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| Viser treff 1-44 av 44 |
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2023
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| 1. | Bjune, Mona Synnøve; Dyer, Laurence; Laupsa-Borge, Johnny; Sommersten, Cathrine Horn; McCann, Adrian; Glastad, Robert Clay; Johnston, Iain; Kern, Matthias; Blüher, Matthias; Mellgren, Gunnar; Dankel, Simon N. Metabolic role of the hepatic valine/3-hydroxyisobutyrate (3-HIB) pathway in fatty liver disease. EBioMedicine 2023 ;Volum 91. s. - HAUKELAND UiB |
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| 2. | Broz, Amanda K.; Sloan, Daniel B.; Johnston, Iain. Stochastic organelle genome segregation through Arabidopsis development and reproduction. New Phytologist 2023 s. - UiB |
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| 3. | Chustecki, Joanna M.; Johnston, Iain George. Collective mitochondrial dynamics resolve conflicting cellular tensions: From plants to general principles. Seminars in Cell and Developmental Biology 2023 ;Volum 156. s. 253-265 UiB |
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| 4. | Erickson, Jennifer Lee; Prautsch, Jennifer; Reynvoet, Frisine; Niemeyer, Frederik; Hause, Gerd; Johnston, Iain George; Schattat, Martin. Stromule Geometry Allows Optimal Spatial Regulation of Organelle Interactions in the Quasi-2D Cytoplasm. Plant and Cell Physiology 2023 UiB |
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| 5. | Garcia Pascual, Belen; Nordbotten, Jan Martin; Johnston, Iain. Cellular and environmental dynamics influence species-specific extents of organelle gene retention. Proceedings of the Royal Society of London. Biological Sciences 2023 ;Volum 290.(1994) s. - UiB |
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| 6. | Giannakis, Konstantinos; Broz, Amanda K.; Sloan, Daniel B.; Johnston, Iain. Avoiding misleading estimates using mtDNA heteroplasmy statistics to study bottleneck size and selection. G3: Genes, Genomes, Genetics 2023 ;Volum 13.(6) s. - UiB |
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| 7. | Glastad, Robert Clay; Johnston, Iain. Mitochondrial network structure controls cell-to-cell mtDNA variability generated by cell divisions. PLoS Computational Biology 2023 ;Volum 19.(3) s. - UiB |
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| 8. | Kumar, Rajneesh; Johnston, Iain George. Population Dynamics in Response to Environmental Stimuli. ANNUAL IBA MEETING 2023 – OSLO; 2023-10-09 - 2023-10-10 UiB |
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| 9. | Kumar, Rajneesh; Johnston, Iain George. Stochastic and Deterministic Computation in the regulation of Decision – Making Genetic circuits by Energy Availability.. Foundations of Computational Mathematics 2023; 2023-06-12 - 2023-06-17 UiB |
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| 10. | Stevens, Katie; Johnston, Iain; Luna, Estrella. Data science approaches provide a roadmap to understanding the role of abscisic acid in defence. Quantitative Plant Biology 2023 ;Volum 4. s. - UiB |
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2022
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| 11. | Broz, Amanda K.; Keene, Alexandra; Gyorfy, Matheus Fernandes; Hodous, Mychaela; Johnston, Iain; Sloan, Daniel B.. Sorting of mitochondrial and plastid heteroplasmy in Arabidopsis is extremely rapid and depends on MSH1 activity. Proceedings of the National Academy of Sciences of the United States of America 2022 ;Volum 119.(34) s. - UiB |
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| 12. | Chustecki, Joanna M.; Etherington, Ross D; Gibbs, Daniel J.; Johnston, Iain George. Altered collective mitochondrial dynamics in the Arabidopsis msh1 mutant compromising organelle DNA maintenance. Journal of Experimental Botany 2022 ;Volum 73.(16) s. 5428-5439 UiB |
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| 13. | Giannakis, Konstantinos; Arrowsmith, Samuel J.; Richards, Luke; Gasparini, Sara; Chustecki, Joanna M.; Røyrvik, Ellen Christine; Johnston, Iain. Evolutionary inference across eukaryotes identifies universal features shaping organelle gene retention. Cell Systems 2022 ;Volum 13.(11) s. 874-884.e5 UiB |
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| 14. | Johnston, Iain; Dingle, Kamaludin; Greenbury, Sam; Camargo, Chico Q.; Doye, Jonathan P K; Ahnert, Sebastian E.; Louis, Ard A.. Symmetry and simplicity spontaneously emerge from the algorithmic nature of evolution. Proceedings of the National Academy of Sciences of the United States of America 2022 ;Volum 119.(11) s. - UiB |
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| 15. | Johnston, Iain; Dingle, Kamaludin; Greenbury, Sam F.; Camargo, Chico Q.; Doye, Jonathan P.K.; Ahnert, Sebastian E.; Louis, Ard A.. Reply to Ocklenburg and Mundorf: The interplay of developmental bias and natural selection. Proceedings of the National Academy of Sciences of the United States of America 2022 ;Volum 119.(28) s. - UiB |
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| 16. | Giannakis, Konstantinos; Chustecki, Joanna M.; Johnston, Iain George. Exchange on dynamic encounter networks allows plant mitochondria to collect complete sets of mitochondrial DNA products despite their incomplete genomes. Quantitative Plant Biology 2022 ;Volum 3. UiB |
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| 17. | Johnston, Iain George. Optimal strategies in the Fighting Fantasy gaming system: influencing stochastic dynamics by gambling with limited resource. European Journal of Operational Research 2022 ;Volum 302.(3) s. 1272-1281 UiB |
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| 18. | Johnston, Iain; Slater, Mark; Cazier, Jean-Baptiste. Interdisciplinary and Transferable Concepts in Bioinformatics Education: Observations and Approaches From a UK MSc Course. Frontiers in Education 2022 ;Volum 7. s. - UiB |
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| 19. | Kerr, Ryan; Jabbari, Sara; Blair, Jessica; Johnston, Iain George. Dynamic Boolean modelling reveals the influence of energy supply on bacterial efflux pump expression. Journal of the Royal Society Interface 2022 ;Volum 19.(186) s. 1-14 UiB |
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| 20. | Moen, Marcus Theodor; Johnston, Iain George. HyperHMM: efficient inference of evolutionary and progressive dynamics on hypercubic transition graphs. Bioinformatics 2022 ;Volum 39.(1) UiB |
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| 21. | Radzvilavicius, Arunas; Johnston, Iain. Organelle bottlenecks facilitate evolvability by traversing heteroplasmic fitness valleys. Frontiers in Genetics 2022 ;Volum 13. s. - UiB |
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| 22. | Ziegler, Clare; Kulawska, Aleksandra; Kourmouli, Angeliki; Hamilton, Liz; Shi, Zongbo; MacKenzie, A. Robert; Dyson, Rosemary J.; Johnston, Iain George. Quantification and uncertainty of root growth stimulation by elevated CO<inf>2</inf> in a mature temperate deciduous forest. Science of the Total Environment 2022 ;Volum 854. UiB |
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2021
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| 23. | Autran, Daphné; Bassel, George W.; Chae, Eunyoung; Ezer, Daphne; Ferjani, Ali; Fleck, Christian; Hamant, Olivier; Hartmann, Félix P.; Jiao, Yuling; Johnston, Iain; Kwiatkowska, Dorota; Lim, Boon L.; Mahönen, Ari Pekka; Morris, Richard J.; Mulder, Bela M.; Nakayama, Naomi; Sozzani, Ross; Strader, Lucia C.; Ten Tusscher, Kirsten; Ueda, Minako; Wolf, Sebastian. What is quantitative plant biology?. Quantitative Plant Biology 2021 ;Volum 2. s. - UiB |
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| 24. | Chustecki, Joanna M.; Gibbs, Daniel J.; Bassel, George W.; Johnston, Iain George. Network analysis of Arabidopsis mitochondrial dynamics reveals a resolved tradeoff between physical distribution and social connectivity. Cell Systems 2021 ;Volum 12.(5) s. 419-431 UiB |
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| 25. | Edwards, David; Røyrvik, Ellen Christine; Chustecki, Joanne; Giannakis, Konstantinos; Glastad, Robert Clay; Radzvilavicius, Arunas; Johnston, Iain. Avoiding organelle mutational meltdown across eukaryotes with or without a germline bottleneck. PLoS Biology 2021 ;Volum 19.(4) UiB |
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| 26. | Pantic, Boris; Ives, Daniel; Mennuni, Mara; Perez-Rodriguez, Diego; Fernandez-Pelayo, Uxoa; Lopez de Arbina, Amaia; Muñoz-Oreja, Mikel; Villar-Fernandez, Marina; Dang, Thanh-mai Julie; Vergani, Lodovica; Johnston, Iain George; Pitceathly, Robert D. S.; McFarland, Robert; Hanna, Michael G.; Taylor, Robert W.; Holt, Ian J.; Spinazzola, Antonella. 2-Deoxy-D-glucose couples mitochondrial DNA replication with mitochondrial fitness and promotes the selection of wild-type over mutant mitochondrial DNA. Nature Communications 2021 ;Volum 12. UiB |
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| 27. | Peach, Robert; Greenbury, Sam; Johnston, Iain George; yaliraki, sophia; Lefèvre, David; Barahona, Mauricio. Understanding learner behaviour in online courses with Bayesian modelling and time series characterisation. Scientific Reports 2021 UiB |
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| 28. | Radzvilavicius, Arunas; Layh, Sean; Hall, Matthew D.; Dowling, Damian K.; Johnston, Iain George. Sexually antagonistic evolution of mitochondrial and nuclear linkage. Journal of Evolutionary Biology 2021 ;Volum 34.(5) s. 757-766 UiB |
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2020
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| 29. | Athanasiou, Angelos-Theodoros; Nussbaumer, T; Kummer, Stefan; Hofer, Martin; Johnston, Iain; Staltner, Moritz; Allmer, Daniela M.; Scott, Milcah C.; Vogl, Claus; Fenger, Joelle M.; Modiano, Jaime F.; Walter, Ingrid; Steinborn, Ralf. S100A4 mRNA-protein relationship uncovered by measurement noise reduction. Journal of Molecular Medicine 2020 ;Volum 98.(5) s. 735-749 UiB |
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| 30. | Duran-Nebreda, Salva; Johnston, Iain George; Bassel, George. Efficient vasculature investment in tissues can be determined without global information. Journal of the Royal Society Interface 2020 UiB |
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| 31. | Johnston, Iain George; Røyrvik, Ellen Christine. Data-Driven Inference Reveals Distinct and Conserved Dynamic Pathways of Tool Use Emergence across Animal Taxa. iScience 2020 ;Volum 23.(6) s. - UiB |
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| 32. | Lechuga-Vieco, Ana Victoria; Latorre-Pellicer, Ana; Johnston, Iain; Prota, Gennaro; Gileadi, Uzi; Justo-Méndez, Raquel; Acín-Pérez, Rebeca; Martínez-De-Mena, Raquel; Fernández-Toro, Jose María; Jimenez-Blasco, Daniel; Mora, Alfonso; Nicolás-Ávila, Jose A.; Santiago, Demetrio J.; Priori, Silvia G.; Bolaños, Juan Pedro; Sabio, Guadalupe; Criado, Luis Miguel; Ruíz-Cabello, Jesús; Cerundolo, Vincenzo; Jones, Nick S.; Enríquez, Jose Antonio. Cell identity and nucleo-mitochondrial genetic context modulate OXPHOS performance and determine somatic heteroplasmy dynamics. Science Advances 2020 ;Volum 6.(31) s. 1-13 UiB |
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| 33. | Røyrvik, Ellen Christine; Johnston, Iain. MtDNA sequence features associated with 'selfish genomes' predict tissue-specific segregation and reversion. Nucleic Acids Research (NAR) 2020 ;Volum 48.(15) s. 8290-8301 UiB |
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2019
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| 34. | Aryaman, Juvid; Bowles, Charlotte; Jones, Nick; Johnston, Iain George. Mitochondrial network state scales mtDNA genetic dynamics. Genetics 2019 ;Volum 212.(4) s. 1429-1443 UiB |
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| 35. | Greenbury, Sam; Barahona, Mauricio; Johnston, Iain. HyperTraPS: Inferring probabilistic patterns of trait acquisition in evolutionary and disease progression pathways. Cell Systems 2019 ;Volum 9. s. 1- UiB |
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| 36. | Hoitzing, Hanne; Gammage, Payam; van Haute, Lindsey; Minczuk, Michal; Johnston, Iain; Jones, Nick. Energetic costs of cellular and therapeutic control of stochastic mitochondrial DNA populations. PLoS Computational Biology 2019 ;Volum 15. s. e1007023- UiB |
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| 37. | Johnston, Iain. Tension and resolution: dynamic, evolving populations of organelle genomes within plant cells. Molecular Plant 2019 ;Volum 12. s. 764- |
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| 38. | Johnston, Iain George. Regulation of Mother-to-Offspring Transmission of mtDNA Heteroplasmy. Cell Metabolism 2019 UiB |
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| 39. | Johnston, Iain George. Varied mechanisms and models for the varying mitochondrial bottleneck. Frontiers in Cell and Developmental Biology 2019 ;Volum 7:294. s. 1-16 UiB |
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| 40. | Johnston, Iain George; Burgstaller, Joerg. Evolving mtDNA populations within cells. Biochemical Society Transactions 2019 ;Volum 47. s. 1367- UiB |
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| 41. | Johnston, Iain George; Hoffmann, Till; Greenbury, Sam; Cominetti, Ornella; Jallow, Muminatou; Kwiatkowski, Dominic; Barahona, Mauricio; Jones, Nick; Casals-Pascual, Climent. Precision identification of high-risk phenotypes and progression pathways in severe malaria without requiring longitudinal data. npj Digital Medicine 2019 ;Volum 2. s. 1- UiB |
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| 42. | Kerr, Ryan; Jabbari, Sara; Johnston, Iain. Intracellular Energy Variability Modulates Cellular Decision-Making Capacity. Scientific Reports 2019 ;Volum 9.(1) s. 1-12 UiB |
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| 43. | Ziegler, Clare; Dyson, Rosemary; Johnston, Iain George. Model selection and parameter estimation for root architecture models using likelihood-free inference. Journal of the Royal Society Interface 2019 ;Volum 16.(156) s. 1-10 UiB |
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2018
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| 44. | Johnston, Iain; Bassel, George. Identification of a bet-hedging network motif generating noise in hormone concentrations and germination propensity in Arabidopsis. Journal of the Royal Society Interface 2018 ;Volum 15. s. 20180042- UiB |
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