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2021
1 Kidd, Susanne Gundersen; Carm, Kristina Totland; Bogaard, Mari; Olsen, Linn Guro; Bakken, Anne Cathrine; Løvf, Marthe; Lothe, Ragnhild A; Axcrona, Karol; Axcrona, Ulrika; Skotheim, Rolf I..
High expression of SCHLAP1 in primary prostate cancer is an independent predictor of biochemical recurrence, despite substantial heterogeneity. Neoplasia 2021 ;Volum 23.(6) s. 634-641
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2020
2 Hoff, Andreas Midbøe; Kraggerud, Sigrid M.; Alagaratnam, Sharmini; Berg, Kaja Christine Graue; Johannessen, Bjarne; Høland, Maren; Nilsen, Gro; Lingjærde, Ole Christian; Andrews, Peter W.; Lothe, Ragnhild A; Skotheim, Rolf I..
Frequent copy number gains of SLC2A3 and ETV1 in testicular embryonal carcinomas. Endocrine-Related Cancer 2020 ;Volum 27.(9) s. 457-468
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3 Zhao, Sen; Hoff, Andreas Midbøe; Skotheim, Rolf I..
ScaR - A tool for sensitive detection of known fusion transcripts: Establishing prevalence of fusions in testicular germ cell tumours. NAR Genomics and Bioinformatics 2020 ;Volum 2.(1) s. -
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2019
4 Carm, Kristina Totland; Hoff, Andreas Midbøe; Bakken, Anne Cathrine; Axcrona, Ulrika; Axcrona, Karol; Lothe, Ragnhild A; Skotheim, Rolf I.; Løvf, Marthe.
Interfocal heterogeneity challenges the clinical usefulness of molecular classification of primary prostate cancer. Scientific Reports 2019 ;Volum 9.(1) s. -
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5 Neckmann, Ulrike; Wolowczyk, Camilla; Hall, Martina; Almaas, Eivind; Ren, Jiang; Zhao, Sen; Johannessen, Bjarne; Skotheim, Rolf I.; Bjørkøy, Geir; Dijke, Peter Ten; Holien, Toril.
GREM1 is associated with metastasis and predicts poor prognosis in ER-negative breast cancer patients. Cell Communication and Signaling 2019 ;Volum 17.
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6 Smeby, Jørgen; Sveen, Anita; Eilertsen, Ina Andrassy; Danielsen, Stine Aske; Hoff, Andreas Midbøe; Eide, Peter Andreas Wold; Johannessen, Bjarne; Hektoen, Merete; Skotheim, Rolf I.; Guren, Marianne; Nesbakken, Arild; Lothe, Ragnhild A.
Transcriptional and functional consequences of TP53 splice mutations in colorectal cancer. Oncogenesis 2019 ;Volum 8:35.(6) s. 1-8
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2018
7 Celestino, Ricardo; Nome, Torfinn; Pestana, Ana; Hoff, Andreas Midbøe; Gonçalves, A. Pedro; Pereira, Luísa; Cavadas, Bruno; Eloy, Catarina; Bjøro, Trine; Sobrinho-Simões, Manuel; Skotheim, Rolf I.; Soares, Paula.
CRABP1, C1QL1 and LCN2 are biomarkers of differentiated thyroid carcinoma, and predict extrathyroidal extension. BMC Cancer 2018 ;Volum 18:68. s. 1-16
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8 Eilertsen, Ina Andrassy; Sveen, Anita; Strømme, Jonas Meier; Skotheim, Rolf I.; Nesbakken, Arild; Lothe, Ragnhild A.
Alternative splicing expands the prognostic impact of KRAS in microsatellite stable primary colorectal cancer. International Journal of Cancer 2018 ;Volum 144.(4) s. 841-847
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9 Løvf, Marthe; Zhao, Sen; Axcrona, Ulrika; Johannessen, Bjarne; Bakken, Anne Cathrine; Carm, Kristina Totland; Hoff, Andreas Midbøe; Myklebost, Ola; Meza, Leonardo Zepeda; Lie, Kathrine; Axcrona, Karol; Lothe, Ragnhild A; Skotheim, Rolf I..
Multifocal primary prostate cancer exhibits high degree of genomic heterogeneity. European Urology 2018 s. 1-8
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10 Rajpert-De Meyts, Ewa; Skotheim, Rolf I..
Complex Polygenic Nature of Testicular Germ Cell Cancer Suggests Multifactorial Aetiology. European Urology 2018 ;Volum 73.(6) s. 832-833
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2017
11 Berg, Kaja Christine Graue; Eide, Peter Andreas Wold; Eilertsen, Ina Andrassy; Johannessen, Bjarne; Bruun, Jarle; Danielsen, Stine Aske; Bjørnslett, Merete Pauline; Meza, Leonardo Zepeda; Eknæs, Mette; Lind, Guro Elisabeth; Myklebost, Ola; Skotheim, Rolf I.; Sveen, Anita; Lothe, Ragnhild A.
Multi-omics of 34 colorectal cancer cell lines - a resource for biomedical studies. Molecular Cancer 2017 ;Volum 16:116. s. 1-16
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12 Lågstad, Stian; Zhao, Sen; Hoff, Andreas Midbøe; Johannessen, Bjarne; Lingjærde, Ole Christian; Skotheim, Rolf I..
Chimeraviz: A tool for visualizing chimeric RNA. Bioinformatics 2017 ;Volum 33.(18) s. 2954-2956
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13 Moen, Line Victoria; Ramberg, Håkon Andre; Zhao, Sen; Grytli, Helene Hartvedt; Sveen, Anita; Berge, Viktor; Skotheim, Rolf I.; Tasken, Kristin Austlid; Skålhegg, Bjørn Steen.
Observed correlation between the expression levels of catalytic subunit, C?2, of cyclic adenosine monophosphate-dependent protein kinase and prostate cancer aggressiveness. Urologic Oncology 2017 ;Volum 35.(3) s. 111.e1-111.e8
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14 Smebye, Marianne Lislerud; Agostini, Antonio; Johannessen, Bjarne; Thorsen, Jim; Davidson, Ben; Tropé, Claes Gøran; Heim, Sverre; Skotheim, Rolf I.; Micci, Francesca.
Involvement of DPP9 in gene fusions in serous ovarian carcinoma. BMC Cancer 2017 ;Volum 17.(1)
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15 Smebye, Marianne Lislerud; Haugom, Lisbeth; Davidson, Ben; Tropé, Claes Gøran; Heim, Sverre; Skotheim, Rolf I.; Micci, Francesca.
Bilateral ovarian carcinomas differ in the expression of metastasis-related genes. Oncology Letters 2017 ;Volum 13.(1) s. 184-190
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16 Sveen, Anita; Johannessen, Bjarne; Tengs, Torstein; Danielsen, Stine Aske; Eilertsen, Ina Andrassy; Lind, Guro Elisabeth; Berg, Kaja Christine Graue; Leithe, Edward; Meza, Leonardo Zepeda; Domingo, Enric; Myklebost, Ola; Kerr, David; Tomlinson, Ian; Nesbakken, Arild; Skotheim, Rolf I.; Lothe, Ragnhild A.
Multilevel genomics of colorectal cancers with microsatellite instability – clinical impact of JAK1 mutations and consensus molecular subtype 1. Genome Medicine 2017 ;Volum 9.(1)
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17 Zhao, Sen; Løvf, Marthe; Carm, Kristina Totland; Bakken, Anne Cathrine; Hoff, Andreas Midbøe; Skotheim, Rolf I..
Novel transcription-induced fusion RNAs in prostate cancer. OncoTarget 2017 ;Volum 8.(30) s. 49133-49143
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2016
18 Hoff, Andreas Midbøe; Alagaratnam, Sharmini; Zhao, Sen; Bruun, Jarle; Andrews, PW; Lothe, Ragnhild A; Skotheim, Rolf Inge.
Identification of novel fusion genes in testicular germ cell tumors. Cancer Research 2016 ;Volum 76.(1) s. 108-116
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19 Lorenz, Susanne; Barøy, Tale; Sun, Jinchang; Nome, Torfinn; Vodak, Daniel; Bryne, Jan Christian; Håkelien, Anne-Mari; Fernandez-Cuesta, Lynnette; Möhlendick, B; Rieder, H; Szuhai, K; Zaikova, Olga; Ahlquist, Terje Cruickshank; Thomassen, Gard O Sundby; Skotheim, Rolf Inge; Lothe, Ragnhild A; Tarpey, P; Campbell, P.; Flanagan, A; Myklebost, Ola; Meza, Leonardo Zepeda.
Unscrambling the genomic chaos of osteosarcoma reveals extensive transcript fusion, recurrent rearrangements and frequent novel TP53 aberrations. OncoTarget 2016 ;Volum 7.(5) s. 5273-5288
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20 Ramberg, Håkon Andre; Grytli, Helene Hartvedt; Nygård, Ståle; Wang, Wanzhong; Øgren, Hans Olav; Zhao, Sen; Løvf, Marthe; Katz, Betina; Skotheim, Rolf I.; Bjartell, Anders; Eri, Lars Magne; Berge, Viktor; Svindland, Aud; Tasken, Kristin Austlid.
PBX3 is a putative biomarker of aggressive prostate cancer. International Journal of Cancer 2016 ;Volum 139.(8) s. 1810-1820
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21 Sveen, Anita; Kilpinen, Sami; Ruusulehto, Anja; Lothe, Ragnhild A; Skotheim, Rolf Inge.
Aberrant RNA splicing in cancer; Expression changes and driver mutations of splicing factor genes. Oncogene 2016 ;Volum 35.(19) s. 2413-2427
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2015
22 Brabrand, Sigmund; Johannessen, Bjarne; Axcrona, Ulrika; Kraggerud, Sigrid M.; Berg, Kaja Christine Graue; Bakken, Anne Cathrine; Bruun, Jarle; Fosså, Sophie Dorothea; Lothe, Ragnhild A; Lehne, Gustav; Skotheim, Rolf Inge.
Exome sequencing of bilateral testicular germ cell tumors suggests independent development lineages. Neoplasia 2015 ;Volum 17.(2) s. 167-174
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23 Bruun, Jarle; Kolberg, Matthias; Ahlquist, Terje Cruickshank; Røyrvik, Ellen Christine; Nome, Torfinn; Leithe, Edward; Lind, Guro Elisabeth; Merok, Marianne Aarstad; Rognum, Torleiv Ole; Bjørkøy, Geir; Johansen, Terje; Lindblom, Annika; Sun, X-F.; Svindland, Aud; Liestøl, Knut; Nesbakken, Arild; Skotheim, Rolf Inge; Lothe, Ragnhild A.
Regulator of chromosome condensation 2 identifies high-risk patients within both major phenotypes of colorectal cancer. Clinical Cancer Research 2015 ;Volum 21.(16) s. 3759-3770
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24 Cekaite, Lina; Eide, Peter Andreas Wold; Lind, Guro Elisabeth; Skotheim, Rolf I.; Lothe, Ragnhild A.
MicroRNAs as growth regulators, their function and biomarker status in colorectal cancer. OncoTarget 2015 ;Volum 7.(6) s. 6476-6505
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25 Hoff, Andreas Midbøe; Johannessen, Bjarne; Alagaratnam, Sharmini; Zhao, Sen; Nome, Torfinn; Løvf, Marthe; Bakken, Anne Cathrine; Hektoen, Merete; Sveen, Anita; Lothe, Ragnhild A; Skotheim, Rolf Inge.
Novel RNA variants in colorectal cancers. OncoTarget 2015 ;Volum 6.(34) s. 36587-36602
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26 Johannessen, Bjarne; Sveen, Anita; Skotheim, Rolf Inge.
Tin: An R package for transcriptome instability analysis. Cancer Informatics 2015 ;Volum 14. s. 109-112
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27 Kolberg, Matthias; Høland, Maren; Lind, Guro Elisabeth; Ågesen, Trude Holmeide; Skotheim, Rolf Inge; Hall, Kirsten Sundby; Mandahl, Nils; Smeland, Sigbjørn; Mertens, Fredrik; Davidson, Ben; Lothe, Ragnhild A.
Protein expression of BIRC5, TK1, and TOP2A in malignant peripheral nerve sheath tumours - A prognostic test after surgical resection. Molecular Oncology 2015 ;Volum 9.(6) s. 1129-1139
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28 Mesquita, Diana; Barros-Silva, João D.; Santos, Joana; Skotheim, Rolf Inge; Lothe, Ragnhild A; Paulo, Paula; Teixeira, Manuel.
Specific and redundant activities of ETV1 and ETV4 in prostate cancer aggressiveness revealed by co-overexpression cellular contexts. OncoTarget 2015 ;Volum 6.(7) s. 5217-5236
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29 Munkley, Jennifer; Oltean, Sebastian; Vodak, Daniel; Wilson, Brian T.; Livermore, Karen E.; Zhou, Yan; Star, Eleanor; Floros, Vasileios I.; Johannessen, Bjarne; Knight, Bridget; McCullagh, Paul; McGrath, John; Crundwell, Malcolm; Skotheim, Rolf Inge; Robson, Craig N.; Leung, Hing Y.; Harries, Lorna W.; Rajan, Prabhakar; Mills, Ian Geoffrey; Elliott, David J..
The androgen receptor controls expression of the cancerassociated sTn antigen and cell adhesion through induction of ST6GalNAc1 in prostate cancer. OncoTarget 2015 ;Volum 6.(33) s. 34358-34374
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30 Rounge, Trine Ballestad; Furu, Kari; Skotheim, Rolf Inge; Haugen, Trine B.; Enerly, Espen; Grotmol, Tom.
Small RNA profiling of human testicular cancer tissue samples shows abundant tRNA fragments and global loss of piRNA. American Association for Cancer Research Annual Meeting 2015; 2015-04-18 - 2015-04-22
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31 Rounge, Trine Ballestad; Furu, Kari; Skotheim, Rolf Inge; Haugen, Trine B.; Grotmol, Tom; Enerly, Espen.
Profiling of the small RNA populations in human testicular germ cell tumors shows global loss of piRNAs. Molecular Cancer 2015 ;Volum 14.(153) s. -
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2014
32 Løvf, Marthe; Nome, Torfinn; Bruun, Jarle; Eknæs, Mette; Bakken, Anne Cathrine; Mpindi, John-Patrick; Kilpinen, Sami; Rognum, Torleiv Ole; Nesbakken, Arild; Kallioniemi, Olli; Lothe, Ragnhild A; Skotheim, Rolf Inge.
A novel transcript, VNN1-AB, as a biomarker for colorectal cancer. International Journal of Cancer 2014 ;Volum 135.(9) s. 2077-2084
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33 Nome, Torfinn; Hoff, Andreas Midbøe; Bakken, Anne Cathrine; Rognum, Torleiv Ole; Nesbakken, Arild; Skotheim, Rolf Inge.
High frequency of fusion transcripts involving TCF7L2 in colorectal cancer: Novel fusion partner and splice variants. PLOS ONE 2014 ;Volum 9.(3)
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34 Oppelt, Angela; Haugsten, Ellen Margrethe; Zech, Tobias; Danielsen, Håvard Emil; Sveen, Anita; Lobert, Viola Helene; Skotheim, Rolf Inge; Wesche, Jørgen.
PIKfyve, MTMR3 and their product PtdIns5P regulate cancer cell migration and invasion through activation of Rac1. Biochemical Journal 2014 ;Volum 461.(3) s. 383-390
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35 Smebye, Marianne Lislerud; Sveen, Anita; Haugom, Lisbeth; Davidson, Ben; Tropé, Claes Gøran; Lothe, Ragnhild A; Heim, Sverre; Skotheim, Rolf Inge; Micci, Francesca.
Chromosome 19 rearrangements in ovarian carcinomas: Zinc finger genes are particularly targeted. Genes, Chromosomes and Cancer 2014 ;Volum 53.(7) s. 558-567
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36 Sveen, Anita; Johannessen, Bjarne; Teixeira, Manuel; Lothe, Ragnhild A; Skotheim, Rolf Inge.
Transcriptome instability as a molecular pan-cancer characteristic of carcinomas. BMC Genomics 2014 ;Volum 15.(1)
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37 Vedeld, Hege Marie; Skotheim, Rolf Inge; Lothe, Ragnhild A; Lind, Guro Elisabeth.
The recently suggested intestinal cancer stem cell marker DCLK1 is an epigenetic biomarker for colorectal cancer. Epigenetics 2014 ;Volum 9.(3) s. 346-350
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2013
38 Paulo, Paula; Bakken, Anne Cathrine; Cerveira, Nuno; Løvf, Marthe; Henrique, Rui; Jerónimo, Carmen; Lothe, Ragnhild A; Skotheim, Rolf Inge; Teixeira, Manuel; Barros-Silva, João D..
Novel 5 ' Fusion Partners of ETV1 and ETV4 in Prostate Cancer. Neoplasia 2013 ;Volum 15.(7) s. 720-726
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39 Alagaratnam, Sharmini; Harrison, Neil; Bakken, Anne Cathrine; Hoff, Andreas Midbøe; Jones, Mark; Sveen, Anita; Moore, Harry D.; Andrews, Peter W.; Lothe, Ragnhild A; Skotheim, Rolf Inge.
Transforming Pluripotency: An Exon-Level Study of Malignancy-Specific Transcripts in Human Embryonal Carcinoma and Embryonic Stem Cells. Stem Cells and Development 2013 ;Volum 22.(7) s. 1136-1146
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40 Chung, Charles C.; Kanetsky, Peter A.; Wang, Zhaoming; Hildebrandt, Michelle A.T.; Koster, Roelof; Skotheim, Rolf Inge; Kratz, Christian P.; Turnbull, Clare; Cortessis, Victoria K.; Bakken, Anne Cathrine; Bishop, D. Timothy; Cook, Michael B.; Erickson, R. Loren; Fosså, Sophie Dorothea; Jacobs, Kevin B.; Korde, Larissa A.; Kraggerud, Sigrid M.; Lothe, Ragnhild A; Loud, Jennifer T.; Rahman, Nazneen; Skinner, Eila C.; Thomas, Duncan C.; Wu, Xifeng; Yeager, Meredith; Schumacher, Frecrick R.; Greene, Mark H.; Schwartz, Stephen M.; McGlynn, Katherine A.; Chanock, Stephen J.; Nathanson, Katherine L..
Meta-analysis identifies four new loci associated with testicular germ cell tumor. Nature Genetics 2013 ;Volum 45.(6) s. 680-685
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41 Kraggerud, Sigrid M.; Høi-Hansen, Christina E.; Alagaratnam, Sharmini; Skotheim, Rolf Inge; Abeler, Vera Maria; Rajpert-De Meyts, Ewa; Lothe, Ragnhild A.
Molecular characteristics of malignant ovarian germ cell tumors and comparison with testicular counterparts : implications for pathogenesis. Endocrine reviews 2013 ;Volum 34.(3) s. 339-376
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42 Løvf, Marthe; Thomassen, Gard O Sundby; Mertens, Fredrik; Cerveira, Nuno; Teixeira, Manuel; Lothe, Ragnhild A; Skotheim, Rolf Inge.
Assessment of Fusion Gene Status in Sarcomas Using a Custom Made Fusion Gene Microarray. PLOS ONE 2013 ;Volum 8.(8) s. -
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43 Nome, Torfinn; Thomassen, Gard O Sundby; Bruun, Jarle; Ahlquist, Terje Cruickshank; Bakken, Anne Cathrine; Hoff, Andreas Midbøe; Rognum, Torleiv Ole; Nesbakken, Arild; Lorenz, Susanne; Sun, Jinchang; Barros-Silva, João D.; Lind, Guro Elisabeth; Myklebost, Ola; Teixeira, Manuel; Meza-Zepeda, Leonardo Andrés; Lothe, Ragnhild A; Skotheim, Rolf Inge.
Common fusion transcripts identified in colorectal cancer cell lines by high throughput RNA sequencing. Translational Oncology 2013 ;Volum 6.(5) s. 546-553
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44 Schumacher, Frecrick R.; Wang, Zhaoming; Skotheim, Rolf Inge; Koster, Roelof; Chung, Charles C.; Hildebrandt, Michelle A.T.; Kratz, Christian P.; Bakken, Anne Cathrine; Bishop, D. Timothy; Cook, Michael B.; Erickson, R. Loren; Fosså, Sophie Dorothea; Greene, Mark H.; Jacobs, Kevin B.; Kanetsky, Peter A.; Kolonel, Laurence N.; Loud, Jennifer T.; Korde, Larissa A.; Le Marchand, Loïc; Lewinger, Juan Pablo; Lothe, Ragnhild A; Pike, Malcolm C.; Rahman, Nazneen; Rubertone, Mark V.; Schwartz, Stephen M.; Siegmund, Kimberly D.; Skinner, Eila C.; Turnbull, Clare; Van den Berg, David J.; Wu, Xifeng; Yeager, Meredith; Nathanson, Katherine L.; Chanock, Stephen J.; Cortessis, Victoria K.; McGlynn, Katherine A..
Testicular germ cell tumor susceptibility associated with the UCK2 locus on chromosome 1q23. Human Molecular Genetics 2013 ;Volum 22.(13) s. 2748-2753
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45 Sveen, Anita; Nesbakken, Arild; Ågesen, Trude Holmeide; Guren, Marianne; Tveit, Magne Kjell; Skotheim, Rolf Inge; Lothe, Ragnhild A.
Anticipating the Clinical Use of Prognostic Gene Expression-Based Tests for Colon Cancer Stage II and III: Is Godot Finally Arriving?. Clinical Cancer Research 2013 ;Volum 19.(24) s. 6669-6677
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2012
46 Camões, Maria J; Paulo, Paula; Ribeiro, Franclim R; Barros-Silva, Joao D.; Almeida, Mafalda; Costa, Vera L; Cerveira, Nuno; Skotheim, Rolf Inge; Lothe, Ragnhild A; Henrique, Rui; Jeronimo, Carmen; Teixeira, Manuel.
Potential Downstream Target Genes of Aberrant ETS Transcription Factors Are Differentially Affected in Ewing's Sarcoma and Prostate Carcinoma. PLOS ONE 2012 ;Volum 7.(11) s. -
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47 Cekaite, Lina; Rantala, Juha K.; Bruun, Jarle; Guriby, Marianne; Ågesen, Trude Holmeide; Danielsen, Stine Aske; Lind, Guro Elisabeth; Nesbakken, Arild; Kallioniemi, Olli; Lothe, Ragnhild A; Skotheim, Rolf Inge.
MiR-9,-31, and-182 Deregulation Promote Proliferation and Tumor Cell Survival in Colon Cancer. Neoplasia 2012 ;Volum 14.(9) s. 868-U126
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48 Celestino, Ricardo; Sigstad, Eva; Løvf, Marthe; Thomassen, Gard O Sundby; Kotanska-Grøholt, Krystyna; Jørgensen, Lars Hilmar; Berner, Aasmund; Castro, Patrícia; Lothe, Ragnhild A; Bjøro, Trine; Sobrinho-Simões, Manuel; Soares, Paula; Skotheim, Rolf Inge.
Survey of 548 oncogenic fusion transcripts in thyroid tumors supports the importance of the already established thyroid fusions genes. Genes, Chromosomes and Cancer 2012 ;Volum 51.(12) s. 1154-1164
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49 Matheu, Ander; Collado, Manuel; Wise, Clare; Manterola, Lorea; Cekaite, Lina; Tye, Angela J.; Canamero, Marta; Bujanda, Luis; Schedl, Andreas; Cheah, Kathryn S.E.; Skotheim, Rolf Inge; Lothe, Ragnhild A; de Munain, Adolfo López; Briscoe, James; Serrano, Manuel; Lovell-Badge, Robin.
Oncogenicity of the Developmental Transcription Factor Sox9. Cancer Research 2012 ;Volum 72.(5) s. 1301-1315
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50 Nyquist, Kaja Beate; Panagopoulos, Ioannis; Thorsen, Jim; Haugom, Lisbeth; Gorunova, Ludmila; Bjerkehagen, Bodil; Fosså, Alexander; Guriby, Marianne; Nome, Torfinn; Lothe, Ragnhild A; Skotheim, Rolf Inge; Heim, Sverre; Micci, Francesca.
Whole-Transcriptome Sequencing Identifies Novel IRF2BP2-CDX1 Fusion Gene Brought about by Translocation t(1;5)(q42;q32) in Mesenchymal Chondrosarcoma. PLOS ONE 2012 ;Volum 7.(11) s. -
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