrom, Pål. RNAi Screening and Assays. I: Encyclopedia of Molecular Cell Biology and Molecular Medicine. John Wiley & Sons 2013 ISBN 9783527600908. s. 1-26 NTNU Untitled

49.	Pena-Diaz, Javier; Hegre, Siv Anita; Anderssen, Endre; Aas, Per Arne; Mjelle, Robin; Gilfillan, Gregor Duncan; Lyle, Robert; Drabløs, Finn; Krokan, Hans Einar; Sætrom, Pål. Transcription profiling during the cell cycle shows that a subset of Polycomb-targeted genes is upregulated during DNA replication. Norwegian Biochemical Society Contact Meeting; 2013-01-31 - 2013-02-03 NTNU UiO Untitled

50.	Reebye, Vikash; Sætrom, Pål; Mintz, Paul J; Rossi, JJ; Kasahara, Noriyuki; Nteliopoulos, G; Nicholls, Joanna P; Haoudi, Abdelali; Gordon, Myrtle YA; Habib, Nagy A. A short-activating RNA oligonucleotide targeting the islet β-cell transcriptional factor MafA in CD34(+) cells. Molecular Therapy - Nucleic Acids 2013 ;Volum 2. NTNU Untitled

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