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Showing results 1-39 of 39

2019
1 Musilova, Zuzana; Cortesi, Fabio; Matschiner, Michael; Davies, Wayne I. L.; Patel, Jagdish Suresh; Stieb, Sara M.; De Busserolles, Fanny; Malmstrøm, Martin; Tørresen, Ole K.; Brown, Celeste J.; Mountford, Jessica K.; Hanel, Reinhold; Stenkamp, Deborah L.; Jakobsen, Kjetill Sigurd; Carleton, Karen L.; Jentoft, Sissel; Marshall, Justin; Salzburger, Walter.
Vision using multiple distinct rod opsins in deep-sea fishes. Science 2019 ;Volume 364.(6440) p. 588-592
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2018
2 Eide, Marta; Rydbeck, Halfdan; Tørresen, Ole K.; Lille-Langøy, Roger; Puntervoll, Pål; Goldstone, Jared V.; Jakobsen, Kjetill Sigurd; Stegeman, John; Goksøyr, Anders; Karlsen, Odd Andre.
Independent losses of a xenobiotic receptor across teleost evolution. Scientific Reports 2018 ;Volume 8. p. 1-13
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3 Hoff, Siv Nam Khang; Baalsrud, Helle Tessand; Tooming-Klunderud, Ave; Skage, Morten; Richmond, Todd; Obernosterer, Gregor; Shirzadi, Reza; Tørresen, Ole K.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Long‐read sequence capture of the haemoglobin gene clusters across codfish species. Molecular Ecology Resources 2018 ;Volume 19.(1) p. 245-259
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4 Lie, Kai Kristoffer; Tørresen, Ole K.; Solbakken, Monica Hongrø; Rønnestad, Ivar; Tooming-Klunderud, Ave; Nederbragt, Alexander Johan; Jentoft, Sissel; Sæle, Øystein.
Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish. BMC Genomics 2018 ;Volume 19.(186) p. 1-17
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5 Machado, Andrè M.; Tørresen, Ole K.; Kabeya, Naoki; Couto, Alvarina; Petersen, Bent; Felício, Mónica; Campos, Paula F.; Fonseca, Elza; Bandarra, Narcisa; Lopes-Marques, Mónica; Ferraz, Renato; Ruivo, Raquel; Fonseca, Miguel M.; Jentoft, Sissel; Monroig, Óscar; Da Fonseca, Rute R.; Castro, L. Filipe C..
“Out of the Can”: A Draft Genome Assembly, Liver Transcriptome, and Nutrigenomics of the European Sardine, Sardina pilchardus. Genes 2018 ;Volume 9.(10) p. 1-13
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6 Malmstrøm, Martin; Britz, Ralf; Matschiner, Michael; Tørresen, Ole K.; Hadiaty, Renny Kurnia; Yaakob, Norsham; Tan, Heok Hui; Jakobsen, Kjetill Sigurd; Salzburger, Walter; Rüber, Lukas.
The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes. Genome Biology and Evolution 2018 ;Volume 10.(4) p. 1088-1103
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7 Mattingsdal, Morten; Jentoft, Sissel; Tørresen, Ole K.; Knutsen, Halvor; Hansen, Michael Möller; Robalo, Joana I.; Zagrodzka, Zuzanna; Andre, Carl; Blanco Gonzalez, Enrique.
A continuous genome assembly of the corkwing wrasse (Symphodus melops). Genomics 2018 ;Volume 110.(6) p. 399-403
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8 Reinar, William Brynildsen; Tørresen, Ole K.; Matschiner, Michael; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The impact of repetitive DNA on speciation rates in teleost fish. SMBE 2018; 2018-07-08 - 2018-07-12
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9 Tørresen, Ole K..
De novo genome assemblies of Atlantic cod. Red mite genomics workshop; 2018-04-26 - 2018-04-27
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10 Tørresen, Ole K.; Brieuc, Marine Servane; Solbakken, Monica Hongrø; Sørhus, Elin; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Meier, Sonnich; Edvardsen, Rolf; Jentoft, Sissel.
Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats. BMC Genomics 2018 ;Volume 19.(240) p. 1-17
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11 Tørresen, Ole K.; Skrede, Inger; Sandve, Simen Rød; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Borge, Ole Johan.
Gendykk i norsk natur gir ny kunnskap. Genialt 2018 (4) p. 16-18
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12 Varadharajan, Srinidhi; Sandve, Simen Rød; Gillard, Gareth Benjamin; Tørresen, Ole K.; Mulugeta, Teshome Dagne; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Vøllestad, Leif Asbjørn; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The grayling genome reveals selection on gene expression regulation after whole-genome duplication. Genome Biology and Evolution 2018 ;Volume 10.(10) p. 2785-2800
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2017
13 Baalsrud, Helle Tessand; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Salzburger, Walter; Hanel, Reinhold; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
De Novo Gene Evolution of Antifreeze Glycoproteins in Codfishes Revealed by Whole Genome Sequence Data. Molecular biology and evolution 2017 ;Volume 35.(3) p. 593-606
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14 Baalsrud, Helle Tessand; Voje, Kjetil L.; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Matschiner, Michael; Malmstrøm, Martin; Hanel, Reinhold; Salzburger, Walter; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth. Scientific Reports 2017 ;Volume 7. p. 1-10
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15 Elgvin, Tore Oldeide; Trier, Cassandra Nicole; Tørresen, Ole Kristian; Hagen, Ingerid; Lien, Sigbjørn; Nederbragt, Alexander Johan; Ravinet, Mark Simon Paul; Jensen, Henrik; Sætre, Glenn-Peter.
The genomic mosaicism of hybrid speciation. Science Advances 2017 ;Volume 3. p. 1-16
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16 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Whole genome sequencing data and de novo draft assemblies for 66 teleost species. Scientific Data 2017 ;Volume 4. p. 1-13
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17 Tørresen, Ole K..
Long reads: dream or reality?. De novo assembly of teleost fish using PacBio sequencing data; 2017-11-28 - 2017-11-28
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18 Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Reinar, William Brynildsen; Grove, Harald; Miller, Jason R.; Walenz, Brian; Knight, James; Ekholm, Jenny M.; Peluso, Paul; Edvardsen, Rolf; Tooming-Klunderud, Ave; Skage, Morten; Lien, Sigbjørn; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod. BMC Genomics 2017 ;Volume 18. p. 1-23
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2016
19 Eide, Marta; Puntervoll, Pål; Lille-Langøy, Roger; Goldstone, Jared V.; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Rydbeck, Halfdan; Jakobsen, Kjetill Sigurd; Stegeman, John; Goksøyr, Anders; Karlsen, Odd Andre.
Chemical warfare in the marine environment: genomic survey of the Atlantic cod (Gadus morhua) defensome reveals the absence of an important xenosensor. 30th ESCBP Congress: Unraveling complexity: from molecules to ecosystems; 2016-09-04 - 2016-09-07
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20 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav; Hansen, Thomas F; Baalsrud, Helle Tessand; Nederbragt, Alexander Johan; Hanel, Reinhold; Salzburger, Walter; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics 2016 ;Volume 48.(10) p. 1204-1210
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21 Solbakken, Monica Hongrø; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Seppola, Marit; Gregers, Tone Fredsvik; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-like receptor repertoire by gene losses and expansions. Scientific Reports 2016 ;Volume 6.
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22 Star, Bastiaan; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Pampoulie, Christophe; Jentoft, Sissel.
Genomic characterization of the Atlantic cod sex-locus. Scientific Reports 2016 ;Volume 6. p. 1-9
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23 Tørresen, Ole Kristian; Rise, Matthew L.; Jin, Xingkun; Star, Bastiaan; MacKenzie, Simon; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan; Jentoft, Sissel.
An improved version of the Atlantic cod genome and advancements in functional genomics: implications for the future of cod farming. I: Genomics in Aquaculture. Elsevier 2016 ISBN 9780128014189. p. 45-72
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24 Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
The new era of genome sequencing using high-throughput sequencing technology: Generation of the first version of the Atlantic cod genome. I: Genomics in Aquaculture. Elsevier 2016 ISBN 9780128014189. p. 1-20
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2015
25 Baalsrud, Helle Tessand; Tørresen, Ole Kristian; Malmstrøm, Martin; Salzburger, Walter; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
The hemoglobin repertoire in the order of Gadiformes linked to depth adaptation. European Society for Evolutionary Biology (ESEB) 2015; 2015-08-10 - 2015-08-14
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26 Cortesi, Fabio; Musilováa, Zuzana; Stieb, Sara M.; Hart, Nathan S.; Siebeck, Ulrike E.; Malmstrøm, Martin; Tørresen, Ole Kristian; Jentoft, Sissel; Cheney, Karen L.; Marshall, N. Justin; Carleton, Karen L.; Salzburger, Walter.
Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes. Proceedings of the National Academy of Sciences of the United States of America 2015 ;Volume 112.(5) p. 1493-1498
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2014
27 Brynildsen, William; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
Genomic sequence repeats in fish genomes. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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28 Elgvin, Tore Oldeide; Trier, Cassandra Nicole; Tørresen, Ole Kristian; Lien, Sigbjørn; Jensen, Henrik; Sætre, Glenn-Peter.
Sparrows, scaffolds and pseudo-chromosomes. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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29 Matschiner, Michael; Star, Bastiaan; Berg, Paul Ragnar; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Hansen, Marianne Helén Selander; Skage, Morten; Kjesbu, Olav Sigurd; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Population differentiation and local adaptation in Atlantic cod. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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30 Nederbragt, Alexander Johan; Walenz, Brian; Tørresen, Ole Kristian; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Miller, Jason Rafe.
Towards correction-free assembly of raw PacBio reads. Advances in Genome Biology and Technology (AGBT); 2014-02-12 - 2015-02-15
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31 Tørresen, Ole Kristian; Jentoft, Sissel; Star, Bastiaan; Sandve, Geir Kjetil F.; Skage, Morten; Hansen, Marianne Helén Selander; Tooming-Klunderud, Ave; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
A new, high quality reference genome assembly for Atlantic cod. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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32 Tørresen, Ole Kristian; Walenz, Brian; Grove, Harald; Lien, Sigbjørn; Knight, James; Star, Bastiaan; Lagesen, Karin; Sandve, Geir Kjetil F.; Skage, Morten; Hansen, Marianne Helén Selander; Klunderud, Ave Tooming; Miller, Jason Rafe; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
A new, high quality reference genome assembly for Atlantic cod. SocBiN Bioinformatics; 2014-06-11 - 2014-06-13
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2013
33 Solbakken, Monica Hongrø; Malmstrøm, Martin; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Atlantic cod displays an unusual TLR repertoire – a Gadidae-specific feature?. International Congress of Immunology 2013; 2013-08-22 - 2013-08-27
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34 Tørresen, Ole Kristian.
Improving the cod genome assembly: Combining assembly programs and different types of sequencing data. CEES Annual Student Conference; 2013-10-14 - 2013-10-16
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35 Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Miller, Jason Rafe; Walenz, Brian; Jentoft, Sissel; Jakobsen, Kjetill Sigurd.
Improving the Atlantic cod genome using long-read PacBio in combination with 454 and Illumina sequencing data. Genome 10K Conference; 2013-04-25 - 2013-04-28
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2012
36 Nederbragt, Alexander Johan; Tørresen, Ole Kristian; Skage, Morten; Tooming-Klunderud, Ave; Hansen, Marianne Helén Selander; Jentoft, Sissel; Omholt, Stig W; Lien, Sigbjørn; Jakobsen, Kjetill Sigurd.
The long jump: Long distance mate pairs and long PacBio reads for the Salmon Genome Project. 1st International Conference on Integrative Salmonid Biology (ICISB); 2012-06-17 - 2012-06-20
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37 Nederbragt, Alexander Johan; Tørresen, Ole Kristian; Khelik, Ksenia; Lagesen, Karin; Rounge, Trine Ballestad; Star, Bastiaan; Tina, Kirubakaran G.; Berg, Paul Ragnar; Rognes, Torbjørn; Jentoft, Sissel; Winer, Roger; Dewar, Ken; Jakobsen, Kjetill Sigurd.
Challenges and Opportunities for Improving the Atlantic Cod Genome Assembly and Annotation. Plant and Animal Genomes XX; 2012-01-14 - 2012-01-18
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38 Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Lagesen, Karin; Khelik, Ksenia; Rognes, Torbjørn; Jentoft, Sissel; Jakobsen, Kjetill Sigurd.
Improving the cod genome with the use of multi-platform sequencing data. Genome Informatics; 2012-09-06 - 2012-09-09
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2010
39 Minge, Marianne Aastebøl; Shalchian-Tabrizi, Kamran; Tørresen, Ole Kristian; Takishita, Kiyotaka; Probert, Ian; Inagaki, Yuji; Klaveness, Dag; Jakobsen, Kjetill Sigurd.
A phylogenetic mosaic plastid proteome and unusual plastid-targeting signals in the green-colored dinoflagellate Lepidodinium chlorophorum. BMC Evolutionary Biology 2010 ;Volume 10. p. -
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