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2019
1 Barth, Julia Maria Isis; Villegas-Ríos, David; Freitas, Carla; Moland, Even; Star, Bastiaan; André, Carl; Knutsen, Halvor; Bradbury, Ian; Dierking, Jan; Petereit, Christoph; Righton, David; Metcalfe, Julian; Jakobsen, Kjetill Sigurd; Olsen, Esben Moland; Jentoft, Sissel.
Disentangling structural genomic and behavioral barriers in a sea of connectivity. Molecular Ecology 2019 ;Volum 28.(6) s. 1394-1411
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2 Bråte, Jon; Fuss, Janina; Jakobsen, Kjetill Sigurd; Klaveness, Dag.
Draft genome assembly and transcriptome sequencing of the golden algae Hydrurus foetidus (Chrysophyceae). F1000 Research 2019 ;Volum 8.(401)
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3 Jakobsen, Kjetill Sigurd.
The Norwegian Initiative for Biodiversity Genomics. The Earth BioGenome Project – Exploring the Dark Matter of Biology; 2019-11-05 - 2019-11-05
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4 Musilova, Zuzana; Cortesi, Fabio; Matschiner, Michael; Davies, Wayne I. L.; Patel, Jagdish Suresh; Stieb, Sara M.; De Busserolles, Fanny; Malmstrøm, Martin; Tørresen, Ole K.; Brown, Celeste J.; Mountford, Jessica K.; Hanel, Reinhold; Stenkamp, Deborah L.; Jakobsen, Kjetill Sigurd; Carleton, Karen L.; Jentoft, Sissel; Marshall, Justin; Salzburger, Walter.
Vision using multiple distinct rod opsins in deep-sea fishes. Science 2019 ;Volum 364.(6440) s. 588-592
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5 Riiser, Even Sannes; Haverkamp, Thomas Hendricus Augustus; Varadharajan, Srinidhi; Borgan, Ørnulf; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; Star, Bastiaan.
Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod. Environmental Microbiology 2019
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6 Solbakken, Monica Hongrø; Jentoft, Sissel; Reitan, Trond; Mikkelsen, Helene; Gregers, Tone Fredsvik; Bakke, Oddmund; Jakobsen, Kjetill Sigurd; Seppola, Marit.
Disentangling the immune response and host-pathogen interactions in Francisella noatunensis infected Atlantic cod. Comparative Biochemistry and Physiology - Part D:Genomics and Proteomics 2019 ;Volum 30. s. 333-346
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7 Solbakken, Monica Hongrø; Jentoft, Sissel; Reitan, Trond; Mikkelsen, Helene; Jakobsen, Kjetill Sigurd; Seppola, Marit.
Whole transcriptome analysis of the Atlantic cod vaccine response reveals subtle changes in adaptive immunity. Comparative Biochemistry and Physiology - Part D:Genomics and Proteomics 2019 ;Volum 31:100597. s. 1-12
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2018
8 Eide, Marta; Rydbeck, Halfdan; Tørresen, Ole K.; Lille-Langøy, Roger; Puntervoll, Pål; Goldstone, Jared V.; Jakobsen, Kjetill Sigurd; Stegeman, John; Goksøyr, Anders; Karlsen, Odd Andre.
Independent losses of a xenobiotic receptor across teleost evolution. Scientific Reports 2018 ;Volum 8. s. 1-13
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9 Hoff, Siv Nam Khang; Baalsrud, Helle Tessand; Tooming-Klunderud, Ave; Skage, Morten; Richmond, Todd; Obernosterer, Gregor; Shirzadi, Reza; Tørresen, Ole K.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Long‐read sequence capture of the haemoglobin gene clusters across codfish species. Molecular Ecology Resources 2018 ;Volum 19.(1) s. 245-259
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10 Jørgensen, Tor Erik; Karlsen, Bård Ove; Emblem, Åse; Breines, Ragna; Andreassen, morten; Rounge, Trine Ballestad; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Nymark, Marianne; Ursvik, anita; Coucheron, Dag H; Jakt, Lars Martin; Nordeide, Jarle Tryti; Moum, Truls Borg; Johansen, Steinar Daae.
Mitochondrial genome variation of Atlantic cod. BMC Research Notes 2018 ;Volum 11:397. s. 1-7
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11 Malmstrøm, Martin; Britz, Ralf; Matschiner, Michael; Tørresen, Ole K.; Hadiaty, Renny Kurnia; Yaakob, Norsham; Tan, Heok Hui; Jakobsen, Kjetill Sigurd; Salzburger, Walter; Rüber, Lukas.
The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes. Genome Biology and Evolution 2018 ;Volum 10.(4) s. 1088-1103
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12 Reinar, William Brynildsen; Tørresen, Ole K.; Matschiner, Michael; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The impact of repetitive DNA on speciation rates in teleost fish. SMBE 2018; 2018-07-08 - 2018-07-12
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13 Riiser, Even Sannes; Haverkamp, Thomas Hendricus Augustus; Borgan, Ørnulf; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; Star, Bastiaan.
A single vibrionales 16S rRNA oligotype dominates the intestinal microbiome in two geographically separated Atlantic cod populations. Frontiers in Microbiology 2018 ;Volum 9.
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14 Tørresen, Ole K.; Brieuc, Marine Servane; Solbakken, Monica Hongrø; Sørhus, Elin; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Meier, Sonnich; Edvardsen, Rolf; Jentoft, Sissel.
Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats. BMC Genomics 2018 ;Volum 19.(240) s. 1-17
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15 Tørresen, Ole K.; Skrede, Inger; Sandve, Simen Rød; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Borge, Ole Johan.
Gendykk i norsk natur gir ny kunnskap. Genialt 2018 (4) s. 16-18
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16 Vader, Anna; Laughinghouse IV, Haywood; Griffiths, Colin; Jakobsen, Kjetill Sigurd; Gabrielsen, Tove M..
Proton-pumping rhodopsins are abundantly expressed by microbial eukaryotes in a high-Arctic fjord. Environmental Microbiology 2018 ;Volum 20.(2) s. 890-902
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17 Varadharajan, Srinidhi; Sandve, Simen Rød; Gillard, Gareth Benjamin; Tørresen, Ole K.; Mulugeta, Teshome Dagne; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Vøllestad, Leif Asbjørn; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The grayling genome reveals selection on gene expression regulation after whole-genome duplication. Genome Biology and Evolution 2018 ;Volum 10.(10) s. 2785-2800
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2017
18 Baalsrud, Helle Tessand; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Salzburger, Walter; Hanel, Reinhold; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
De Novo Gene Evolution of Antifreeze Glycoproteins in Codfishes Revealed by Whole Genome Sequence Data. Molecular biology and evolution 2017 ;Volum 35.(3) s. 593-606
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19 Baalsrud, Helle Tessand; Voje, Kjetil L.; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Matschiner, Michael; Malmstrøm, Martin; Hanel, Reinhold; Salzburger, Walter; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth. Scientific Reports 2017 ;Volum 7. s. 1-10
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20 Barth, Julia Maria Isis; Berg, Paul Ragnar; Jonsson, Per R; Bonanomi, Sara; Corell, Hanna; Hemmer-Hansen, Jakob; Jakobsen, Kjetill Sigurd; Johannesson, Kerstin; Jorde, Per Erik; Knutsen, Halvor; Moksnes, Per-Olav; Star, Bastiaan; Stenseth, Nils Christian; Svedang, Henrik; Jentoft, Sissel; Andre, Carl.
Genome architecture enables local adaptation of Atlantic cod despite high connectivity. Molecular Ecology 2017 ;Volum 26.(17) s. 4452-4466
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21 Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; André, Carl; Knutsen, Halvor; Bradbury, Ian; Dierking, Jan; Petereit, Christoph; Righton, David; Metcalfe, Julian; Jakobsen, Kjetill Sigurd; Olsen, Esben Moland; Jentoft, Sissel.
Chromosomal rearrangements as barriers to homogenization in highly mobile fish. Integrated methods to detect polygenic adaptation from genomic data; 2017-08-31 - 2017-09-01
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22 Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; André, Carl; Knutsen, Halvor; Bradbury, Ian; Dierking, Jan; Petereit, Christoph; Righton, David; Metcalfe, Julian; Jakobsen, Kjetill Sigurd; Olsen, Esben Moland; Jentoft, Sissel.
Chromosomal rearrangements as barriers to homogenization in highly mobile fish. Congress of the European Society for Evolutionary Biology; 2017-08-20 - 2017-08-25
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23 Berg, Paul Ragnar; Star, Bastiaan; Pampoulie, Christophe; Bradbury, Ian R.; Bentzen, Paul; Hutchings, Jeffrey; Jentoft, Sissel; Jakobsen, Kjetill Sigurd.
Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions. Heredity 2017 ;Volum 119. s. 418-428
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24 Evjen, Tove Julie; Dick, Gunnar; Skogli, Erik Winther; Høiseth-Gilje, Kaja; Jakobsen, Kjetill Sigurd; Tasken, Kjetil.
Den digitale bioteknologien i Norge - Muligheter for verdiskaping, kompetansebehov og utfordringer i næringsutvikling. Universitetet i Oslo: Senter for digitalt liv, Norge 2017 (ISBN 978-82-93591-00-9) 60 s.
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25 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Whole genome sequencing data and de novo draft assemblies for 66 teleost species. Scientific Data 2017 ;Volum 4. s. 1-13
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26 Matschiner, Michael; Star, Bastiaan; Barth, Julia Maria Isis; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Genomic rearrangements a phylogenetic approach. Aqua Genome Researcher Meeting; 2017-03-02 - 2017-03-02
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27 Sandve, Simen Rød; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Rori, Rohlfs; Jakobsen, Kjetill Sigurd; Nome, Torfinn; Varadharajan, Srinidhi; Nederbragt, Alexander Johan; Vøllestad, Leif Asbjørn.
Evolution after whole genome duplication - insights from the salmonids. Evolution Conference; 2017-06-22
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28 Skage, Morten; Barth, Julia Maria Isis; Jentoft, Sissel; Øverli, Øyvind; Jakobsen, Kjetill Sigurd.
Genetisk bakgrunn hos ulv (Canis lupus) i Norge og Skandinavia. Oslo: Senter for økologisk og evolusjonær syntese, Institutt for biovitenskap, Universitetet i Oslo 2017 22 s.
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29 Solbakken, Monica Hongrø; Voje, Kjetil L.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Linking species habitat and past palaeoclimatic events to evolution of the teleost innate immune system. Proceedings of the Royal Society of London. Biological Sciences 2017 ;Volum 284.(1853) s. 1-9
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30 Star, Bastiaan; Boessenkool, Sanne; Gondek, Agata Teresa; Nikulina, Elena A.; Hufthammer, Anne Karin; Pampoulie, Christophe; Knutsen, Halvor; André, Carl; Nistelberger, Heidi Maria; Dierking, Jan; Petereit, Christoph; Heinrich, Dirk; Jakobsen, Kjetill Sigurd; Stenseth, Nils Christian; Jentoft, Sissel; Barrett, James H..
Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany. Proceedings of the National Academy of Sciences of the United States of America 2017 ;Volum 114.(34) s. 9152-9157
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31 Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Reinar, William Brynildsen; Grove, Harald; Miller, Jason R.; Walenz, Brian; Knight, James; Ekholm, Jenny M.; Peluso, Paul; Edvardsen, Rolf; Tooming-Klunderud, Ave; Skage, Morten; Lien, Sigbjørn; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod. BMC Genomics 2017 ;Volum 18. s. 1-23
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2016
32 Eide, Marta; Puntervoll, Pål; Lille-Langøy, Roger; Goldstone, Jared V.; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Rydbeck, Halfdan; Jakobsen, Kjetill Sigurd; Stegeman, John; Goksøyr, Anders; Karlsen, Odd Andre.
Chemical warfare in the marine environment: genomic survey of the Atlantic cod (Gadus morhua) defensome reveals the absence of an important xenosensor. 30th ESCBP Congress: Unraveling complexity: from molecules to ecosystems; 2016-09-04 - 2016-09-07
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33 Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; Berg, Paul Ragnar; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Ancient genomic variation separates Atlantic cod ecotypes; implications for management. 7th World Fisheries Congress; 2016-05-23 - 2016-05-27
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34 Berg, Paul Ragnar; Star, Bastiaan; Pampoulie, Christophe; Sodeland, Marte; Barth, Julia Maria Isis; Knutsen, Halvor; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod. Scientific Reports 2016 ;Volum 6. s. 1-12
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35 Gante, Hugo F; Matschiner, Michael; Malmstrøm, Martin; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; Salzburger, Walter.
Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika. Molecular Ecology 2016 ;Volum 25.(24) s. 6143-6161
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36 Hicks, Natalie; Vik, Unni; Taylor, Peter; Ladoukakis, Efthymios; Park, Joonsang; Kolisis, Frangiskos; Jakobsen, Kjetill Sigurd.
Using Prokaryotes for Carbon Capture Storage. Trends in Biotechnology 2016 ;Volum 35.(1) s. 22-32
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37 Knudsen, Jonfinn B.; Reinar, William B.; Jakobsen, Kjetill Sigurd.
Evolutionary and functional importance of simple repeats in eukaryotic genomes. CEES Annual Student Conference; 2016-11-22 - 2016-11-23
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38 Lien, Sigbjørn; Koop, Ben F; Sandve, Simen Rød; Miller, Jason R.; Kent, Matthew Peter; Nome, Torfinn; Hvidsten, Torgeir Rhoden; Leong, Jong; Minkley, David R.; Zimin, Aleksey; Grammes, Fabian; Grove, Harald; Gjuvsland, Arne Bjørke; Walenz, Brian; Hermansen, Russell A.; von Schalburg, Kristian R.; Rondeau, Eric; Genova, Alex Di; Antony Samy, Jeevan Karloss; Vik, Jon Olav; Vigeland, Magnus Dehli; Caler, Lis; Grimholt, Unni; Jentoft, Sissel; Våge, Dag Inge; de Jong, Pieter J.; Moen, Thomas; Baranski, Matthew; Palti, Yniv; Smith, Douglas W.; Yorke, James A.; Nederbragt, Alexander J.; Tooming-Klunderud, Ave; Jakobsen, Kjetill Sigurd; Jiang, Xuanting; Fan, Dingding; Hu, Yan; Liberles, David A.; Vidal, Rodrigo; Iturra, Patricia; Jones, Steven J.M.; Jonassen, Inge; Maass, Alejandro; Omholt, Stig William; Davidson, William S.
The Atlantic salmon genome provides insights into rediploidization. Nature 2016 ;Volum 533.(7602) s. 200-205
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39 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav; Hansen, Thomas F; Baalsrud, Helle Tessand; Nederbragt, Alexander Johan; Hanel, Reinhold; Salzburger, Walter; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics 2016 ;Volum 48.(10) s. 1204-1210
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40 Rose, Carina; Torgersen, Eivind; Ørmen, Torfinn; Høiland, Klaus; Jakobsen, Kjetill Sigurd.
Hva er egentlig en art?. http://forskning.no/2016/11/-biologi-hva-er-egentlig-en-art [Internett] 2016-11-28
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41 Solbakken, Monica Hongrø; Rise, Matthew L.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Successive losses of central immune genes characterize the Gadiformes’ alternate immunity. Genome Biology and Evolution 2016 ;Volum 8.(11) s. 3508-3515
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42 Solbakken, Monica Hongrø; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Seppola, Marit; Gregers, Tone Fredsvik; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-like receptor repertoire by gene losses and expansions. Scientific Reports 2016 ;Volum 6.
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43 Star, Bastiaan; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Pampoulie, Christophe; Jentoft, Sissel.
Genomic characterization of the Atlantic cod sex-locus. Scientific Reports 2016 ;Volum 6. s. 1-9
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44 Tørresen, Ole Kristian; Rise, Matthew L.; Jin, Xingkun; Star, Bastiaan; MacKenzie, Simon; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan; Jentoft, Sissel.
An improved version of the Atlantic cod genome and advancements in functional genomics: implications for the future of cod farming. I: Genomics in Aquaculture. Elsevier 2016 ISBN 9780128014189. s. 45-72
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45 Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
The new era of genome sequencing using high-throughput sequencing technology: Generation of the first version of the Atlantic cod genome. I: Genomics in Aquaculture. Elsevier 2016 ISBN 9780128014189. s. 1-20
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2015
46 Baalsrud, Helle Tessand; Tørresen, Ole Kristian; Malmstrøm, Martin; Salzburger, Walter; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
The hemoglobin repertoire in the order of Gadiformes linked to depth adaptation. European Society for Evolutionary Biology (ESEB) 2015; 2015-08-10 - 2015-08-14
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47 Berg, Paul Ragnar; Jentoft, Sissel; Star, Bastiaan; Ring, Kristoffer Hofaker; Knutsen, Halvor; Lien, Sigbjørn; Jakobsen, Kjetill Sigurd; Andre, Carl.
Adaptation to low salinity promotes genomic divergence in Atlantic Cod (Gadus morhua L.). Genome Biology and Evolution 2015 ;Volum 7.(6) s. 1644-1663
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48 Jakobsen, Kjetill Sigurd.
Scientists study teeth and gerbils to further understand plague. [Internett] 2015-02-10
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49 Jakobsen, Kjetill Sigurd.
Store datamengder. Apollon-lansering; 2015-10-14 - 2015-10-15
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50 Jakobsen, Kjetill Sigurd.
The Codfather - Toppforsker på fisketur. Forskningsdagene; 2015-09-21
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