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Showing results 1-11 of 11
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2023
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Polak, Justyna; Wagnerberger, Johanna Henny; Torsetnes, Silje Bøen; Lindeman, Ida; Høglund, Rune Alexander Aamodt; Vartdal, Frode; Sollid, Ludvig Magne; Lossius, Andreas. Single-cell transcriptomics combined with proteomics of intrathecal IgG reveal transcriptional heterogeneity of oligoclonal IgG-secreting cells in multiple sclerosis. Frontiers in Cellular Neuroscience 2023 ;Volume 17. p. - OUS UiO AHUS
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2022
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Lindeman, Ida; Polak, Justyna; Qiao, Shuo-Wang; Holmøy, Trygve; Høglund, Rune Alexander; Vartdal, Frode; Berg-Hansen, Pål; Sollid, Ludvig Magne; Lossius, Andreas. Stereotyped B-cell responses are linked to IgG constant region polymorphisms in multiple sclerosis. European Journal of Immunology 2022 ;Volume 52.(4) p. 550-565 OUS UiO AHUS
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2021
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Lindeman, Ida; Sollid, Ludvig Magne. Single-cell approaches to dissect adaptive immune responses involved in autoimmunity: the case of celiac disease. Mucosal Immunology 2021 ;Volume 15. p. 51-63 UiO OUS
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Lindeman, Ida; Zhou, Chunyan; Eggesbø, Linn Margrethe; Miao, Zhichao; Polak, Justyna; Lundin, Knut Erik Aslaksen; Jahnsen, Jørgen; Qiao, Shuo-Wang; Iversen, Rasmus; Sollid, Ludvig Magne. Longevity, clonal relationship, and transcriptional program of celiac disease-specific plasma cells. Journal of Experimental Medicine (JEM) 2021 ;Volume 218:e20200852.(2) p. 1-16 AHUS OUS UiO
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2020
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Mikocziova, Ivana; Gidoni, Moriah; Lindeman, Ida; Peres, Ayelet; Snir, Omri; Yaari, Gur; Sollid, Ludvig Magne. Polymorphisms in human immunoglobulin heavy chain variable genes and their upstream regions. Nucleic Acids Research (NAR) 2020 ;Volume 48.(10) p. 5499-5510 OUS UiO
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2019
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Gidoni, Moriah; Snir, Omri; Peres, Ayelet; Polak, Pazit; Lindeman, Ida; Mikocziova, Ivana; Sarna, Vikas Kumar; Lundin, Knut Erik Aslaksen; Clouser, Christopher; Vigneault, Francois; Collins, Andrew M.; Sollid, Ludvig Magne; Yaari, Gur. Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping. Nature Communications 2019 ;Volume 10:628. p. 1-14 UiO OUS
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Lindeman, Ida; Stubbington, Michael J.T.. Antigen Receptor Sequence Reconstruction and Clonality Inference from scRNA-Seq Data. I: Computational Methods for Single-Cell Data Analysis. Humana Press 2019 ISBN 978-1-4939-9056-6. p. 223-249 UiO
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Miragaia, Ricardo J.; Gomes, Tomás; Chomka, Agnieszka; Jardine, Laura; Riedel, Angela; Hegazy, Ahmed N.; Whibley, Natasha; Tucci, Andrea; Chen, Xi; Lindeman, Ida; Emerton, Guy; Krausgruber, Thomas; Shields, Jacqueline; Haniffa, Muzlifah; Powrie, Fiona; Teichmann, Sarah A.. Single-cell transcriptomics of regulatory T cells reveals trajectories of tissue adaptation. Immunity 2019 ;Volume 50.(2) p. 493-504.e7 UiO OUS
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2018
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Lindeman, Ida; Emerton, Guy; Mamanova, Lira; Snir, Omri; Polanski, Krzysztof; Qiao, Shuo Wang; Sollid, Ludvig Magne; Teichmann, Sarah A; Stubbington, Michael J. T.. BraCeR: B-cell-receptor reconstruction and clonality inference from single-cell RNA-seq. Nature Methods 2018 ;Volume 15.(8) p. 563-565 UiO UiT
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Yao, Ying; Zia, Asima; Wyrozemski, Lukasz Adam; Lindeman, Ida; Sandve, Geir Kjetil; Qiao, Shuo Wang. Exploiting antigen receptor information to quantify index switching in single-cell transcriptome sequencing experiments. PLOS ONE 2018 ;Volume 13.(12) p. 1-17 UiO
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2017
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Schjerven, Hilde; Ayongaba, Etapon Fonabei; Aghajanirefah, Ali; McLaughlin, Jami; Cheng, Donghui; Geng, Huimin; Boyd, Joseph R; Eggesbø, Linn Margrethe; Lindeman, Ida; Heath, Jessica L; Park, Eugene; Witte, Owen N.; Smale, Stephen T.; Frietze, Seth; Müschen, Markus. Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre–B ALL. Journal of Experimental Medicine (JEM) 2017 ;Volume 214.(3) p. 793-814 UiO
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