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2024
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Istvan, Paula; Birkeland, Einar Elvbakken; Avershina, Ekaterina; Kværner, Ane Sørlie; Bemanian, Vahid; Pardini, Barbara; Tarallo, Sonia; de Vos, Willem M.; Rognes, Torbjørn; Berstad, Paula Marianna; Rounge, Trine Ballestad. Exploring the gut DNA virome in fecal immunochemical test stool samples reveals associations with lifestyle in a large population-based study. Nature Communications 2024 ;Volum 15. s. 1-12 OUS UiO FHI AHUS
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2023
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2. |
Abu-Halima, Masood; Keller, Andreas; Becker, Lea Simone; Fischer, Ulrike; Engel, Annika; Ludwig, Nicole; Kern, Fabian; Rounge, Trine Ballestad; Langseth, Hilde; Meese, Eckart; Keller, Verena. Dynamic and static circulating cancer microRNA biomarkers – a validation study. RNA Biology 2023 ;Volum 20.(1) s. 1-9 UiO KREFTREG
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Birkeland, Einar Elvbakken; Ferrero, Giulio; Pardini, Barbara; Umu, Sinan Ugur; Tarallo, Sonia; Bulfamante, Sara; Hoff, Geir Svein; Senore, Carlo; Rounge, Trine Ballestad; Naccarati, Alessio. Profiling small RNAs in fecal immunochemical tests: is it possible?. Molecular Cancer 2023 ;Volum 22:161.(1) s. 1-7 UiO STHF KREFTREG
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Bucher-Johannessen, Cecilie; Birkeland, Einar Elvbakken; Vinberg, Elina; Bemanian, Vahid; Hoff, Geir Svein; Berstad, Paula; Rounge, Trine Ballestad. Long-term follow-up of colorectal cancer screening attendees identifies differences in Phascolarctobacterium spp. using 16S rRNA and metagenome sequencing. Frontiers in Oncology 2023 ;Volum 13. s. - UiO KREFTREG AHUS OUS STHF
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Kværner, Ane Sørlie; Andersen, Astrid Riseth; Henriksen, Hege Berg; Knudsen, Markus Dines; Johansen, Anne Marte Wetting; Hjartåker, Anette; Bøhn, Siv Kjølsrud; Paur, Ingvild; Wiedswang, Gro; Smeland, Sigbjørn; Rounge, Trine Ballestad; Blomhoff, Rune; Berstad, Paula. Associations of the 2018 World Cancer Research Fund/American Institute of Cancer Research (WCRF/AICR) cancer prevention recommendations with stages of colorectal carcinogenesis. Cancer Medicine 2023 ;Volum 12.(13) s. 14806-14819 KREFTREG OUS UiO NMBU
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Løvestad, Alexander; Stosic, Milan; Costanzi, Jean-Marc; Christiansen, Irene Kraus; Aamot, Hege Vangstein; Ambur, Ole Herman; Rounge, Trine Ballestad. TaME-seq2: tagmentation-assisted multiplex PCR enrichment sequencing for viral genomic profiling. Virology Journal 2023 ;Volum 20. s. 1-11 UiO OSLOMET AHUS KREFTREG
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Rounge, Trine Ballestad. Building epigenetic clocks for estimating accelerating aging in patients with testicular cancer treated with cisplatin-based chemotherapy.. Meeting Abstract | 2023 ASCO Annual Meeting I; 2023-06-02 - 2023-06-06 KREFTREG UiO
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8. |
Rumbavicius, Ignas; Rounge, Trine Ballestad; Rognes, Torbjørn. HoCoRT: host contamination removal tool. BMC Bioinformatics 2023 ;Volum 24.(1) s. - KREFTREG UiO OUS
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9. |
Senthakumaran, Thulasika; Moen, Aina Elisabeth Fossum; Tannæs, Tone Møller; Endres, Alexander; Brackmann, Stephan Andreas; Rounge, Trine Ballestad; Bemanian, Vahid; Tunsjø, Hege. Microbial dynamics with CRC progression: a study of the mucosal microbiota at multiple sites in cancers, adenomatous polyps, and healthy controls. European Journal of Clinical Microbiology and Infectious Diseases 2023 ;Volum 42. s. 305-322 OSLOMET FHI UiO AHUS KREFTREG
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10. |
Umu, Sinan Ugur; Paynter, Vanessa Molin; Trondsen, Håvard; Buschmann, Tilo; Rounge, Trine Ballestad; Peterson, Kevin J.; Fromm, Bastian. Accurate microRNA annotation of animal genomes using trained covariance models of curated microRNA complements in MirMachine. Cell Genomics 2023 ;Volum 3:100348.(8) s. 1-15 UiO UiT KREFTREG
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11. |
Wojewodzic, Marcin Wlodzimierz; Burton, Joshua; Rounge, Trine Ballestad; Haugen, Trine B.. Pre-diagnostic circulating RNAs networks identify testicular germ cell tumour susceptibility genes. 22nd European Testis Workshop; 2023-06-18 - 2023-06-22 OSLOMET KREFTREG
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12. |
Wojewodzic, Marcin Wlodzimierz; Sydhagen, Kristin Aurora; Rounge, Trine Ballestad. Building epigenetic clocks for estimating accelerating aging in patients with testicular cancer treated with cisplatin-based chemotherapy.. Journal of Clinical Oncology 2023 ;Volum 41. Suppl. 16 s. - UiO KREFTREG
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2022
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13. |
Avershina, Ekaterina; Birkeland, Einar Elvbakken; Berstad, Paula; Hoff, Geir Svein; Rounge, Trine Ballestad. Total neoplastic polyp volume is correlated to several bacterial taxa in faecal immunochemical test-positive CRC-screening participants.. Microbiome Interactions in Health and Disease; 2022-10-24 - 2022-10-26 UiO KREFTREG
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14. |
Avershina, Ekaterina; Birkeland, Einar Elvbakken; Berstad, Paula; Hoff, Geir Svein; Rounge, Trine Ballestad. Total neoplastic polyp volume is correlated to several bacterial taxa in faecal immunochemical test-positive CRC-screening participants.. The 9th National Microbiota Conference; 2022-11-10 - 2022-11-10 UiO KREFTREG
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15. |
Blandino, Alice; Scherer, Dominique; Rounge, Trine Ballestad; Umu, Sinan Ugur; Boekstegers, Felix; Barahona Ponce, Carol; Marcelain, Katherine; Gárate-Calderón, Valentina; Waldenberger, Melanie; Morales, Erik; Rojas, Armando; Munoz, César; Retamales, Javier; de Toro, Gonzalo; Barajas, Olga; Rivera, María Teresa; Cortés, Analía; Loader, Denisse; Saavedra, Javiera; Gutiérrez, Lorena; Ortega, Alejandro; Bertrán, Maria Enriqueta; Gabler, Fernando; Campos, Mónica; Alvarado, Juan; Moisán, Fabrizio; Spencer, Loreto; Nervi, Bruno; Carvajal-Hausdorf, Daniel E.; Losada, Héctor; Almau, Mauricio; Fernández, Plinio; Gallegos, Ivan; Olloquequi, Jordi; Fuentes-Guajardo, Macarena; Gonzalez-Jose, Rolando; Bortolini, Maria Cátira; Gallo, Carla; Ruiz Linares, Andres; Rothhammer, Francisco; Bermejo, Justo Lorenzo. Identification of Circulating lncRNAs Associated with Gallbladder Cancer Risk by Tissue-Based Preselection, Cis-eQTL Validation, and Analysis of Association with Genotype-Based Expression. Cancers 2022 ;Volum 14.(3) s. - UiO KREFTREG
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Burton, Joshua; Wojewodzic, Marcin Wlodzimierz; Rounge, Trine Ballestad; Haugen, Trine B.. A Role of the TEX101 Interactome in the Common Aetiology Behind Male Subfertility and Testicular Germ Cell Tumor. Frontiers in Oncology 2022 ;Volum 12. s. - OSLOMET KREFTREG FHI UiO
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17. |
Kværner, Ane Sørlie; Birkeland, Einar Elvbakken; Vinberg, Elina; Hoff, Geir; Hjartåker, Anette; Rounge, Trine Ballestad; Berstad, Paula. Associations of red and processed meat intake with screen-detected colorectal lesions. British Journal of Nutrition 2022 s. 1-36 UiO KREFTREG STHF
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18. |
Langseth, Hilde; Kymre, Kristina; Slyngstad, Tove; Rounge, Trine Ballestad; Gislefoss, Randi Elin; Lauritzen, Marianne. Janus serumbank – jakten på biomarkører for kreft. Norsk Epidemiologi 2022 ;Volum 30.(1-2) s. 87-92 KREFTREG
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19. |
Løvestad, Alexander; Repesa, Adina; Costanzi, Jean-Marc; Lagström, Sonja; Christiansen, Irene Kraus; Rounge, Trine Ballestad; Ambur, Ole Herman. Differences in integration frequencies and APOBEC3 profiles of five high-risk HPV types adheres to phylogeny. Tumour Virus Research 2022 ;Volum 14. s. - OSLOMET AHUS KREFTREG UiO
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20. |
Rostami, Sina; Langseth, Hilde; lyle, robert; Bjørge, Tone; Pestarino, Luca; Rounge, Trine Ballestad. Pre-diagnostic circulating RNAs in endometrial cancer – impact of body mass index. Association of Nordic Cancer Registries (ANCR) Symposium 2022; 2022-09-12 - 2022-09-16 KREFTREG OUS UiB UiO
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21. |
Rounge, Trine Ballestad. Predicting colorectal cancer using gut microbiome. The Norwegian Consortium for Microbial Genomics meeting; 2022-12-08 - 2022-12-08 KREFTREG UiO
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22. |
Umu, Sinan Ugur; Langseth, Hilde; Zuber, Verena; Helland, Åslaug; Lyle, Robert; Rounge, Trine Ballestad. Serum RNAs can predict lung cancer up to 10 years prior to diagnosis. eLIFE 2022 ;Volum 11. s. - KREFTREG UiO OUS FHI
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2021
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23. |
Engberg, Elina; Raju, Sajan; Figueiredo, Rejane A.O.; Weiderpass, Elisabete; Rounge, Trine Ballestad; Viljakainen, Heli. Saliva microbiota differs between children with low and high sedentary screen times. Human Microbiome Journal 2021 ;Volum 20. KREFTREG UiO
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24. |
Istvan, Paula; Birkeland, Einar Elvbakken; Rognes, Torbjørn; Rounge, Trine Ballestad. Profiling gut viruses from metagenomes of Bowel Cancer Screening participants. ISME18; 2021-08-14 - 2021-08-19 UiO
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25. |
Kværner, Ane Sørlie; Birkeland, Einar Elvbakken; Bucher-Johannessen, Cecilie; Vinberg, Elina; Nordby, Jan Inge; Kangas, Harri; Bemanian, Vahid; Ellonen, Pekka; Botteri, Edoardo; Natvig, Erik; Rognes, Torbjørn; Hovig, Eivind; Lyle, Robert; Ambur, Ole Herman; de Vos, Willem M.; Bultman, Scott J; Hjartåker, Anette; Landberg, Rikard; Song, Mingyang; Blix, Hege Salvesen; Ursin, Giske; Randel, Kristin Ranheim; de Lange, Thomas; Hoff, Geir; Holme, Øyvind; Berstad, Paula; Rounge, Trine Ballestad. The CRCbiome study: a large prospective cohort study examining the role of lifestyle and the gut microbiome in colorectal cancer screening participants. BMC Cancer 2021 ;Volum 21. s. - OUS UiO KREFTREG STHF OSLOMET FHI AHUS VV SSHF
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26. |
Lagström, Sonja; Løvestad, Alexander; Umu, Sinan Uğur; Ambur, Ole Herman; Nygård, Mari; Rounge, Trine Ballestad; Christiansen, Irene Kraus. HPV16 and HPV18 type-specific APOBEC3 and integration profiles in different diagnostic categories of cervical samples. Tumour Virus Research 2021 ;Volum 12. KREFTREG OSLOMET AHUS UiO
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27. |
Mandishora, Racheal S. Dube; Rounge, Trine Ballestad; Fitzpatrick, Megan; Christiansen, Hanne Irene Kraus; Ambur, Ole Herman; Lagström, Sonja; Stray-Pedersen, Babill; Tommasino, Massimo; Palefsky, Joel; Chirenje, Zvavahera M.. Self-collected and clinician-collected anal swabs show modest agreement for HPV genotyping. PLOS ONE 2021 ;Volum 16.(4) s. - UiO KREFTREG AHUS OSLOMET OUS
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28. |
Wojewodzic, Marcin; Leithaug, Magnus; Lauritzen, Marianne; Lyle, Robert; Haglund, Sofia; Rubin, Carl-Johan; Ewels, Philip A.; Grotmol, Tom; Rounge, Trine Ballestad. Ultralow amounts of DNA from long-term archived serum samples produce high-quality methylomes. Clinical Epigenetics 2021 ;Volum 13. s. - UiO KREFTREG FHI OUS
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2020
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29. |
Brägelmann, Johannes; Ponce, Carol Barahona; Marcelain, Katherine; Roessler, Stephanie; Goeppert, Benjamin; Ivan, Gallegos; Colombo, Alicia; Sanhueza, Verónica; Morales, Erik; Rivera, María Teresa; Toro, Gonzalo de; Ortega, Alejandro; Müller, Bettina; Gabler, Fernando; Scherer, Dominique; Waldenberger, Melanie; Reischl, Eva; Boekstegers, Felix; Garate‐Calderon, Valentina; Umu, Sinan Uğur; Rounge, Trine Ballestad; Popanda, Odilia; Bermejo, Justo Lorenzo. Epigenome‐wide analysis of methylation changes in the sequence of gallstone disease, dysplasia, and gallbladder cancer. Hepatology 2020 KREFTREG UiO
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30. |
Burton, Joshua; Umu, Sinan Uğur; Langseth, Hilde; Grotmol, Tom; Grimsrud, Tom Kristian; Haugen, Trine B.; Rounge, Trine Ballestad. Serum RNA profiling in the 10-year period prior to diagnosis of testicular germ cell tumour. Frontiers in Oncology 2020 ;Volum 10. s. 1-13 OSLOMET KREFTREG UiO
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31. |
Figueiredo, Rejane Augusta de Oliveira; Kajantie, Eero; Neuvonen, Pertti J.; Rounge, Trine Ballestad; Weiderpass, Elisabete; Viljakainen, Heli. Lifetime antimicrobial use is associated with weight status in early adolescence—A register-based cohort study. Pediatric Obesity 2020 s. 1-10 UiO KREFTREG
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32. |
Keller, Andreas; Fehlmann, Tobias; Backes, Christina; Kern, Fabian; Gislefoss, Randi Elin; Langseth, Hilde; Rounge, Trine Ballestad; Ludwig, Nicole; Meese, Eckart. Competitive learning suggests circulating miRNA profiles for cancers decades prior to diagnosis. RNA Biology 2020 ;Volum 17.(10) s. 1416-1426 KREFTREG UiO
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33. |
Lagström, Sonja; Løvestad, Alexander; Umu, Sinan Uğur; Ambur, Ole Herman; Rounge, Trine Ballestad; Christiansen, Irene Kraus. Chromosomal integration and APOBEC profiles differ between HPV16 and HPV18 positive cervical samples. International Papillomavirus Conference 2020; 2020-07-20 - 2020-07-24 OSLOMET AHUS KREFTREG UiO
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34. |
Lagström, Sonja; van der Weele, Pascal; Rounge, Trine Ballestad; Christiansen, Irene Kraus; King, Audrey J.; Ambur, Ole Herman. Erratum to “HPV16 whole genome minority variants in persistent infections from young Dutch women” (Journal of Clinical Virology (2019) 119 (24–30), (S1386653219301726), (10.1016/j.jcv.2019.08.003)). Journal of Clinical Virology 2020 ;Volum 124. s. - AHUS KREFTREG UiO OSLOMET
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35. |
Løvestad, Alexander; Lagström, Sonja; Christiansen, Irene Kraus; Rounge, Trine Ballestad; Ambur, Ole Herman. Investigating intra-host genomic events of HPV 31, HPV33 and HPV45 positive cervical samples using deep sequencing. International Papillomavirus Conference 2020; 2020-07-20 - 2020-07-24 OSLOMET AHUS UiO
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36. |
Raju, Sajan C.; Viljakainen, Heli; Figueiredo, Rejane A.O.; Neuvonen, Pertti J.; Eriksson, Johan G.; Weiderpass, Elisabete; Rounge, Trine Ballestad. Antimicrobial drug use in the first decade of life influences saliva microbiota diversity and composition. Microbiome 2020 ;Volum 8. s. 1-13 KREFTREG UiO
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37. |
Scherer, Dominique; López, Marcela Dávila; Goeppert, Benjamin; Abrahamsson, Sanna; Silos, Rosa González; Nova, Igor; Marcelain, Katherine; Roa, Juan C.; Ibberson, David; Umu, Sinan Uğur; Rounge, Trine Ballestad; Roessler, Stephanie; Bermejo, Justo Lorenzo. RNA Sequencing of Hepatobiliary Cancer Cell Lines: Data and Applications to Mutational and Transcriptomic Profiling. Cancers 2020 ;Volum 12.(9) s. - KREFTREG UiO
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38. |
Viljakainen, Jannina; Raju, Sajan C.; Viljakainen, Heli; Figueiredo, Rejane Augusta de Oliveira; Roos, Eva; Weiderpass, Elisabete; Rounge, Trine Ballestad. Meal Regularity Plays a Role in Shaping the Saliva Microbiota. Frontiers in Microbiology 2020 ;Volum 11. s. - UiO KREFTREG
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2019
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39. |
Engberg, Elina; Figueiredo, Rejane Augusta de Oliveira; Rounge, Trine Ballestad; Weiderpass, Elisabete; Viljakainen, Heli. Heavy Screen Use on Weekends in Childhood Predicts Increased Body Mass Index in Adolescence: A Three-Year Follow-Up Study. Journal of Adolescent Health 2019 s. 1-8 KREFTREG
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40. |
Bucher-Johannessen, Cecilie; Page, Christian Magnus; Haugen, Trine B.; Wojewodzic, Marcin; Fosså, Sophie Dorothea; Grotmol, Tom; Haugnes, Hege Sagstuen; Rounge, Trine Ballestad. Cisplatin treatment of testicular cancer patients introduces long-term changes in the epigenome. Clinical Epigenetics 2019 ;Volum 11:179. s. 1-13 UNN OUS OSLOMET FHI UiT UiO KREFTREG
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41. |
De Oliveira Figueiredo, Rejane Augusta; Viljakainen, Jannina; Viljakainen, Heli; Roos, Eva; Rounge, Trine Ballestad; Weiderpass, Elisabete. Identifying eating habits in Finnish children: A cross-sectional study. BMC Public Health 2019 ;Volum 19.(312) KREFTREG UiT
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42. |
Engberg, Elina; Figueiredo, Rejane Augusta de Oliveira; Rounge, Trine Ballestad; Weiderpass, Elisabete; Viljakainen, Heli. Heavy screen users are the heaviest among 10,000 children. Scientific Reports 2019 ;Volum 9.(1) s. 11158- KREFTREG
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43. |
Figueiredo, Rejane Augusta de Oliveira; Simola-Ström, Sabina; Rounge, Trine Ballestad; Viljakainen, Heli; Eriksson, Johan G.; Roos, Eva; Weiderpass, Elisabete. Cohort Profile: The Finnish Health in Teens (Fin-HIT) study: A population-based study. International Journal of Epidemiology 2019 ;Volum 48.(1) s. 22-24H UiT KREFTREG
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44. |
Lagström, Sonja; Umu, Sinan Uğur; Lepistö, Maija; Ellonen, Pekka; Meisal, Roger; Christiansen, Irene Kraus; Ambur, Ole Herman; Rounge, Trine Ballestad. TaME-seq: An efficient sequencing approach for characterisation of HPV genomic variability and chromosomal integration. Scientific Reports 2019 ;Volum 9:524. s. 1-12 AHUS KREFTREG UiO OSLOMET
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45. |
Lagström, Sonja; van der Weele, Pascal; Rounge, Trine Ballestad; Christiansen, Irene Kraus; King, Audrey; Ambur, Ole Herman. HPV16 whole genome minority variants in persistent infections from young Dutch women. Journal of Clinical Virology 2019 ;Volum 119. s. 24-30 AHUS UiO OSLOMET KREFTREG
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46. |
Raju, Sajan C.; Lagström, Sonja; Ellonen, Pekka; de Vos, Willem M.; Eriksson, Johan G.; Weiderpass, Elisabete; Rounge, Trine Ballestad. Gender-specific associations between saliva microbiota and body size. Frontiers in Microbiology 2019 ;Volum 10:767. s. 1-10 KREFTREG UiT
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47. |
Rounge, Trine Ballestad; Lauritzen, Marianne; Erlandsen, Sten Even; Langseth, Hilde; Holmen, Oddgeir Lingaas; Gislefoss, Randi Elin. Ultralow amounts of DNA from long-term archived serum samples produce quality genotypes. European Journal of Human Genetics 2019 KREFTREG NTNU
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48. |
Umu, Sinan Uğur; Langseth, Hilde; Keller, Andreas; Meese, Eckart; Helland, Åslaug; Lyle, Robert; Rounge, Trine Ballestad. A 10-year prediagnostic follow-up study shows that serum RNA signals are highly dynamic in lung carcinogenesis. Molecular Oncology 2019 ;Volum 14.(2) s. 235-247 UiO KREFTREG OUS
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49. |
Viljakainen, Heli; Dahlström, Emma; Figueiredo, Rejane; Sandholm, Niina; Rounge, Trine Ballestad; Weiderpass, Elisabete. Genetic risk score predicts risk for overweight and obesity in Finnish preadolescents. Clinical Obesity 2019 ;Volum 9.(6) s. - KREFTREG UiT
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50. |
Viljakainen, Heli T.; Figueiredo, Rejane Augusta de Oliveira; Rounge, Trine Ballestad; Weiderpass, Elisabete. Picky eating - A risk factor for underweight in Finnish preadolescents. Appetite 2019 ;Volum 133. s. 107-114 KREFTREG UiT
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