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2019
1 Baksi, Sibashish; Ball, Akash K.; Sarkar, Ujjaini; Banerjee, Debopam; Wentzel, Alexander; Preisig, Heinz A.; Kuniyal, Jagdish Chandra; Birgen, Cansu; Saha, Sudeshna; Wittgens, Bernd; Markussen, Sidsel.
Efficacy of a novel sequential enzymatic hydrolysis of lignocellulosic biomass and inhibition characteristics of monosugars. International Journal of Biological Macromolecules 2019 ;Volum 129. s. 634-644
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2 Baksi, Sibashish; Sarkar, Ujjaini; Saha, Sudeshna; Ball, Akash K.; Kuniyal, Jagdish Chandra; Wentzel, Alexander; Birgen, Cansu; Preisig, Heinz A.; Wittgens, Bernd; Markussen, Sidsel.
Studies on delignification and inhibitory enzyme kinetics of alkaline peroxide pre-treated pine and deodar saw dust. Chemical Engineering and Processing 2019
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3 Birgen, Cansu; Berglihn, Olaf Trygve; Preisig, Heinz A.; Wentzel, Alexander.
Kinetic Study of Butanol Production from Mixtures of Glucose and Xylose and Investigation of Different Pre-growth Strategies. Biochemical engineering journal 2019 ;Volum 147. s. 110-117
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4 Birgen, Cansu; Dürre, Peter; Preisig, Heinz A.; Wentzel, Alexander.
Butanol production from lignocellulosic biomass: revisiting fermentation performance indicators with exploratory data analysis. Biotechnology for Biofuels 2019 ;Volum 12.(1)
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5 Kumar, Kanhaiya; Wentzel, Alexander; Bruheim, Per.
Carbon distribution within metabolic pathways during antibiotic production by Streptomyces superhost strains. 3rd Open Conference of Functional Metagenomics International FUNCTIONAL METAGENOMICS 2019; 2019-06-16 - 2019-06-19
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6 Kumar, Kanhaiya; Wentzel, Alexander; Bruheim, Per.
Deciphering the carbon distribution in metabolic pathways during antibiotic production by Streptomyces superhost strains using 13C-isotope-labeling experiments. Minisymposia at NBS Winter meeting 2019; 2019-01-24 - 2019-01-26
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7 Kumar, Kanhaiya; Wentzel, Alexander; Bruheim, Per.
Studying the metabolism of Streptomyces coelicolor during antibiotic production in submerged batch fermentations. 8th Congress of European Microbiologists - FEMS2019; 2019-07-07 - 2019-07-11
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8 Kumar, Kanhaiya; Wentzel, Alexander; Bruheim, Per.
Studying the metabolism of Streptomyces coelicolor during antibiotic production using 13C-isotope-labeling experiments. 3rd annual Biotechnology Research and Innovation conference; 2019-09-04 - 2019-09-05
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9 Kumelj, Tjasa; Sulheim, Snorre; Wentzel, Alexander; Almaas, Eivind.
Predicting strain engineering strategies using iKS1317: a genome-scale metabolic model of Streptomyces coelicolor. Biotechnology Journal 2019 s. -
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10 Lale, Rahmi; Wentzel, Alexander.
Functional Metagenomics 2019 http://www.fmg2019.net/.
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11 Myhr, Anders; Røyne, Frida; Brandtsegg, Andreas Saur; Bjerkseter, Catho; Throne-Holst, Harald; Borch, Anita; Wentzel, Alexander; Røyne, Anja.
Towards a low CO2 emission building material employing bacterial metabolism (2/2): Prospects for global warming potential reduction in the concrete industry. PLOS ONE 2019 ;Volum 14.(4) s. -
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12 Nguyen, Giang-Son; Heggeset, Tonje Marita Bjerkan; Haugen, Tone; Lewin, Anna; Wentzel, Alexander.
Survey the diversity of CAZymes in metagenomics libraries originated from the microbial habitats in the Nordics by sequence-based data mining. FMG2019; 2019-06-16 - 2019-09-19
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13 Nguyen, Giang-Son; Lewin, Anna; Degnes, Kristin Fløgstad; Klinkenberg, Geir; Sletta, Håvard; Ellingsen, Trond Erling; Liles, Mark R.; Sandoval, Megan; Waits, Damien; Medema, Marnix H.; Navarro Munoz, Jorge; Fernandez‐Guerra, Antonio; Eijsink, Vincent; Wentzel, Alexander.
Exploring the great potential of an Actinobacteria strain collection from Trondheim fjord for the discovery of novel antibiotics and enzyme systems for biomass degradation. BIOPROSP_19; 2019-02-25 - 2019-02-27
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14 Røyne, Anja; Phua, Yi Jing; Le, Simone Balzer; Eikjeland, Ina Grosås; Josefsen, Kjell Domaas; Markussen, Sidsel; Myhr, Anders; Throne-Holst, Harald; Sikorski, Pawel; Wentzel, Alexander.
Towards a low CO2 emission building material employing bacterial metabolism (1/2): The bacterial system and prototype production. PLOS ONE 2019 ;Volum 14.(4) s. -
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15 Stankey, Robb; Johnson, Don; Wozniak, Katherine; Pereira, Alinne; Sandoval-Powers, Megan; MacDonald, Joyanne; Brumm, Phil; Sletta, Håvard; Ellingsen, Trond Erling; Wentzel, Alexander; Liles, Mark R.; Mead, David A..
New Tools For Targeted Cloning And Over Expression Of Biosynthetic Gene Clusters. SIMB Annual Meeting and Exhibition 2019; 2019-07-21 - 2019-07-24
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16 Sulheim, Snorre; Kumelj, Tjasa; Salehzadeh-Yazdi, Ali; van Dissel, Dino; Chao, Du; Nieselt, Kay; Almaas, Eivind; Wentzel, Alexander; Kerkhoven, Eduard.
An enzyme-constrained genome-scale metabolic model of Streptomyces coelicolor reveals global effects of gene cluster deletion and rpoB mutation. Digital Life Norway Conference 2019; 2019-09-05 - 2019-09-06
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17 Wentzel, Alexander; Lewin, Anna; Nordborg, Anna; Nguyen, Giang-Son; Degnes, Kristin Fløgstad; Sulheim, Snorre; Borgos, Sven Even F.; Kumelj, Tjasa; Kumar, Kanhaiya; Bruheim, Per; Almaas, Eivind; Liles, Mark R.; Sandoval, Megan; Waits, Damien S.; Mead, David A.; Medema, Marnix H.; Navarro Munoz, Jorge; Fernandez-Guerra, Antonio; van Dissel, Dino; Hulst, Mandy; Chao, Du; Van Wezel, Gilles P.; Wang, Hao; Kerkhoven, Eduard; Salehzadeh-Yazdi, Ali; Wolkenhauer, Olaf; Nieselt, Kay; Iftime, Dumitrita; Bera, Agnieszka; Hinder, Markus; Stegmann, Evi; Wohlleben, Wolfgang; Ellingsen, Trond Erling; Sletta, Håvard.
Expanding the (meta)genomics toolbox for the discovery and production of novel natural products from microbial resources. 2nd Synthetic Biology for Natural Products Conference; 2019-06-02 - 2019-06-05
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18 Wentzel, Alexander; Lewin, Anna; Nordborg, Anna; Nguyen, Giang-Son; Degnes, Kristin Fløgstad; Sulheim, Snorre; Borgos, Sven Even F.; Kumelj, Tjasa; Kumar, Kanhaiya; Bruheim, Per; Almaas, Eivind; Liles, Mark R.; Sandoval, Megan; Waits, Damien S.; Mead, David A.; Medema, Marnix H.; Navarro Munoz, Jorge; Fernandez-Guerra, Antonio; van Dissel, Dino; Hulst, Mandy; Du, Chao; Van Wezel, Gilles P.; Wang, Hao; Kerkhoven, Eduard; Salehzadeh-Yazdi, Ali; Wolkenhauer, Olaf; Nieselt, Kay; Iftime, Dumitrita; Bera, Agnieszka; Hinder, Markus; Stegmann, Evi; Wohlleben, Wolfgang; Ellingsen, Trond Erling; Sletta, Håvard.
Expanding the (meta)genomics toolbox for the discovery and production of novel natural products from microbial resources. Functional Metageomics 2019; 2019-06-16 - 2019-09-19
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19 Zehner, Jennifer Simone; Karlsen, Emil; Razbani, Mohammad Amin; Jettestuen, Espen; Malthe-Sørensen, Anders; Wentzel, Alexander; Sikorski, Pawel; Almaas, Eivind; Røyne, Anja.
The quest for bio-concrete: crossing disciplinary boundaries and wrangling bacteria to enable cleaner construction. DigitalLife 2019; 2019-09-05 - 2019-09-06
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2018
20 Baksi, Sibashish; Saha, Sudeshna; Birgen, Cansu; Sarkar, Ujjaini; Preisig, Heinz A.; Markussen, Sidsel; Wittgens, Bernd; Wentzel, Alexander.
Valorization of lignocellulosic waste (Crotalaria juncea ) using alkaline peroxide pretreatment under different process conditions: An optimization study on separation of lignin, cellulose, and hemicellulose. Journal of Natural Fibers 2018 s. -
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21 Birgen, Cansu; Markussen, Sidsel; Wentzel, Alexander; Preisig, Heinz A..
Response Surface Methodology for Understanding Glucose and Xylose Utilization by Clostridium beijerinckii NCIMB 8052. Chemical Engineering Transactions 2018 ;Volum 65. s. 61-66
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22 Birgen, Cansu; Markussen, Sidsel; Wentzel, Alexander; Preisig, Heinz A..
The Effect of Feeding Strategy on Butanol Production by Clostridium beijerinckii NCIMB 8052 Using Glucose and Xylose. Chemical Engineering Transactions 2018 ;Volum 65. s. 283-288
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23 Birgen, Cansu; Markussen, Sidsel; Wentzel, Alexander; Preisig, Heinz A.; Wittgens, Bernd.
Modeling the Growth of Clostridium beijerinckii NCIMB 8052 on Lignocellulosic Sugars. Chemical Engineering Transactions 2018 ;Volum 65. s. 289-294
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24 Hageskal, Gunhild; Haugen, Tone; Heggeset, Tonje Marita Bjerkan; Lewin, Anna; Sandbakken, Ingrid; Wentzel, Alexander.
Enzyme hunting on Svalbard: Enrichment and exploration of Artic metagenomes. ESOF 2018 EuroScience open forum; 2018-07-09 - 2018-07-14
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25 Johansen, Finn-Eirik; Brautaset, Trygve; Aune, Marie Hjelmseth; Patriksson, Alexandra; Falkenberg, Liv Eggset; Kleppe, Rune; Dick, Gunnar; Strand, Berit Løkensgard; Eijsink, Vincent; Røyne, Anja; Goksøyr, Anders; Svendsen, John Sigurd Mjøen; Fyhn, Marianne; Vik, Jon Olav; Wentzel, Alexander; Aksnes, Astrid; Bruheim, Per; Carlsen, Sven Magnus; Åm, Heidrun.
Centre for Digital Life Norway - Annual report 2017. : Senter for Digialt Liv Norge 2018 35 s.
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26 Karlsen, Emil; Zehner, Jennifer Simone; Razbani, Mohammad Amin; Jettestuen, Espen; Malthe-sørenssen, Anders; Wentzel, Alexander; Sikorski, Pawel; Almaas, Eivind; Røyne, Anja.
Metabolic modelling, reactive transport modelling, and experimental verification of microbial-induced processes in the production of bio-concrete. DigitalLife 2018; 2018-03-20 - 2018-03-21
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27 Kumar, Kanhaiya; Wentzel, Alexander; Bruheim, Per.
Intracellular metabolite profiling of Streptomyces coelicolor A3(2) during antibiotic production in nutrient stressed batch fermentation. Digital Life Workshop; 2018-03-20 - 2018-03-21
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28 Kumar, Kanhaiya; Wentzel, Alexander; Bruheim, Per.
Intracellular metabolite profiling of Streptomyces coelicolor A3(2) in nutrient stressed batch fermentation for antibiotic production. European Congress of Biotechnology 2018; 2018-07-01 - 2018-07-04
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29 Markussen, Sidsel; Haugen, Tone; Lewin, Anna; Wentzel, Alexander.
Simulated sampling from deep subsurface oil reservoirs–DNA release by rapid pressure drop and capture of disolved DNA. ESOF 2018 EuroScience open forum; 2018-07-09 - 2018-07-14
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30 Nguyen, Giang-Son; Heggeset, Tonje Marita Bjerkan; Haugen, Tone; Lewin, Anna; Sandbakken, Ingrid; Wentzel, Alexander.
Metagenomics study of microbial habitats in the Nordics. ESOF 2018 EuroScience open forum; 2018-07-09 - 2018-07-14
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31 Røyne, Anja; Phua, Yi Jing; Eikjeland, Ina Grosås; Wentzel, Alexander; Le, Simone Balzer; Josefsen, Kjell Domaas; Markussen, Sidsel; Myhr, Anders; Brandtsegg, Andreas Saur; Bjerkeseter, Cato; Throne-Holst, Harald; Borch, Anita; Sikorski, Pawel; Røyne, Frida.
BioZEment 2.0: Towards a low CO2 emission building material employing bacterial metabolism. DigitalLife 2018; 2018-03-20 - 2018-03-21
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32 Sulheim, Snorre; Degnes, Kristin Fløgstad; Nguyen, Giang-Son; Wentzel, Alexander; Almaas, Eivind.
A network approach to efficient drug discovery. International School and Conference on Network Science; 2018-06-11 - 2018-06-15
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33 Sulheim, Snorre; Kumelj, Tjasa; Sletta, Håvard; Wentzel, Alexander; Almaas, Eivind.
Predicting phenotypes using iKS1317: a genome-scale metabolic model of Streptomyces coelicolor. Digital Life Conference 2018; 2018-03-20 - 2018-03-21
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34 Sulheim, Snorre; Wentzel, Alexander; Almaas, Eivind.
Modelling the metabolic switch S. coelicolor triggered by phosphate depletion. 5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018); 2018-10-14 - 2018-10-16
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35 Wentzel, Alexander; Dürre, Peter; Jenkinson, Liz; Wolkenhauer, Olaf; Osuna, Hector; woods, jeremy.
ERA-CoBioTech: Bioprocesses for the optimized, integrated production of butyl esters from sustainable resources (BESTER). ACHEMA2018 - ERA-CoBioTech Kick-off session "Biotechnology for a sustainable bioeconomy"; 2018-06-13 - 2018-06-14
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2017
36 Birgen, Cansu; Markussen, Sidsel; Preisig, Heinz A.; Wittgens, Bernd; Wentzel, Alexander; Sarkar, Ujjaini; Saha, Sudeshna; Baksi, Sibashish.
Understanding Effect of Sugar Composition on Growth Kinetics: Fermentation of Glucose and Xylose by Clostridium Acetobutylicum ATCC 824. I: 25th European biomass conference and exhibition proceedings. : ETA Florence renewable energies 2017 ISBN 978-88-89407-17-2. s. 1042-1046
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37 Birgen, Cansu; Preisig, Heinz A.; Wentzel, Alexander; Markussen, Sidsel; Wittgens, Bernd.
Attainable Region for Biobutanol Production. Computer-aided chemical engineering 2017 ;Volum 40. s. 2893-2898
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38 Kumelj, Tjasa; Sulheim, Snorre; Wentzel, Alexander; Almaas, Eivind.
A genome-scale metabolic model for Streptomyces coelicolor. Advanced course on Metabolic engineering and Systems Biology; 2017-06-18 - 2017-06-22
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39 Kumelj, Tjasa; Sulheim, Snorre; Wentzel, Alexander; Almaas, Eivind.
Extended GEM of Streptomyces coelicolor for production of secondary metabolites. International conference on systems biology 2017 (ICSB 2017); 2017-08-06 - 2017-08-12
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40 Lewin, Anna; Zhou, Jinglie; Pham, Vu Thuy Trang; Haugen, Tone; El Zeiny, Mohamed; Aarstad, Olav Andreas; Liebl, Wolfgang; Wentzel, Alexander; Liles, Mark R..
Novel archaeal thermostable cellulases from an oil reservoir metagenome. AMB Express 2017 ;Volum 7.(183) s. -
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41 Nguyen, Giang-Son; Lewin, Anna; Heggeset, Tonje Marita Bjerkan; Degnes, Kristin Fløgstad; Klinkenberg, Geir; Sletta, Håvard; Ellingsen, Trond Erling; Liles, Mark R.; Sandoval, Megan; Waits, Damien; Medema, Marnix H.; Navarro Munoz, Jorge; Fernandez-Guerra, Antonio; Wentzel, Alexander.
Genome sequencing and taxonomic and functional evaluation of 1000 marine Actinobacteria isolates from the Trondheim fjord. Prokagenomics 2017; 2017-09-20 - 2017-09-22
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42 Røyne, Anja; Phua, Yi Jing; Borch, Anita; Throne-Holst, Harald; Josefsen, Kjell Domaas; Le, Simone Balzer; Markussen, Sidsel; Wentzel, Alexander; Myhr, Anders; Røyne, Frida; Sikorski, Pawel.
Kunsten å arbeide tverrfaglig. Forskerforum 2017 ;Volum 4.
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43 Røyne, Anja; Phua, Yi Jing; Eikjeland, Ina Grosås; Le, Simone Balzer; Markussen, Sidsel; Josefsen, Kjell Domaas; Wentzel, Alexander.
Concrete production through microbially induced dissolution and re-precipitation of limestone. Goldschmidt 2017; 2017-08-13
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44 Sandoval, Megan; Nasrin, S; Lewin, Anna; Wentzel, Alexander; Mead, David A.; Liles, Mark R..
Culture-independent and -dependent characterization and heterologous expression of biosynthetic gene clusters derived from Actinobacteria. ASM Microbe; 2017-06-01 - 2017-06-05
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45 Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander; Almaas, Eivind.
A genome-scale metabolic model for Streptomyces coelicolor. Methodologies for Digital Life - Focus on Metabolic Systems; 2017-10-06
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46 Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander; Almaas, Eivind.
A genome-scale metabolic model for Streptomyces coelicolor. Modelling living systems - From foundational problems to applications; 2017-09-07 - 2017-09-08
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47 Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander; Almaas, Eivind.
A genome-scale metabolic model for Streptomyces coelicolor. Advanced course on Metabolic engineering and Systems Biology; 2017-06-18 - 2017-06-22
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48 Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander; Almaas, Eivind.
A genome-scale metabolic model for Streptomyces coelicolor. Lunsj-seminar; 2017-09-20 - 2017-09-20
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49 Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander; Almaas, Eivind.
Extended GEM of Streptomyces coelicolor for production of secondary metabolites. International conference on systems biology 2017 (ICSB 2017); 2017-08-06 - 2017-08-12
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50 Wentzel, Alexander.
Synthetic and systems biology in discovery and production of biopharmaceuticals. Meeting with Xellia Pharmaceuticals AS; 2017-09-14 - 2017-09-14
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