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Showing results 1-32 of 32

2019
1 Koehler, Christian; Thiede, Bernd.
Predominant cleavage of proteins N-terminal to serines and threonines using scandium(III) triflate. Journal of Biological Inorganic Chemistry 2019 ;Volume 25. p. 61-66
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2018
2 Bollineni, Ravi Chand; Koehler, Christian; Gislefoss, Randi Elin; Anonsen, Jan Haug; Thiede, Bernd.
Author Correction: Large-scale intact glycopeptide identification by Mascot database search. Scientific Reports 2018 ;Volume 8.
KREFTREG UiO Untitled
 
3 Bollineni, Ravi Chand; Koehler, Christian; Gislefoss, Randi Elin; Anonsen, Jan Haug; Thiede, Bernd.
Large-scale intact glycopeptide identification by Mascot database search. Scientific Reports 2018 ;Volume 8.
KREFTREG UiO Untitled
 
4 Dugarte, Maria Eugenia Chollet; Andersen, Elisabeth; Skarpen, Ellen; Myklebust, Christiane Filion; Koehler, Christian; Morth, Jens Preben; Chuansumrit, Ampaiwan; Pinotti, Mirko; Bernardi, Francesco; Thiede, Bernd; Sandset, Per Morten; Skretting, Grethe.
Factor VII deficiency: Unveiling the cellular and molecular mechanisms underlying Three model alterations of the enzyme catalytic domain. Biochimica et Biophysica Acta - Molecular Basis of Disease 2018 ;Volume 1864.(3) p. 660-667
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5 Tran, Trung; Bollineni, Ravi Chand; Koehler, Christian; Thiede, Bernd.
Absolute two-point quantification of proteins using dimethylated proteotypic peptides. The Analyst 2018 ;Volume 143.(18) p. 4359-4365
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2017
6 Koehler, Christian; Bollineni, Ravi Chand; Thiede, Bernd.
Application of the half decimal place rule to increase the peptide identification rate. Rapid Communications in Mass Spectrometry 2017 ;Volume 31.(2) p. 227-233
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7 Tran, Trung; Bollineni, Ravi Chand; Strozynski, Margarita Anna; Koehler, Christian; Thiede, Bernd.
Identification of Alternative Splice Variants Using Unique Tryptic Peptide Sequences for Database Searches. Journal of Proteome Research 2017 ;Volume 16.(7) p. 2571-2578
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2015
8 Arntzen, Magnus Øverlie; Boddie, Paul; Frick, Rahel; Koehler, Christian; Thiede, Bernd.
Consolidation of proteomics data in the Cancer proteomics database. Proteomics 2015 ;Volume 15.(22) p. 3765-3771
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9 Chymkowitch, Pierre; Nguéa P, Aurélie; Aanes, Håvard; Koehler, Christian; Thiede, Bernd; Lorenz, Susanne; Meza, Leonardo Zepeda; Klungland, Arne; Enserink, Jorrit.
Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes. Genome Research 2015 ;Volume 25.(6) p. 897-906
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10 Koehler, Christian; Arntzen, Magnus Øverlie; Thiede, Bernd.
The impact of carbon-13 and deuterium on relative quantification of proteins using stable isotope diethyl labeling. Rapid Communications in Mass Spectrometry 2015 ;Volume 29.(9) p. 830-836
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11 Øverbye, Anders; Skotland, Tore; Koehler, Christian; Thiede, Bernd; Seierstad, Therese; Berge, Viktor; Sandvig, Kirsten; Llorente, Alicia.
Identification of prostate cancer biomarkers in urinary exosomes. OncoTarget 2015 ;Volume 6.(30) p. 30357-30376
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2013
12 Koehler, Christian; Arntzen, Magnus; De Souza, Gustavo Antonio; Thiede, Bernd.
An Approach for Triplex-Isobaric Peptide Termini Labeling (Triplex-IPTL). Analytical Chemistry 2013 ;Volume 85.(4) p. 2478-2485
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13 Størvold, Gro Leite; Landskron, Johannes; Strozynski, Margarita Anna; Arntzen, Magnus; Koehler, Christian; Kalland, Maria Elisabeth; Tasken, Kjetil; Thiede, Bernd.
Quantitative profiling of tyrosine phosphorylation revealed changes in the activity of the T cell receptor signaling pathway upon cisplatin-induced apoptosis. Journal of Proteomics 2013 ;Volume 91. p. 344-357
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14 Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, Achim; Stein, Robert; Zimny-Arndt, Ursula; Schmid, Monika; Jungblut, Peter R..
High Resolution Quantitative Proteomics of HeLa Cells Protein Species Using Stable Isotope Labeling with Amino Acids in Cell Culture(SILAC), Two-Dimensional Gel Electrophoresis(2DE) and Nano-Liquid Chromatograpohy Coupled to an LTQ-OrbitrapMass Spectrometer. Molecular & Cellular Proteomics 2013 ;Volume 12.(2) p. 529-538
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2012
15 Koehler, Christian; Arntzen, Magnus; Treumann, Achim; Thiede, Bernd.
A Rapid Approach for Isobaric Peptide Termini Labeling. Methods in molecular biology 2012 ;Volume 893. p. 129-141
UiO NMBU Untitled
 
16 Koehler, Christian; Arntzen, Magnus; Treumann, Achim; Thiede, Bernd.
Comparison of data analysis parameters and MS/MS fragmentation techniques for quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Analytical and Bioanalytical Chemistry 2012 ;Volume 404.(4) p. 1103-1114
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17 Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, A; Stein, Robert; Zimny-Amdt, Ursula; Schmid, Monika; Jungblut, Peter R..
Protein species high resolution quantitative proteomics of HeLa cells using SILAC-2-DE-nanoLC/LTQ-Orbitrap mass spectrometry. Molecular & Cellular Proteomics 2012 p. -
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2011
18 Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim; Thiede, Bernd.
IsobariQ: Software for Isobaric Quantitative Proteomics using IPTL, iTRAQ, and TMT. Journal of Proteome Research 2011 ;Volume 10.(2) p. 913-920
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19 Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim; Thiede, Bernd.
IsobariQ: Software for isobaric quantitative proteomics using IPTL, iTRAQ and TMT. 10th World Congress of Human Proteome Organization HUPO; 2011-09-04 - 2011-09-07
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20 Arntzen, Magnus; Koehler, Christian; Treumann, Achim; Thiede, Bernd.
Quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Methods in molecular biology 2011 ;Volume 753. p. 65-76
OUS UiO NMBU Untitled
 
21 Koehler, Christian; Arntzen, Magnus; Strozynski, Margarita Anna; Treumann, Achim; Thiede, Bernd.
Isobaric Peptide Termini Labeling Utilizing Site-Specific N-Terminal Succinylation. Analytical Chemistry 2011 ;Volume 83.(12) p. 4775-4781
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22 Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Panse, Isabel; Strozynski, Margarita Anna; Donaldson, Ian Matthew; Thiede, Bernd; Kroening, Mario.
Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids 2011 ;Volume 41.(2) p. 363-385
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23 Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna; Kloss, Alexander; Zimny-Arndt, Ursula; Jungblut, Peter R.; Thiede, Bernd.
Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids 2011 ;Volume 41.(2) p. 351-361
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2010
24 Dørum, Siri; Arntzen, Magnus; Qiao, Shuo Wang; Holm, Anders; Koehler, Christian; Thiede, Bernd; Sollid, Ludvig Magne; Fleckenstein, Burkhard.
The Preferred Substrates for Transglutaminase 2 in a Complex Wheat Gluten Digest Are Peptide Fragments Harboring Celiac Disease T-Cell Epitopes. PLOS ONE 2010 ;Volume 5.(11)
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25 Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Kröning, Mario; Panse, Isabel; Strozynski, Margarita Anna; Donaldson, Ian M; Thiede, Bernd.
Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids 2010
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26 De Souza, Gustavo; Fortuin, Suereta; Aguilar, Diana; Pando, Rogelio Hernandez; McEvoy, Christopher R.E.; van Helden, Paul D.; Koehler, Christian J; Thiede, Bernd; Warren, Robin M; Wiker, Harald G.
Using a Label-free Proteomics Method to Identify Differentially Abundant Proteins in Closely Related Hypo- and Hypervirulent Clinical Mycobacterium tuberculosis Beijing Isolates. Molecular & Cellular Proteomics 2010 ;Volume 9.(11) p. 2414-2423
HAUKELAND UiB UiO Untitled
 
27 Saunders, Threrese Solstad; Bjørgo, Elisa; Koehler, Christian; Strozynski, Margarita Anna; Torgersen, Knut Martin; Tasken, Kjetil; Thiede, Bernd.
Quantitative proteome analysis of detergent-resistant membranes identifies the differential regulation of protein kinase C isoforms in apoptotic T cells. Proteomics 2010 ;Volume 10.(15) p. 2758-2768
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28 Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna; Klof, Alexander; Zimmy-Arndt, Ursula; Jungblut, Peter R.; Thiede, Bernd.
Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids 2010
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29 Tomazella, Gisele Guiqardi; daSilva, Idalete; Thomé, Carolina H.; Greene, Lewis J; Koehler, Christian J; Thiede, Bernd; Wiker, Harald G; De Souza, Gustavo.
Analysis of detergent-insoluble and whole cell lysate fractions of resting neutrophils using high-resolution mass spectrometry. Journal of Proteome Research 2010 ;Volume 9.(4) p. 2030-2036
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2009
30 De Souza, Gustavo; Fortuin, Suereta; McEvoy, Christopher R; Pando, Rogelio Hernandez; Koehler, Christian J; Thiede, Bernd; Warren, Robin M; Wiker, Harald G.
A label-free method identified differentially abundant proteins in related M.tuberculosis Beijing strains. HuPO VIII World Congress; 2009-09-26 - 2009-09-30
HAUKELAND UiB Untitled
 
31 de Souza, GA; De Souza, Gustavo; Søfteland, Tina; Softeland, T; Koehler, Christian J; Thiede, Bernd; Wiker, Harald G.
Validating divergent ORF annotation of the Mycobacterium leprae genome through a full translation dataset and peptide identification by tandem mass spectrometry. Proteomics 2009 ;Volume 9.(12) p. 3233-3243
HAUKELAND UiB UiO Untitled
 
32 Koehler, Christian; Strozynski, Margarita Anna; Kozielski, F; Treumann, A; Thiede, Bernd.
Isobaric Peptide Termini Labeling for MS/MS-Based Quantitative Proteomics. Journal of Proteome Research 2009 ;Volume 8.(9) p. 4333-4341
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