Current Research Information SysTem In Norway

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Etternavn: Snipen   Fornavn: Lars-Gustav   Alle publ. kanaler

Viser treff 1-50 av 125 << Forrige 1 2 3    Neste >>

1 Dørum, Guro; Ingold, Sabrina; Hanson, Erin; Ballantyne, Jack; Russo, Giancarlo; Aluri, Sirisha; Snipen, Lars-Gustav; Haas, Cordula.
Predicting the origin of stains from whole miRNome massively parallel sequencing data. Forensic Science International: Genetics 2019 ;Volum 40. s. 131-139
NMBU Untitled
2 Jin, Yang; Angell, Inga Leena; Sandve, Simen Rød; Snipen, Lars-Gustav; Olsen, Yngvar; Rudi, Knut.
Atlantic salmon raised with diets low in long-chain polyunsaturated n-3 fatty acids in freshwater have a Mycoplasma-dominated gut microbiota at sea. Aquaculture Environment Interactions 2019 ;Volum 11. s. 31-39
NTNU NMBU Untitled
3 Liu, Binbin; Zhang, Xiaojun; Bakken, Lars; Snipen, Lars-Gustav; Frostegård, Åsa.
Rapid succession of actively transcribing denitrifier populations in agricultural soil during an anoxic spell. Frontiers in Microbiology 2019 ;Volum 9.
NMBU Untitled
4 Dørum, Guro; Ingold, Sabrina; Hanson, Erin; Ballantyne, Jack; Snipen, Lars-Gustav; Haas, Cordula.
Predicting the origin of stains from next generation sequencing mRNA data. Forensic Science International: Genetics 2018 ;Volum 34. s. 37-48
NMBU Untitled
5 Hanssen, Eirik Natås; Liland, Kristian Hovde; Gill, Peter; Snipen, Lars-Gustav.
Optimizing body fluid recognition from microbial taxonomic profiles. Forensic Science International: Genetics 2018 ;Volum 37. s. 13-20
OUS UiO NMBU Untitled
6 Ravi, Anuradha; Avershina, Ekaterina; Angell, Inga Leena; Ludvigsen, Jane; Manohar, Prasanth; Padmanaban, Sumathi; Nachimuthu, Ramesh; Snipen, Lars-Gustav; Rudi, Knut.
Comparison of reduced metagenome and 16S rRNA gene sequencing for determination of genetic diversity and mother-child overlap of the gut associated microbiota. Journal of Microbiological Methods 2018 ;Volum 149. s. 44-52
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7 Rudi, Knut; Angell, Inga Leena; Pope, Phillip; Vik, Jon Olav; Sandve, Simen Rød; Snipen, Lars-Gustav.
A stable core gut microbiota across fresh- to saltwater transition for farmed Atlantic salmon. Applied and Environmental Microbiology 2018 ;Volum 84.(2)
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8 Bohlin, Jon; Eldholm, Vegard; Pettersson, John; Brynildsrud, Ola Brønstad; Snipen, Lars-Gustav.
The nucleotide composition of microbial genomes indicates differential patterns of selection on core and accessory genomes. BMC Genomics 2017 ;Volum 18. s. -
FHI NMBU Untitled
9 Bråten, Line Skute; Sødring, Marianne Sundt; Paulsen, Jan Erik; Snipen, Lars-Gustav; Rudi, Knut.
Cecal microbiota association with tumor load in a colorectal cancer mouse model. Microbial Ecology in Health and Disease 2017 ;Volum 28.(1)
NMBU Untitled
10 Hanssen, Eirik Natås; Avershina, Ekaterina; Rudi, Knut; Gill, Peter; Snipen, Lars-Gustav.
Body Fluid Prediction from Microbial Patterns for Forensic Application. Forensic Science International: Genetics 2017 ;Volum 30. s. 10-17
OUS UiO NMBU Untitled
11 Liland, Kristian Hovde; Vinje, Hilde; Snipen, Lars-Gustav.
microclass: An R-package for 16S taxonomy classification. BMC Bioinformatics 2017 ;Volum 18.(172) s. -
12 McLeod, Anette; Mosleth, Ellen Færgestad; Rud, Ida; Branco dos Santos, Filipe; Snipen, Lars-Gustav; Liland, Kristian Hovde; Axelsson, Lars.
Effects of glucose availability in Lactobacillus sakei; metabolic change and regulation of the proteome and transcriptome. PLOS ONE 2017 ;Volum 12:e0187542.(11) s. 1-20
13 Liland, Kristian Hovde; Snipen, Lars-Gustav.
fixedTimeEvents: An R package for the distribution of distances between discrete events in fixed time. SoftwareX 2016 ;Volum 5. s. 227-233
14 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav; Hansen, Thomas F; Baalsrud, Helle Tessand; Nederbragt, Alexander Johan; Hanel, Reinhold; Salzburger, Walter; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics 2016 ;Volum 48.(10) s. 1204-1210
15 Brynildsrud, Ola Brønstad; Snipen, Lars-Gustav; Bohlin, Jon.
CNOGpro: detection and quantification of CNVs in prokaryotic whole-genome sequencing data. Bioinformatics 2015 ;Volum 31.(11) s. 1708-1715
FHI NMBU Untitled
16 Leanti La Rosa, Sabina; Snipen, Lars-Gustav; Murray, Barbara E.; Willems, Rob J.L.; Gilmore, Michael S.; Diep, Dzung Bao; Nes, Ingolf; Brede, Dag Anders.
A genomic virulence reference map of Enterococcus faecalis reveals an important contribution of phage03-like elements in nosocomial genetic lineages to pathogenicity in a Caenorhabditis elegans infection model. Infection and Immunity 2015 ;Volum 83.(5) s. 2156-2167
NMBU Untitled
17 Mehmood, Tahir; Bohlin, Jon; Snipen, Lars.
A partial least squares based procedure for upstream sequence classification in prokaryotes. IEEE/ACM Transactions on Computational Biology & Bioinformatics 2015 ;Volum 12.(3) s. 560-567
NMBU Untitled
18 Snipen, Lars-Gustav; Liland, Kristian Hovde.
micropan: An R-package for microbial pan-genomics. BMC Bioinformatics 2015 ;Volum 16.(1) s. 1-8
19 Vinje, Hilde; Liland, Kristian Hovde; Almøy, Trygve; Snipen, Lars-Gustav.
Comparing K-mer based methods for improved classification of 16S sequences. BMC Bioinformatics 2015 ;Volum 16:205.
20 Askarian, Fatemeh; Sangvik, Maria; Hanssen, Anne-Merethe; Snipen, Lars; Sollid, Johanna U. Ericson; Johannessen, Mona.
Staphylococcus aureus nasal isolates from healthy individuals cause highly variable host cell responses in vitro: The Tromsø Staph and Skin Study. Pathogens and Disease 2014 ;Volum 70.(2) s. 158-166
UiT NMBU Untitled
21 Bohlin, Jon; Brynildsrud, Ola Brønstad; Sekse, Camilla; Snipen, Lars.
An evolutionary analysis of genome expansion and pathogenicity in Escherichia coli. BMC Genomics 2014 ;Volum 15. s. -
22 Dørum, Guro; Bleka, Øyvind; Gill, Peter; Haned, Hinda; Snipen, Lars; Sæbø, Solve; Egeland, Thore.
Exact computation of the distribution of likelihood ratios with forensic applications. Forensic Science International: Genetics 2014 ;Volum 9.(1) s. 93-101
FHI UiO NMBU Untitled
23 Dørum, Guro; Snipen, Lars; Solheim, Margrete; Sæbø, Solve.
Rotation gene set testing for longitudinal expression data. Biometrical Journal 2014 ;Volum 56.(6) s. 1055-1075
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24 McLeod, Anette; Mosleth, Ellen Færgestad; Snipen, Lars; dos Santos, Filipe Braco; Lysenko, Artem; Rud, Ida; Axelsson, Lars.
The effect of growth rate in Lactobacillus sakei; analysis of experimental data in light of external information. 11th International Symposium on Lactic Acid Bacteria; 2014-08-31 - 2014-09-04
25 Solheim, Margrete; Leanti La Rosa, Sabina; Mathiesen, Thomas; Snipen, Lars; Nes, Ingolf; Brede, Dag Anders.
Functional Analysis of NaCl-Induced Stress in Enterococcus faecalis. PLOS ONE 2014 ;Volum 9.(4)
NMBU Untitled
26 Vinje, Hilde; Almøy, Trygve; Liland, Kristian Hovde; Snipen, Lars.
A systematic search for discriminating sites in the 16S ribosomal RNA gene. Microbial Informatics and Experimentation 2014 ;Volum 4.(2) s. -
27 Mehmood, Tahir; Snipen, Lars.
Clustered Variable Selection by Regularized Elimination in PLS. I: New Perspectives in Partial Least Squares and Related Methods. Springer 2013 ISBN 978-1-4614-8283-3. s. 95-105
NMBU Untitled
28 Mehmood, Tahir; Snipen, Lars.
Clustered variable selection by regularized elimination in PLS. PLS2012 Conference proceeding, Houston, Texas, USA; 2012-05-19 - 2012-05-22
NMBU Untitled
29 Bohlin, Jon; van Passel, Mark W.J.; Snipen, Lars; Kristoffersen, Anja Bråthen; Ussery, David W.; Hardy, Simon P..
Relative entropy differences in bacterial chromosomes, plasmids, phages and genomic islands. BMC Genomics 2012 ;Volum 13.
30 Mehmeti, Ibrahim; Færgestad, Ellen Mosleth; Bekker, Martijn; Snipen, Lars; Nes, Ingolf; Holo, Helge.
Growth Rate-Dependent Control in Enterococcus faecalis: Effects on the Transcriptome and Proteome, and Strong Regulation of Lactate Dehydrogenase. Applied and Environmental Microbiology 2012 ;Volum 78.(1) s. 170-176
31 Mehmood, Tahir; Bohlin, Jon; Kristoffersen, Anja Bråthen; Sæbø, Solve; Warringer, Jonas; Snipen, Lars.
Exploration of multivariate analysis in microbial coding sequence modeling. BMC Bioinformatics 2012 ;Volum 13.
32 Mehmood, Tahir; Liland, Kristian Hovde; Snipen, Lars; Sæbø, Solve.
A review of variable selction methods in Partial Least Squares Regression. Chemometrics and Intelligent Laboratory Systems 2012 ;Volum 118. s. 62-69
NMBU Untitled
33 Mehmood, Tahir; Snipen, Lars.
Variable selection in PLS in presence of correlated variables. ims-APRM, 2012; 2012-07-02 - 2012-07-04
UiO NMBU Untitled
34 Mehmood, Tahir; Warringer, Jonas; Snipen, Lars; Sæbø, Solve.
Improving stability and understandability of genotype-phenotype mapping in Saccharomyces using regularized variable selection in L-PLS regression. BMC Bioinformatics 2012 ;Volum 13.(327) s. -
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35 Snipen, Lars; Ussery, David W..
A domain sequence approach to pangenomics: Applications to Escherichia coli [v1; ref status: indexed,]. F1000 2012 ;Volum 1.(19) s. -
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36 Snipen, Lars; Wassenaar, Trudy M.; Altermann, Eric; Olson, Jonathan; Kathariou, Sophia; Lagesen, Karin; Takamiya, Monica; Knøchel, Susanne; Ussery, David Wayne; Meinersmann, Richard J..
Analysis of evolutionary patterns of genes in Campylobacter jejuni and C. coli. Microbial Informatics and Experimentation 2012 ;Volum 2.(1) s. -
OUS UiO NMBU Untitled
37 Tessema, Girum Tadesse; Møretrø, Trond; Snipen, Lars; Heir, Even; Holck, Askild lorentz; Naterstad, Kristine; Axelsson, Lars.
Microarray-based transcriptome of Listeria monocytogenes adapted to sublethal concentrations of acetic acid, lactic acid, and hydrochloric acid. Canadian Journal of Microbiology (print) 2012 ;Volum 58.(9) s. 1112-1123
38 Brede, Dag Anders; Snipen, Lars-Gustav; Ussery, David Wayne; Nederbragt, Alexander Johan; Nes, Ingolf.
Complete Genome Sequence of the Commensal Enterococcus faecalis 62, Isolated from a Healthy Norwegian Infant. Journal of Bacteriology 2011 ;Volum 193.(9) s. 2377-2378
UiO NMBU Untitled
39 Dørum, Guro; Snipen, Lars-Gustav; Solheim, Margrete; Sæbø, Solve.
Gene set analysis with rotation test for longitudinal expression data. The 16th Norwegian Statistical Conference; 2011-06-14 - 2011-06-17
NMBU Untitled
40 Dørum, Guro; Snipen, Lars-Gustav; Solheim, Margrete; Sæbø, Solve.
Rotation gene set testing for longitudinal expression data. Bioinformatics Forum for Young Scientists 2011; 2011-03-16 - 2011-03-18
NMBU Untitled
41 Dørum, Guro; Snipen, Lars-Gustav; Solheim, Margrete; Sæbø, Solve.
Smoothing Gene Expression Data with Network Information Improves Consistency of Regulated Genes. Statistical Applications in Genetics and Molecular Biology 2011 ;Volum 10.(1) s. -
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42 Kjos, Morten; Borrero, Juan; Opsata, Mona; Birri, Dagim Jirata; Holo, Helge; Cintas, Luis M.; Snipen, Lars-Gustav; Hernández, P.E.; Nes, Ingolf; Diep, Dzung Bao.
Target recognition, resistance, immunity and genome mining of class II bacteriocins from Gram-positive bacteria. Microbiology 2011 ;Volum 157.(12) s. 3256-3267
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43 Liland, Kristian Hovde; Sæbø, Solve; Egeland, Thore; Sandberg, Ellen; Snipen, Lars-Gustav; Almøy, Trygve.
Teaching applied statistics to students in natural sciencesusing the R Commander. useR! 2011; 2011-08-15 - 2011-08-18
FHI NMBU Untitled
44 McLeod, Anette; Snipen, Lars-Gustav; Naterstad, Kristine; Axelsson, Lars.
Global transcriptome response in Lactobacillus sakei during growth on ribose. BMC Microbiology 2011 ;Volum 11. s. -
45 Mehmood, Tahir; Martens, Harald; Sæbø, Solve; Warringer, Jonas; Snipen, Lars-Gustav.
A Partial Least Squares based algorithm for parsimonious variable selection. Algorithms for Molecular Biology 2011 ;Volum 6. s. -
NMBU Untitled
46 Mehmood, Tahir; Martens, Harald; Sæbø, Solve; Warringer, Jonas; Snipen, Lars-Gustav.
Feature Construction from Sequence Data for Revealing Genotype-Phenotype Relations. Bioinformatics for Young Scientists (BFYS) 2011; 2011-03-16 - 2011-03-18
NMBU Untitled
47 Mehmood, Tahir; Martens, Harald; Sæbø, Solve; Warringer, Jonas; Snipen, Lars-Gustav.
Mining for genotype-phenotype relations in Saccharomyces using partial least squares. BMC Bioinformatics 2011 ;Volum 12. s. -
NMBU Untitled
48 Mehmood, Tahir; Warringer, Jonas; Sæbø, Solve; Snipen, Lars-Gustav.
Two Stage Variable Elimination in L-PLS Regression Where Background Information on Independent Variable is Available. Conferentia Chemometrica 2011; 2011-09-18 - 2011-09-21
NMBU Untitled
49 Nyquist, Otto Ludvig; McLeod, Anette; Brede, Dag Anders; Snipen, Lars-Gustav; Aakra, Ågot; Nes, Ingolf.
Comparative genomics of Lactobacillus sakei with emphasis on strains from meat. Molecular Genetics and Genomics 2011 ;Volum 285.(4) s. 297-311
50 Solheim, Margrete; Brekke, Mari Christine; Snipen, Lars-Gustav; Willems, Rob J.L.; Nes, Ingolf; Brede, Dag Anders.
Comparative genomic analysis reveals significant enrichment of mobile genetic elements and genes encoding surface structure-proteins in hospital-associated clonal complex 2 Enterococcus faecalis. BMC Microbiology 2011 ;Volum 11.(3) s. -
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