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2023
1 Dussex, Nicolas; Tørresen, Ole Kristian; van der Valk, Tom; Le Moullec, Mathilde; Veiberg, Vebjørn; Tooming-Klunderud, Ave; Skage, Morten; Garmann-Aarhus, Benedicte; Wood, Jonathan; Rasmussen, Jacob Agerbo; Pedersen, Åshild Ønvik; Martin, Sarah Louise; Røed, Knut; Jakobsen, Kjetill Sigurd; Dalén, Love; Hansen, Brage Bremset; Martin, Michael David.
Adaptation to the High-Arctic island environment despite long-term reduced genetic variation in Svalbard reindeer. iScience 2023 ;Volume 26.(10) p. -
NTNU NINA UiO NPI NMBU Untitled
 
2 Hoff, Siv Nam Khang; Maurstad, Marius Filomeno; Alan, Le Moan; Ravinet, Mark; Durant, Joël; Tørresen, Ole K.; Vieweg, Ireen; Collard, France; Pampoulie, Christophe; Godiksen, Jane Aanestad; Bradbury, Ian R.; Stige, Leif Christian; Renaud, Paul Eric; Nahrgang-Berge, Jasmine Magali; Hop, Haakon; Jakobsen, Kjetill Sigurd; Præbel, Kim; Jentoft, Sissel.
Identification of multiple chromosomal inversions and fusions in a keystone Arctic species with high gene flow. Annual Conference of the Society for Molecular Biology and Evolution; 2023-07-23 - 2023-07-27
UiT UiO HAVFORSK NIVA Untitled
 
3 Hoff, Siv Nam Khang; Maurstad, Marius Filomeno; Le Moan, Alan; Ravinet, Mark; Durant, Joël; Tørresen, Ole Kristian; Vieweg, Ireen; Nahrgang-Berge, Jasmine Magali; Hop, Haakon; Collard, France; Pampoulie, Christophe; Godiksen, Jane Aanestad; Bradbury, Ian; Renaud, Paul Eric; Stige, Leif Christian; Jakobsen, Kjetill Sigurd; Præbel, Kim; Jentoft, Sissel.
Identification of multiple chromosomal inversions and fusions in a keystone Arctic species with high gene flow. Aquatic Sciences Meeting 2023; 2023-06-04 - 2023-06-09
VETINST AKVAPLAN NPI UNIS NIVA HAVFORSK UiO UiT NTNU Untitled
 
4 Kersten, Oliver Sven; Star, Bastiaan; Krabberød, Anders Kristian; Atmore, Lane; Tørresen, Ole K.; Anker-Nilssen, Tycho; Descamps, Sebastien; Strøm, Hallvard; Johansson, Ulf S.; Sweet, Paul R.; Jakobsen, Kjetill Sigurd; Boessenkool, Sanne.
Hybridization of Atlantic puffins in the Arctic coincides with 20th-century climate change. Science Advances 2023 ;Volume 9.(40) p. -
NINA NPI UiO Untitled
 
5 Reinar, William Brynildsen; Greulich, Anne; Stø, Ida Myhrer; Knutsen, Jonfinn Mordekai Blix; Reitan, Trond; Tørresen, Ole K.; Jentoft, Sissel; Butenko, Melinka Alonso; Jakobsen, Kjetill Sigurd.
Adaptive protein evolution through length variation of short tandem repeats in Arabidopsis. Science Advances 2023 ;Volume 9.(12) p. 1-10
UiO Untitled
 
6 Reinar, William Brynildsen; Tørresen, Ole K.; Nederbragt, Lex; Matschiner, Michael; Jentoft, Sissel; Jakobsen, Kjetill Sigurd.
Teleost genomic repeat landscapes in light of diversification rates and ecology. Mobile DNA 2023 ;Volume 14.(1) p. 1-12
UiO Untitled
 
2022
7 Matschiner, Michael; Barth, Julia Maria Isis; Tørresen, Ole K.; Star, Bastiaan; Baalsrud, Helle Tessand; Brieuc, Marine Servane Ono; Pampoulie, Christophe; Bradbury, Ian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Supergene origin and maintenance in Atlantic cod. Nature Ecology and Evolution 2022 ;Volume 6.(4) p. 469-481
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8 Sætre, Camilla Lo Cascio; Rönkä, Katja; Ravinet, Mark; Vitulano, Severino; Caldarella, Matteo; Procházka, Petr; Stokke, Bård Gunnar; Cuevas, Angelica; Bergman, Nora; Thorogood, Rose; Jakobsen, Kjetill Sigurd; Tørresen, Ole K.; Eroukhmanoff, Fabrice.
Genomic consequences of range expansion and colonisation in the reed warbler (Acrocephalus scirpaceus).. bioRxiv 2022
UiO NINA Untitled
 
9 Tørresen, Ole K.; Baalsrud, Helle Tessand; Sandve, Simen Rød; Jakobsen, Kjetill Sigurd.
Bioinfomatic approaches for EBP-Nor. Norwegian Bioinformatics Days 2022; 2022-09-28 - 2022-09-30
NMBU UiO Untitled
 
10 Tørresen, Ole Kristian; Baalsrud, Helle Tessand.
The Norwegian Earth Biogenome Project: the snowy owl genome assembly. NMBU nanopore meeting; 2022-11-10 - 2022-11-10
UiO NMBU Untitled
 
11 Weist, Peggy; Jentoft, Sissel; Tørresen, Ole K.; Schade, Franziska M.; Pampoulie, Christophe; Krumme, Uwe; Hanel, Reinhold.
The role of genomic signatures of directional selection and demographic history in the population structure of a marine teleost with high gene flow. Ecology and Evolution 2022 ;Volume 12.(12) p. -
UiO Untitled
 
2021
12 Sætre, Camilla Lo Cascio; Eroukhmanoff, Fabrice; Rönkä, Katja; Kluen, Edward; Thorogood, Rose; Torrance, James; Tracey, Alan; Chow, William; Pelan, Sarah; Howe, Kerstin; Jakobsen, Kjetill Sigurd; Tørresen, Ole K..
A Chromosome-Level Genome Assembly of the Reed Warbler (Acrocephalus scirpaceus). Genome Biology and Evolution (GBE) 2021 ;Volume 13.(9) p. 1-7
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2020
13 Barth, Julia Maria Isis; Gubili, Chrysoula; Matschiner, Michael; Tørresen, Ole K.; Watanabe, Shun; Egger, Bernd; Han, Yu-San; Feunteun, Eric; Sommaruga, Ruben; Jehle, Robert; Schabetsberger, Robert.
Stable species boundaries despite ten million years of hybridization in tropical eels. Nature Communications 2020 ;Volume 11.
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14 Cayuela, Hugo; Rougemont, Quentin; Laporte, Martin; Mérot, Claire; Normandeau, Eric; Dorant, Yann; Tørresen, Ole K.; Hoff, Siv Nam Khang; Jentoft, Sissel; Pascal, Sirois; Castonguay, Martin; Jansen, Teunis; Præbel, Kim; Clement, Marie; Bernatchez, Louis.
Shared ancestral polymorphism and chromosomal rearrangements as potential drivers of local adaptation in a marine fish. Molecular Ecology 2020 ;Volume 29. p. 2379-2398
UiO UiT Untitled
 
15 Jin, Xingkun; Morro, Bernat; Tørresen, Ole K.; Moiche, Visila; Solbakken, Monica Hongrø; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; MacKenzie, Simon.
Innovation in Nucleotide-Binding Oligomerization-Like Receptor and Toll-Like Receptor Sensing Drives the Major Histocompatibility Complex-II Free Atlantic Cod Immune System. Frontiers in Immunology 2020 ;Volume 11.
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16 Nilsson, Pernille; Solbakken, Monica Hongrø; Schmid, Boris Valentijn; Orr, Russell; Lv, Ruichen; Cui, Yujun; Song, Yajun; Zhang, Yujiang; Baalsrud, Helle Tessand; Tørresen, Ole K.; Stenseth, Nils Christian; Yang, Ruifu; Jakobsen, Kjetill Sigurd; Easterday, William Ryan; Jentoft, Sissel.
The Genome of the Great Gerbil Reveals Species-Specific Duplication of an MHCII Gene. Genome Biology and Evolution (GBE) 2020 ;Volume 12.(2) p. 3832-3849
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17 Roth, Olivia; Solbakken, Monica Hongrø; Tørresen, Ole K.; Bayer, Till; Matschiner, Michael; Baalsrud, Helle Tessand; Hoff, Siv Nam Khang; Brieuc, Marine Servane Ono; Haase, David Jürgen; Hanel, Reinhold; Reusch, Thorsten B. H.; Jentoft, Sissel.
Evolution of male pregnancy associated with remodeling of canonical vertebrate immunity in seahorses and pipefishes. Proceedings of the National Academy of Sciences of the United States of America 2020 ;Volume 117.(17) p. 9431-9439
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2019
18 Musilova, Zuzana; Cortesi, Fabio; Matschiner, Michael; Davies, Wayne I. L.; Patel, Jagdish Suresh; Stieb, Sara M.; De Busserolles, Fanny; Malmstrøm, Martin; Tørresen, Ole K.; Brown, Celeste J.; Mountford, Jessica K.; Hanel, Reinhold; Stenkamp, Deborah L.; Jakobsen, Kjetill Sigurd; Carleton, Karen L.; Jentoft, Sissel; Marshall, Justin; Salzburger, Walter.
Vision using multiple distinct rod opsins in deep-sea fishes. Science 2019 ;Volume 364.(6440) p. 588-592
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19 Tørresen, Ole K.; Star, Bastiaan; Mier, Pablo; Andrade-Navarro, Miguel A.; Bateman, Alex; Jarnot, Patryk; Gruca, Aleksandra; Grynberg, Marcin; Kajava, Andrey V.; Promponas, Vasilis J.; Anisimova, Maria; Jakobsen, Kjetill Sigurd; Linke, Dirk.
Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases. Nucleic Acids Research (NAR) 2019 ;Volume 47.(21) p. 10994-11006
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2018
20 Eide, Marta; Rydbeck, Halfdan; Tørresen, Ole K.; Lille-Langøy, Roger; Puntervoll, Pål; Goldstone, Jared V.; Jakobsen, Kjetill Sigurd; Stegeman, John; Goksøyr, Anders; Karlsen, Odd Andre.
Independent losses of a xenobiotic receptor across teleost evolution. Scientific Reports 2018 ;Volume 8. p. 1-13
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21 Hoff, Siv Nam Khang; Baalsrud, Helle Tessand; Tooming-Klunderud, Ave; Skage, Morten; Richmond, Todd; Obernosterer, Gregor; Shirzadi, Reza; Tørresen, Ole K.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Long‐read sequence capture of the haemoglobin gene clusters across codfish species. Molecular Ecology Resources 2018 ;Volume 19.(1) p. 245-259
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22 Lie, Kai Kristoffer; Tørresen, Ole K.; Solbakken, Monica Hongrø; Rønnestad, Ivar; Tooming-Klunderud, Ave; Nederbragt, Alexander Johan; Jentoft, Sissel; Sæle, Øystein.
Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish. BMC Genomics 2018 ;Volume 19.(186) p. 1-17
HAVFORSK UiO UiB Untitled
 
23 Machado, Andrè M.; Tørresen, Ole K.; Kabeya, Naoki; Couto, Alvarina; Petersen, Bent; Felício, Mónica; Campos, Paula F.; Fonseca, Elza; Bandarra, Narcisa; Lopes-Marques, Mónica; Ferraz, Renato; Ruivo, Raquel; Fonseca, Miguel M.; Jentoft, Sissel; Monroig, Óscar; Da Fonseca, Rute R.; Castro, L. Filipe C..
“Out of the Can”: A Draft Genome Assembly, Liver Transcriptome, and Nutrigenomics of the European Sardine, Sardina pilchardus. Genes 2018 ;Volume 9.(10) p. 1-13
UIA UiO Untitled
 
24 Malmstrøm, Martin; Britz, Ralf; Matschiner, Michael; Tørresen, Ole K.; Hadiaty, Renny Kurnia; Yaakob, Norsham; Tan, Heok Hui; Jakobsen, Kjetill Sigurd; Salzburger, Walter; Rüber, Lukas.
The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes. Genome Biology and Evolution (GBE) 2018 ;Volume 10.(4) p. 1088-1103
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25 Mattingsdal, Morten; Jentoft, Sissel; Tørresen, Ole K.; Knutsen, Halvor; Hansen, Michael Möller; Robalo, Joana I.; Zagrodzka, Zuzanna; Andre, Carl; Blanco Gonzalez, Enrique.
A continuous genome assembly of the corkwing wrasse (Symphodus melops). Genomics 2018 ;Volume 110.(6) p. 399-403
UIA HAVFORSK UiO Untitled
 
26 Reinar, William Brynildsen; Tørresen, Ole K.; Matschiner, Michael; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The impact of repetitive DNA on speciation rates in teleost fish. SMBE 2018; 2018-07-08 - 2018-07-12
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27 Tørresen, Ole K..
De novo genome assemblies of Atlantic cod. Red mite genomics workshop; 2018-04-26 - 2018-04-27
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28 Tørresen, Ole K.; Brieuc, Marine Servane; Solbakken, Monica Hongrø; Sørhus, Elin; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Meier, Sonnich; Edvardsen, Rolf; Jentoft, Sissel.
Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats. BMC Genomics 2018 ;Volume 19.(240) p. 1-17
UiO HAVFORSK Untitled
 
29 Tørresen, Ole K.; Skrede, Inger; Sandve, Simen Rød; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Borge, Ole Johan.
Gendykk i norsk natur gir ny kunnskap. Genialt 2018 (4) p. 16-18
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30 Varadharajan, Srinidhi; Sandve, Simen Rød; Gillard, Gareth Benjamin; Tørresen, Ole K.; Mulugeta, Teshome Dagne; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Vøllestad, Leif Asbjørn; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The grayling genome reveals selection on gene expression regulation after whole-genome duplication. Genome Biology and Evolution (GBE) 2018 ;Volume 10.(10) p. 2785-2800
NMBU UiO Untitled
 
2017
31 Baalsrud, Helle Tessand; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Salzburger, Walter; Hanel, Reinhold; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
De Novo Gene Evolution of Antifreeze Glycoproteins in Codfishes Revealed by Whole Genome Sequence Data. Molecular Biology and Evolution (MBE) 2017 ;Volume 35.(3) p. 593-606
UiO Untitled
 
32 Baalsrud, Helle Tessand; Voje, Kjetil L.; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Matschiner, Michael; Malmstrøm, Martin; Hanel, Reinhold; Salzburger, Walter; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth. Scientific Reports 2017 ;Volume 7. p. 1-10
UIA UiO Untitled
 
33 Elgvin, Tore Oldeide; Trier, Cassandra Nicole; Tørresen, Ole Kristian; Hagen, Ingerid; Lien, Sigbjørn; Nederbragt, Alexander Johan; Ravinet, Mark Simon Paul; Jensen, Henrik; Sætre, Glenn-Peter.
The genomic mosaicism of hybrid speciation. Science Advances 2017 ;Volume 3. p. 1-16
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34 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Whole genome sequencing data and de novo draft assemblies for 66 teleost species. Scientific Data 2017 ;Volume 4. p. 1-13
UIA UiO Untitled
 
35 Tørresen, Ole K..
Long reads: dream or reality?. De novo assembly of teleost fish using PacBio sequencing data; 2017-11-28 - 2017-11-28
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36 Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Reinar, William Brynildsen; Grove, Harald; Miller, Jason R.; Walenz, Brian; Knight, James; Ekholm, Jenny M.; Peluso, Paul; Edvardsen, Rolf; Tooming-Klunderud, Ave; Skage, Morten; Lien, Sigbjørn; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod. BMC Genomics 2017 ;Volume 18. p. 1-23
UIA NMBU UiO HAVFORSK Untitled
 
2016
37 Eide, Marta; Puntervoll, Pål; Lille-Langøy, Roger; Goldstone, Jared V.; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Rydbeck, Halfdan; Jakobsen, Kjetill Sigurd; Stegeman, John; Goksøyr, Anders; Karlsen, Odd Andre.
Chemical warfare in the marine environment: genomic survey of the Atlantic cod (Gadus morhua) defensome reveals the absence of an important xenosensor. 30th ESCBP Congress: Unraveling complexity: from molecules to ecosystems; 2016-09-04 - 2016-09-07
UiB UiO Untitled
 
38 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav; Hansen, Thomas F; Baalsrud, Helle Tessand; Nederbragt, Alexander Johan; Hanel, Reinhold; Salzburger, Walter; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics 2016 ;Volume 48.(10) p. 1204-1210
UiO NMBU UIA HAVFORSK Untitled
 
39 Solbakken, Monica Hongrø; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Seppola, Marit; Gregers, Tone Fredsvik; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-like receptor repertoire by gene losses and expansions. Scientific Reports 2016 ;Volume 6.
UiT UiO UIA Untitled
 
40 Star, Bastiaan; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Pampoulie, Christophe; Jentoft, Sissel.
Genomic characterization of the Atlantic cod sex-locus. Scientific Reports 2016 ;Volume 6. p. 1-9
UIA UiO Untitled
 
41 Tørresen, Ole Kristian; Rise, Matthew L.; Jin, Xingkun; Star, Bastiaan; MacKenzie, Simon; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan; Jentoft, Sissel.
An improved version of the Atlantic cod genome and advancements in functional genomics: implications for the future of cod farming. I: Genomics in Aquaculture. Elsevier 2016 ISBN 9780128014189. p. 45-72
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42 Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
The new era of genome sequencing using high-throughput sequencing technology: Generation of the first version of the Atlantic cod genome. I: Genomics in Aquaculture. Elsevier 2016 ISBN 9780128014189. p. 1-20
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2015
43 Baalsrud, Helle Tessand; Tørresen, Ole Kristian; Malmstrøm, Martin; Salzburger, Walter; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
The hemoglobin repertoire in the order of Gadiformes linked to depth adaptation. European Society for Evolutionary Biology (ESEB) 2015; 2015-08-10 - 2015-08-14
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44 Cortesi, Fabio; Musilováa, Zuzana; Stieb, Sara M.; Hart, Nathan S.; Siebeck, Ulrike E.; Malmstrøm, Martin; Tørresen, Ole Kristian; Jentoft, Sissel; Cheney, Karen L.; Marshall, N. Justin; Carleton, Karen L.; Salzburger, Walter.
Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes. Proceedings of the National Academy of Sciences of the United States of America 2015 ;Volume 112.(5) p. 1493-1498
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2014
45 Brynildsen, William; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
Genomic sequence repeats in fish genomes. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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46 Elgvin, Tore Oldeide; Trier, Cassandra Nicole; Tørresen, Ole Kristian; Lien, Sigbjørn; Jensen, Henrik; Sætre, Glenn-Peter.
Sparrows, scaffolds and pseudo-chromosomes. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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47 Matschiner, Michael; Star, Bastiaan; Berg, Paul Ragnar; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Hansen, Marianne Helén Selander; Skage, Morten; Kjesbu, Olav Sigurd; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Population differentiation and local adaptation in Atlantic cod. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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48 Nederbragt, Alexander Johan; Walenz, Brian; Tørresen, Ole Kristian; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Miller, Jason Rafe.
Towards correction-free assembly of raw PacBio reads. Advances in Genome Biology and Technology (AGBT); 2014-02-12 - 2015-02-15
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49 Tørresen, Ole Kristian; Jentoft, Sissel; Star, Bastiaan; Sandve, Geir Kjetil F.; Skage, Morten; Hansen, Marianne Helén Selander; Tooming-Klunderud, Ave; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
A new, high quality reference genome assembly for Atlantic cod. CEES Annual Student Conference; 2014-10-21 - 2014-10-22
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50 Tørresen, Ole Kristian; Walenz, Brian; Grove, Harald; Lien, Sigbjørn; Knight, James; Star, Bastiaan; Lagesen, Karin; Sandve, Geir Kjetil F.; Skage, Morten; Hansen, Marianne Helén Selander; Klunderud, Ave Tooming; Miller, Jason Rafe; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
A new, high quality reference genome assembly for Atlantic cod. SocBiN Bioinformatics; 2014-06-11 - 2014-06-13
UiO NMBU Untitled
 
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