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2020
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| 1. | Nilsson, Pernille; Solbakken, Monica Hongrø; Schmid, Boris Valentijn; Orr, Russell; Lv, Ruichen; Cui, Yujun; Song, Yajun; Zhang, Yujiang; Baalsrud, Helle Tessand; Tørresen, Ole K.; Stenseth, Nils Christian; Yang, Ruifu; Jakobsen, Kjetill Sigurd; Easterday, William Ryan; Jentoft, Sissel. The Genome of the Great Gerbil Reveals Species-Specific Duplication of an MHCII Gene. Genome Biology and Evolution (GBE) 2020 ;Volume 12.(2) p. 3832-3849 UiO |
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| 2. | Orr, Russell; Sannum, Maja Margret; Boessenkool, Sanne; Di Martino, Emanuela; Gordon, Dennis; Mello, Hannah; Obst, Matthias; Ramsfjell, Mali Hamre; Smith, Abigail M.; Liow, Lee Hsiang. A molecular phylogeny of historical and contemporary specimens of an under‐studied micro‐invertebrate group. Ecology and Evolution 2020 ;Volume 11.(1) p. 309-320 UiO |
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2019
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| 3. | Orr, Russell; Haugen, Marianne Nilsen; Berning, Björn; Bock, Phil; Cumming, Robyn L.; Florence, Wayne; Hirose, Masato; Di Martino, Emanuela; Ramsfjell, Mali Hamre; Sannum, Maja Margret; Smith, Abigail M.; Vieira, Leandro; Waeschenbach, Andrea; Liow, Lee Hsiang. A genome-skimmed phylogeny of a widespread bryozoan family, Adeonidae. BMC Evolutionary Biology 2019 ;Volume 19.(235) UiO |
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2018
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| 4. | Orr, Russell; Waeschenbach, Andrea; Enevoldsen, Emily; Boeve, Jeroen Pieter; Haugen, Marianne Nilsen; Voje, Kjetil L.; Porter, Joanne; Zagorsek, Kamil; Smith, Abigail M.; Gordon, Dennis; Liow, Lee Hsiang. Bryozoan genera Fenestrulina and Microporella no longer confamilial; multi-gene phylogeny supports separation. Zoological Journal of the Linnean Society 2018 p. 1-10 UiO |
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| 5. | Orr, Russell; Zhao, Sen; Klaveness, Dag; Yabuki, Akinori; Ikeda, Keiji; Makoto, Watanabe M.; Shalchian-Tabrizi, Kamran. Enigmatic diphyllatea eukaryotes: culturing and targeted PacBio RS amplicon sequencing reveals a higher order taxonomic diversity and global distribution. BMC Evolutionary Biology 2018 ;Volume 18.(115) p. 1-13 OUS UiO |
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2017
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| 6. | Krabberød, Anders Kristian; Orr, Russell; Bråte, Jon; Kristensen, Tom; Bjørklund, Kjell Rasmus; Shalchian-Tabrizi, Kamran. Single cell transcriptomics, mega-phylogeny and the genetic basis of morphological innovations in Rhizaria. Molecular Biology and Evolution (MBE) 2017 UiO |
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| 7. | Orr, Russell. Deep Genome Initiative. CIME annual meeting; 2017-10-27 - 2017-10-27 UiO |
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| 8. | Orr, Russell. Genome Dynamics in early eukaryote evolution an update!. VIB presentation; 2017-06-28 - 2017-06-28 UiO |
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| 9. | Orr, Russell. Genome dynamics in early eukaryote evolution, progress rapport!. International Congress of Protistology; 2017-07-30 - 2017-08-04 UiO |
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| 10. | Orr, Russell. In Silico Prediction of Ligand-Binding Sites of Plant Receptor Kinases Using Conservation Mapping. Plant Receptor Kinases: Methods and Protocols. Humana Press 2017 (ISBN 978-1-4939-7063-6) 196 p. Msphere(1621) UiO |
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| 11. | Orr, Russell; Rombauts, S; Van De Peer, Yves; Shalchian-Tabrizi, Kamran. Erratum to "Draft Genome Sequences of Two Unclassified Bacteria, Sphingomonas sp. Strains IBVSS1 and IBVSS2, Isolated from Environmental Samples" [Genome Announc., 2017, 5 (34):e00894-17.] Doi: 10.1128/genomeA.00894-17.. Microbiology Resource Announcements (MRA) 2017 ;Volume 5.(41) UiO |
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| 12. | Orr, Russell; Rombauts, Stephane; Van de Peer, Yves; Shalchian-Tabrizi, Kamran. Draft genome sequences of two unclassified bacteria, Hydrogenophaga sp. strains IBVHS1 and IBVHS2, isolated from environmental samples. Microbiology Resource Announcements (MRA) 2017 ;Volume 5.(34) UiO |
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| 13. | Orr, Russell; Rombauts, Stephane; Van de Peer, Yves; Shalchian-Tabrizi, Kamran. Draft genome sequences of two unclassified bacteria, Sphingomonas sp. strains IBVSS1 and IBVSS2, isolated from environmental samples. Microbiology Resource Announcements (MRA) 2017 ;Volume 5:e00894-17.(34) p. 1-3 UiO |
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| 14. | Orr, Russell; Rombauts, Stephane; Van de Peer, Yves; Shalchian-Tabrizi, Kamran. Draft genome sequences of two unclassified Chitinophagaceae bacteria, IBVUCB1 and IBVUCB2, isolated from environmental samples. Microbiology Resource Announcements (MRA) 2017 ;Volume 5.(33) p. 1-3 UiO |
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| 15. | Orr, Russell; Rombauts, Stephane; Van de Peer, Yves; Shalchian-Tabrizi, Kamran. Erratum: "Draft genome sequences of two unclassified Chitinophagaceae bacteria, IBVUCB1 and IBVUCB2, isolated from environmental samples" [Genome Announc, 5, 33, (2017), (e00787-17)] DOI:10.1128/genomeA.00787-17. Microbiology Resource Announcements (MRA) 2017 ;Volume 5.(41:e01152-17) p. 1-1 UiO |
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| 16. | Orr, Russell; Shalchian-Tabrizi, Kamran; Van de Peer, Yves; Rombauts, S. Draft Genome Sequences of Two Unclassified Bacteria, Sphingomonas sp. Strains IBVSS1 and IBVSS2, Isolated from Environmental Samples. Microbiology Resource Announcements (MRA) 2017 ;Volume 5.(34) UiO |
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| 17. | Orr, Russell; Shalchian-Tabrizi, Kamran; Van de Peer, Yves; Rombauts, S. Draft genome Sequences of two Unclassified Chitinophagaceae bacteria, IBVUCB1 and IBVUCB2, Isolated from Environmental Samples. Microbiology Resource Announcements (MRA) 2017 UiO |
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2016
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| 18. | Enevoldsen, Emily; Boeve, Jeroen; Orr, Russell; Waeschenbach, Andrea; Liow, Lee Hsiang. Advancing bryozoan phylogenetics: mitochondrial and nuclear genes. International Bryozoology Association Meeting; 2016-04-10 - 2016-04-15 UiO |
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| 19. | Orr, Russell. Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages. VIB seminar; 2016-09-26 - 2016-09-26 UiO |
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| 20. | Orr, Russell. Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages. Inven2 seminar; 2016-04-21 - 2016-04-21 UiO |
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| 21. | Orr, Russell. PacBio sequencing reveals the diversity and ecology of a deeply diverging eukaryote lineage.. Evogene seminar series; 2016-02-01 - 2016-02-01 UiO |
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| 22. | Orr, Russell; Zhao, Sen; Yabuki, Akinori; Shalchian-Tabrizi, Kamran. PacBio sequencing reveals the diversity and ecology of a deeply diverging eukaryote lineage. EMBO | EMBL Symposium: A New Age of Discovery for Aquatic Microeukaryotes; 2016-01-26 - 2016-01-29 UiO |
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2015
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| 23. | Murray, Shauna A.; Diwan, Rutuja; Orr, Russell; Kohli, Gurjeet S.; John, Uwe. Gene duplication, loss and selection in the evolution of saxitoxin biosynthesis in alveolates. Molecular Phylogenetics and Evolution 2015 ;Volume 92. p. 165-180 UiO |
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| 24. | Orr, Russell. Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages. Norsk Algeforening årsmøte; 2015-04-29 - 2015-04-29 UiO |
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| 25. | Orr, Russell. Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages. ASLO 2105; 2015-02-23 - 2015-02-27 UiO |
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| 26. | Stø, Ida Myhrer; Orr, Russell; Fooyontphanich, Kim; Jin, Xu; Knutsen, Jonfinn Mordekai Blix; Fischer, Urs; Tranbarger, Timothy J.; Nordal, Inger; Aalen, Reidunn B.. Conservation of the abscission signaling peptide IDA during Angiosperm evolution: Withstanding genome duplications and gain and loss of the receptors HAE/HSL2. Frontiers in Plant Science 2015 ;Volume 6.(OCTOBER) UiO |
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2014
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| 27. | Enevoldsen, Emily; Liow, Lee Hsiang; Voje, Kjetil L.; Orr, Russell; Shalchian-Tabrizi, Kamran; Krabberød, Anders Kristian. Macroevolution through molecular and morphological lenses: a history of microporellids. CEES Annual Student Conference; 2014-10-21 - 2014-10-22 UiO |
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| 28. | Murray, Shauna A.; Hoppenrath, Mona; Orr, Russell; Bolch, Christopher; John, Uwe; Diwan, Rutuja; Yauwenas, Rouna; Harwood, Tim; de Salas, Miguel; Neilan, Brett A.; Hallegraeff, Gustaaf. Alexandrium diversaporum sp. nov., a new non-saxitoxin producing species: Phylogeny, morphology and sxtA genes. Harmful Algae 2014 ;Volume 31. p. 54-65 UiO |
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| 29. | Orr, Russell. Genome dynamics in early eukaryotic evolution: importance of enigmatic lineages. EVOGENE seminar series; 2014-03-24 - 2014-03-24 UiO |
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| 30. | Orr, Russell. Genome dynamics in early eukaryotic evolution: importance of enigmatic lineages. JAMSTEC presentation; 2014-06-11 - 2014-06-11 UiO |
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| 31. | Orr, Russell. Genome dynamics in early eukaryotic evolution: importance of enigmatic lineages. Tsukuba University Presentation; 2014-06-23 - 2014-06-23 UiO |
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| 32. | Stensrud, Øyvind; Orr, Russell; Reier-Røberg, Kjetil; Schumacher, Trond; Høiland, Klaus. Phylogenetic relationships in Cortinarius with focus on North European species. Karstenia 2014 ;Volume 54.(2) p. 57-71 USN UiO |
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2013
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| 33. | Orr, Russell; Stüken, Anke; Murray, Shauna A.; Jakobsen, Kjetill Sigurd. Evolution and Distribution of Saxitoxin Biosynthesis in Dinoflagellates. Marine Drugs 2013 ;Volume 11.(8) p. 2814-2828 UiO |
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| 34. | Orr, Russell; Stüken, Anke; Murray, Shauna A.; Jakobsen, Kjetill Sigurd. Evolutionary Acquisition and Loss of Saxitoxin Biosynthesis in Dinoflagellates: the Second "Core" Gene, sxtG. Applied and Environmental Microbiology 2013 ;Volume 79.(7) p. 2128-2136 UiO |
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2012
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| 35. | Dittami, Simon; Riisberg, Ingvild; John, Uwe; Orr, Russell; Jakobsen, Kjetill Sigurd; Edvardsen, Bente. Analysis of Expressed Sequence Tags from the Marine Microalga Pseudochattonella farcimen (Dictyochophyceae). Protist 2012 ;Volume 163.(1) p. 143-161 UiO |
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| 36. | Murray, Shauna A.; Wiese, Maria; Neilan, Brett A.; Orr, Russell; de Salas, Miguel; Brett, Steve; Hallegraeff, Gustaaf. A reinvestigation of saxitoxin production and sxtA in the 'non-toxic' Alexandrium tamarense Group V clade. Harmful Algae 2012 ;Volume 18. p. 96-104 UiO |
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| 37. | Orr, Russell; Murray, Shauna A.; Stüken, Anke; Rhodes, Lesley; Jakobsen, Kjetill Sigurd. When Naked Became Armored: An Eight-Gene Phylogeny Reveals Monophyletic Origin of Theca in Dinoflagellates. PLOS ONE 2012 ;Volume 7.(11) p. - UiO |
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| 38. | Stüken, Anke; Figueroa, Rosa; Orr, Russell; Jakobsen, Kjetill Sigurd. Is sxt gene copy number related to saxitoxin synthesis?. Marine Microbes; 2012-06-23 - 2012-06-29 UiO |
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2011
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| 39. | Orr, Russell; Stüken, Anke; Rundberget, Thomas; Eikrem, Wenche; Jakobsen, Kjetill Sigurd. Improved phylogenetic resolution of toxic and non-toxic Alexandrium strains using a concatenated rDNA approach. Harmful Algae 2011 ;Volume 10.(6) p. 676-688 UiO VETINST |
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| 40. | Stüken, Anke; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Neilan, Brett A.; Jakobsen, Kjetill Sigurd. Discovery of nucelar-encoded genes for the neurotoxin saxitoxin in dinoflagellates. 2nd Norwegian Microbiology Meeting; 2011-09-14 - 2011-09-16 UiB UiO |
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| 41. | Stüken, Anke; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Neilan, Brett A.; Jakobsen, Kjetill Sigurd. Discovery of nucelar-encoded genes for the neurotoxin saxitoxin in dinoflagellates. 9th International Conference on Modern and Fossil Dinoflagellates; 2011-08-28 - 2011-09-02 UiB UiO |
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| 42. | Stüken, Anke Corinna; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Neilan, Brett A.; Jakobsen, Kjetill Sigurd. Discovery of Nuclear-Encoded Genes for the Neurotoxin Saxitoxin in Dinoflagellates. PLOS ONE 2011 ;Volume 6.(5) UiB UiO |
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2010
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| 43. | Kellmann, Ralf; Stüken, Anke; Orr, Russell J. S.; Svendsen, Helene M.; Jakobsen, Kjetill S.. Biosynthesis and Molecular Genetics of Polyketides in Marine Dinoflagellates. Marine Drugs 2010 ;Volume 8.(4) p. 1011-1048 UiB UiO |
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| 44. | Dittami, Simon; Riisberg, Ingvild; John, Uwe; Orr, Russell; Shalchian-Tabrizi, Kamran; Jakobsen, Kjetill Sigurd; Edvardsen, Bente. Analysis of expressed sequence tags from the ichtyotoxic dictyochophyte Pseudochattonella farcimen. Conference on Harmful ALgae; 2010-11-01 - 2010-11-05 UiO |
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| 45. | Orr, Russell; Stüken, Anke; Rundberget, Thomas; Eikrem, Wenche; Jakobsen, Kjetill Sigurd. Improved phylogenetic resolution of toxic and non-toxic Alexandrium strains using a concatenated rDNA approach. 9th International Conference on Modern and Fossil Dinoflagellates; 2010-11-30 NIVA UiO VETINST |
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| 46. | Orr, Russell; Stüken, Anke; Rundberget, Thomas; Eikrem, Wenche; Jakobsen, Kjetill Sigurd. Improved phylogenetic resolution of toxic and non-toxic Alexandrium strains using a concatenated rDNA approach. Algesymposium; 2010-11-30 NIVA UiO VETINST |
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| 47. | Stüken, Anke; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Mihali, Troco Kaan; Neilan, Brett A.; Jakobsen, Kjetill Sigurd. Saxitoxin gene identified in dinoflagellates. 14th International Conference on Harmful Algae, HAB2010; 2010-09-01 - 2010-09-05 UiB UiO |
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2009
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| 48. | Riisberg, Ingvild; Orr, Russell; Kluge, Ragnhild; Shalchian-Tabrizi, Kamran; Bowers, HA; Vishwanath, Patil; Edvardsen, Bente; Jakobsen, Kjetill Sigurd. Seven Gene Phylogeny of Heterokonts. Protist 2009 ;Volume 160.(2) p. 191-204 UiO NMBU |
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| 49. | Kumar, Surendra; Skjæveland, Åsmund; Orr, Russell; Enger, Pål; Ruden, Torgeir Andersen; Mevik, Bjørn-Helge; Burki, Fabien; Botnen, Andreas Valeur; Shalchian-Tabrizi, Kamran. AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses. BMC Bioinformatics 2009 ;Volume 10. UiO |
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| 50. | Minge, Marianne Aastebøl; Silberman, Jeffrey; Orr, Russell; Cavalier-Smith, Thomas; Shalchian-Tabrizi, Kamran; Burki, Fabien; Skjæveland, Åsmund; Jakobsen, Kjetill Sigurd. Evolutionary position of breviate amoebae and the primary eukaryote divergence. Proceedings of the Royal Society of London. Biological Sciences 2009 ;Volume 276.(1657) p. 597-604 UiO |
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