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Showing results 1-11 of 11

2021
1 Balaban, Gabriel; Grytten, Ivar; Rand, Knut Dagestad; Scheffer, Lonneke; Sandve, Geir Kjetil.
Ten simple rules for quick and dirty scientific programming. PLoS Computational Biology 2021 ;Volume 17:e1008549.(3) p. 1-15
OUS UiO Untitled
 
2020
2 Fan, Qiong; Nørgaard, Rikke Christine; Grytten, Ivar; Ness, Cecilie; Lucas, Christin; Vekterud, Kristin; Södling, Helen; Matthews, Jason; Lemma, Roza Berhanu; Gabrielsen, Odd Stokke; Bindesbøll, Christian; Ulven, Stine Marie; Nebb, Hilde Irene; Grønning-Wang, Line Mariann; Sæther, Thomas.
LXRα Regulates ChREBPα Transactivity in a Target Gene-Specific Manner through an Agonist-Modulated LBD-LID Interaction. Cells 2020 ;Volume 9.(5) p. 1-26
UiO Untitled
 
3 Grytten, Ivar; Rand, Knut Dagestad; Nederbragt, Alexander Johan; Sandve, Geir Kjetil.
Assessing graph-based read mappers against a baseline approach highlights strengths and weaknesses of current methods. BMC Genomics 2020 ;Volume 21.
UiO Untitled
 
2019
4 Fan, Qiong; Nørgaard, Rikke Christine; Grytten, Ivar; Ness, Cecilie Maria; Lucas, Christin; Vekterud, Kristin; Södling, Helen; Matthews, Jason; Lemma, Roza Berhanu; Gabrielsen, Odd Stokke; Bindesbøll, Christian; Ulven, Stine Marie; Nebb, Hilde Irene; Grønning-Wang, Line Mariann; Sæther, Thomas.
LXRα interacts with the glucose-sensing transcription factor ChREBPα to regulate its transcriptional activity.. EMBO | EMBL Symposium: Metabolism Meets Epigenetics; 2019-11-20 - 2019-11-23
UiO Untitled
 
5 Fan, Qiong; Nørgaard, Rikke Christine; Grytten, Ivar; Ness, Cecilie Maria; Lucas, Christin; Vekterud, Kristin; Soedling, Helen; Matthews, Jason; Lemma, Roza Berhanu; Gabrielsen, Odd Stokke; Bindesbøll, Christian; Ulven, Stine Marie; Nebb, Hilde Irene; Grønning-Wang, Line Mariann; Sæther, Thomas.
Open the LID: LXRα regulates ChREBPα transactivity in a target gene-specific manner through an agonist-modulated LBD-LID interaction. BioRxiv 2019 p. -
UiO Untitled
 
6 Grytten, Ivar; Rand, Knut Dagestad; Nederbragt, Alexander Johan; Storvik, Geir Olve; Glad, Ingrid Kristine; Sandve, Geir Kjetil.
Graph Peak Caller: Calling ChIP-seq peaks on graph-based reference genomes. PLoS Computational Biology 2019 ;Volume 15.(2) p. 1-13
UiO Untitled
 
7 Salvatore, Stefania; Rand, Knut Dagestad; Grytten, Ivar; Ferkingstad, Egil; Domanska, Diana; Holden, Lars; Gheorghe, Marius; Mathelier, Anthony; Glad, Ingrid Kristine; Sandve, Geir Kjetil.
Beware the Jaccard: the choice of similarity measure is important and non-trivial in genomic colocalisation analysis. Briefings in Bioinformatics 2019 p. 1-8
NR OUS UiO Untitled
 
2018
8 Fan, Qiong; Nørgaard, Rikke Christine; Grytten, Ivar; Ulven, Stine Marie; Lucas, Christin; Bindesbøll, Christian; Lemma, Roza Berhanu; Gabrielsen, Odd Stokke; Grønning-Wang, Line Mariann; Nebb, Hilde Irene; Sæther, Thomas.
LXRα interacts with the glucose-sensing transcription factor ChREBPα and increases its transcriptional activity. 2018 MolMed Retreat; 2018-10-10 - 2018-10-10
UiO Untitled
 
2017
9 Rand, Knut Dagestad; Grytten, Ivar; Nederbragt, Alexander Johan; Storvik, Geir Olve; Glad, Ingrid Kristine; Sandve, Geir Kjetil.
Coordinates and intervals in graph-based reference genomes. BMC Bioinformatics 2017 ;Volume 18:263. p. 1-8
UiO Untitled
 
10 Simovski, Boris; Vodak, Daniel; Gundersen, Sveinung; Domanska, Diana Ewa; Azab, Abdulrahman; Holden, Lars; Holden, Marit; Grytten, Ivar; Rand, Knut Dagestad; Drabløs, Finn; Johansen, Morten; Mora Ortiz, Antonio Carlos; Lund-Andersen, Christin; Fromm, Bastian; Eskeland, Ragnhild; Gabrielsen, Odd Stokke; Ferkingstad, Egil; Nakken, Sigve; Bengtsen, Mads; Nederbragt, Alexander Johan; Thorarensen, Hildur Sif; Akse, Johannes Andreas; Glad, Ingrid Kristine; Hovig, Johannes Eivind; Sandve, Geir Kjetil.
GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome. GigaScience 2017 ;Volume 6.(7) Suppl. https://academic.oup p. 1-12
NR NTNU OUS UiO Untitled
 
2016
11 Børnich, Claus; Grytten, Ivar; Hovig, Johannes Eivind; Paulsen, Jonas; Cech, Martin; Sandve, Geir Kjetil.
Galaxy Portal: Interacting with the galaxy platform through mobile devices. Bioinformatics 2016 ;Volume 32.(11) p. 1743-1745
OUS UiO Untitled