Cristin

2018
1.	Felten, Judith; Vahala, Jorma; Love, Jonathan; Gorzsás, András; Rüggeberg, Markus; Delhomme, Nicolas; Leśniewska, Joanna; Kangasjarvi, Jaakko; Hvidsten, Torgeir Rhoden; Mellerowicz, Ewa; Sundberg, Björn. Ethylene signaling induces gelatinous layers with typical features of tension wood in hybrid aspen. New Phytologist 2018 ;Volum 218.(3) s. 999-1014 NMBU Untitled

2.	Gillard, Gareth Benjamin; Harvey, Thomas Nelson; Gjuvsland, Arne Bjørke; Jin, Yang; Thomassen, Magny Sissel S.; Lien, Sigbjørn; Leaver, Michael; Torgersen, Jacob Seilø; Hvidsten, Torgeir Rhoden; Vik, Jon Olav; Sandve, Simen Rød. Life-stage associated remodeling of lipid metabolism regulation in Atlantic salmon. Molecular Ecology 2018 ;Volum 27.(5) s. 1200-1213 NTNU NMBU Untitled

3.	Kunath, Benoit Josef; Delogu, Francesco; Naas, Adrian Ertsås; Arntzen, Magnus Øverlie; Eijsink, Vincent; Henrissat, Bernard; Hvidsten, Torgeir Rhoden; Pope, Phillip. From proteins to polysaccharides: lifestyle and genetic evolution of Coprothermobacter proteolyticus. The ISME Journal 2018 NMBU Untitled

4.	Kunath, Benoit Josef; Delogu, Francesco; Naas, Adrian Ertsås; Arntzen, Magnus Øverlie; Eijsink, Vincent; Hvidsten, Torgeir Rhoden; Pope, Phillip. From proteins to polysaccharides; adaptations of heterogeneous strains and interactions for biomass co-degradation. 17th International Symposium on Microbial Ecology (ISME17); 2018-08-12 - 2018-08-17 NMBU Untitled

5.	Obudulu, Ogonna; Mähler, Niklas; Skotare, Tomas; Bygdell, Joakim; Abreu, Ilka N.; Ahnlund, Maria; Gandla, Madhavi Latha; Petterle, Anna; Moritz, Thomas; Hvidsten, Torgeir Rhoden; Jönsson, Leif J.; Wingsle, Gunnar; Trygg, Johan; Tuominen, Hannele. A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees. BMC Genomics 2018 ;Volum 19.(11) NMBU Untitled

6.	Sandve, Simen Rød; Rohlfs, Rori V; Hvidsten, Torgeir Rhoden. Subfunctionalization versus neofunctionalization after whole-genome duplication. Nature Genetics 2018 ;Volum 50. s. 908-909 NMBU Untitled

7.	Tylewicz, S.; Petterle, Anna; Marttila, S; Miskolczi, P; Azeez, A; Singh, R. K.; Immanen, Juha; Mähler, Niklas; Hvidsten, Torgeir Rhoden; Eklund, D. M.; Bowman, J. L.; Helariutta, Y.; Bhalerao, Rishikesh. Photoperiodic control of seasonal growth is mediated by ABA acting on cell-cell communication. Science 2018 ;Volum 360.(6385) s. 212-215 NMBU Untitled
2017
8.	Demko, Viktor; Belova, Tatiana; Hvidsten, Torgeir Rhoden; Perroud, Pierre-Francois; Johansen, Wenche; Olsen, Odd-Arne. Using transcriptomics to link Calpain-controlled development to gene expression networks.. th Norwegian Plant Biology Conference, June 21-22 2017; 2017-06-21 - 2017-06-22 HINN NMBU Untitled

9.	Harvey, Thomas N; Torgersen, Jacob Seilø; Vik, Jon Olav; Hvidsten, Torgeir Rhoden; Gillard, Gareth Benjamin; Sandve, Simen Rød. Precision cut liver slice culture as a platform for studying lipid metabolism in Atlantic salmon. Norwegian Biochemical Society (NBS) annual meeting; 2017-01-19 - 2017-01-22 UiO NMBU Untitled

10.	Hvidsten, Torgeir Rhoden. Gene co-expression network connectivity is an important determinant of selective constraint. Evolution, June 23-27; 2017-07-23 - 2017-07-27 NMBU Untitled

11.	Hvidsten, Torgeir Rhoden. Regulatory evolution after whole genome duplication. Third annual conference of NORBIS; 2017-11-08 - 2017-11-10 NMBU Untitled

12.	Hvidsten, Torgeir Rhoden. The transcriptome of wood formation. 50 Years Plant Science in Umeå Symposium; 2017-08-21 - 2017-08-23 NMBU Untitled

13.	Jokipii-Lukkari, Sile; Sundell, David; Nilsson, Ove; Hvidsten, Torgeir Rhoden; Street, Nathaniel R.; Tuominen, Hannele. NorWood: A gene expression resource for evo-devo studies of conifer wood development. New Phytologist 2017 ;Volum 216.(2) s. 482-494 NMBU Untitled

14.	Mähler, Niklas; Wang, Jing; Terebieniec, B; Ingvarsson, Pär K.; Street, Nathaniel R.; Hvidsten, Torgeir Rhoden. Gene co-expression network connectivity is an important determinant of selective constraint. PLoS Genetics 2017 ;Volum 13.(4) NMBU Untitled

15.	Robertson, Fiona M; Gundappa, Manu Kumar; Grammes, Fabian; Hvidsten, Torgeir Rhoden; Redmond, Anthony K; Lien, Sigbjørn; Martin, Samuel AM; Holland, Peter WH; Sandve, Simen Rød; Macqueen, Daniel J. Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification. Genome Biology 2017 ;Volum 18. s. - NMBU Untitled

16.	Sandve, Simen Rød; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Rori, Rohlfs; Jakobsen, Kjetill Sigurd; Nome, Torfinn; Varadharajan, Srinidhi; Nederbragt, Alexander Johan; Vøllestad, Leif Asbjørn. Evolution after whole genome duplication - insights from the salmonids. Evolution Conference; 2017-06-22 UiO NMBU Untitled

17.	Sandve, Simen Rød; Nicola, Barson; Hvidsten, Torgeir Rhoden. Hvorfor har vi sex?. Aftenposten Viten 2017 NMBU Untitled

18.	Schubert, Marian; Grønvold, Lars; Sandve, Simen Rød; Hvidsten, Torgeir Rhoden; Fjellheim, Siri. Molecular evolution of cold response in temperate grasses (Pooideae). Evolution 2017; 2017-07-23 - 2017-07-27 NMBU Untitled

19.	Sundell, David; Street, Nathaniel R.; Kumar, Manoj; Mellerowicz, Ewa; Kucukoglu, Melis; Johnsson, Christoffer; Kumar, Vikash; Mannapperuma, Chanaka; Delhomme, Nicolas; Nilsson, Ove; Tuominen, Hannele; Pesquet, Edouard; Fischer, Urs; Niittylä, Totte; Sundberg, Björn; Hvidsten, Torgeir Rhoden. AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula. The Plant Cell 2017 ;Volum 29.(7) s. 1585-1604 NMBU Untitled
2016
20.	Gillard, Gareth; Harvey, Thomas N; Vik, Jon Olav; Gjuvsland, Arne Bjørke; Lien, Sigbjørn; Hvidsten, Torgeir Rhoden; Sandve, Simen Rød. Metabolic responses in Atlantic salmon omega-3 pathways after dietary switches between fish and vegetable oils. International Conference on Integrative Salmonid Biology (ICISB) 2016; 2016-04-24 - 2016-04-27 NMBU Untitled

21.	Gillard, Gareth; Sandve, Simen Rød; Hvidsten, Torgeir Rhoden. Salmonid gene expression evolution after whole genome duplication. Bay Area Population Genomics Meeting XIV; 2016-09-17 - 2016-09-17 NMBU Untitled

22.	Hermansen, Russell A.; Hvidsten, Torgeir Rhoden; Sandve, Simen Rød; Liberles, David A.. Extracting functional trends from whole genome duplication events using comparative genomics. Biological Procedures Online 2016 ;Volum 18:11. s. - NMBU Untitled

23.	Hvidsten, Torgeir Rhoden. Computational methods for studying the evolution of gene regulation. PhD/Post Doc workshop at Klækken; 2016-09-09 - 2016-09-10 NMBU Untitled

24.	; Hånes, Katrine. Optimizing Transcriptome Analysis using Short-Read RNA-Seq in Atlantic Salmon. Ås: Norges miljø- og biovitenskapelige universitet 2016 29 s. NOFIMA NMBU Untitled

25.	Ingvarsson, Pär K.; Hvidsten, Torgeir Rhoden; Street, Nathaniel R.. Towards integration of population and comparative genomics in forest trees. New Phytologist 2016 ;Volum 212.(2) s. 338-344 NMBU Untitled

26.	Lien, Sigbjørn; Koop, Ben F; Sandve, Simen Rød; Miller, Jason R.; Kent, Matthew Peter; Nome, Torfinn; Hvidsten, Torgeir Rhoden; Leong, Jong; Minkley, David R.; Zimin, Aleksey; Grammes, Fabian; Grove, Harald; Gjuvsland, Arne Bjørke; Walenz, Brian; Hermansen, Russell A.; von Schalburg, Kristian R.; Rondeau, Eric; Genova, Alex Di; Antony Samy, Jeevan Karloss; Vik, Jon Olav; Vigeland, Magnus Dehli; Caler, Lis; Grimholt, Unni; Jentoft, Sissel; Våge, Dag Inge; de Jong, Pieter J.; Moen, Thomas; Baranski, Matthew; Palti, Yniv; Smith, Douglas W.; Yorke, James A.; Nederbragt, Alexander J.; Tooming-Klunderud, Ave; Jakobsen, Kjetill Sigurd; Jiang, Xuanting; Fan, Dingding; Hu, Yan; Liberles, David A.; Vidal, Rodrigo; Iturra, Patricia; Jones, Steven J.M.; Jonassen, Inge; Maass, Alejandro; Omholt, Stig William; Davidson, William S. The Atlantic salmon genome provides insights into rediploidization. Nature 2016 ;Volum 533.(7602) s. 200-205 NOFIMA NTNU OUS UiB UiO VETINST NMBU Untitled

27.	Obudulu, Ogonna; Bygdell, Joakim; Sundberg, Björn; Moritz, Thomas; Hvidsten, Torgeir Rhoden; Trygg, Johan; Wingsle, Gunnar. Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development. BMC Genomics 2016 ;Volum 17.(119) NMBU Untitled

28.	Schubert, Marian. Evolution of adaptations to temperate climate in the grass subfamily Pooideae. Ås: Norwegian University of Life Sciences 2016 (ISBN 978-82-575-1403-7) 170 s. NMBU Untitled

29.	Sverdrup-Thygeson, Anne; Sandve, Simen Rød; Hvidsten, Torgeir Rhoden. Verdens rareste dyr ble nettopp litt rarere. Aftenposten Viten 2016 NMBU Untitled
2015
30.	Delhomme, Nicolas; Mähler, Niklas; Schiffthaler, Bastian; Sundell, David; Mannapperuma, Chanaka; Hvidsten, Torgeir Rhoden; Street, Nathaniel. EpiGeneSys Protocol. NMBU Untitled

31.	Delhomme, Nicolas; Sundström, Görel; Zamani, Neda; Lantz, Henrik; Lin, Yao-Cheng; Hvidsten, Torgeir Rhoden; Höppner, Marc P.; Jern, Patric; Van de Peer, Yves; Lundeberg, Joakim; Grabherr, Manfred G.; Street, Nathaniel. Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies). PLoS ONE 2015 ;Volum 10:e0139080.(9) NMBU Untitled

32.	Hvidsten, Torgeir Rhoden. Comparative regulomics: computational approaches to reveal the evolution of transcriptional regulation.. Next Generation Sequencing Symposium; 2015-12-10 - 2015-12-11 NMBU Untitled

33.	Hvidsten, Torgeir Rhoden. Seeing the forest for the trees in omics data; examples from aspen and spruce genomics projects. Norwegian Biochemical Society seminar series; 2015-04-09 NMBU Untitled

34.	Mähler, Niklas; Robinson, Kathryn M; Street, Nathaniel; Hvidsten, Torgeir Rhoden. The regulatory landscape of Populus tremula. RegGenSIG at ISMB; 2015-07-10 - 2015-07-14 NMBU Untitled

35.	Sandve, Simen Rød; Hvidsten, Torgeir Rhoden. Hva er likheten mellom en rosinbolle og en laksefilet?. Aftenposten (morgenutg. : trykt utg.) 2015 NMBU Untitled

36.	Sandve, Simen Rød; Hvidsten, Torgeir Rhoden. Om å overleve i en fryser. Aftenposten (morgenutg. : trykt utg.) 2015 NMBU Untitled

37.	Sundell, David; Mannapperuma, Chanaka; Netotea, Sergiu; Delhomme, Nicolas; Lin, Yao-Cheng; Sjödin, Andreas; Van de Peer, Yves; Jansson, Stefan; Hvidsten, Torgeir Rhoden; Street, Nathaniel. The plant genome integrative explorer resource: PlantGenIE.org. New Phytologist 2015 ;Volum 208.(4) s. 1149-1156 NMBU Untitled

38.	Terebieniec, B; Schiffthaler, Bastian; Robinson, Kathryn M; Mähler, Niklas; Delhomme, Nicolas; Hvidsten, Torgeir Rhoden; Street, Nathaniel. Leaf Development Characterisation in European Aspen (Populus tremula). IUFRO Tree Biotechnology Conference. June 8-12, 2015, Florence, Italy; 2015-06-08 - 2015-06-12 NMBU Untitled

39.	Zaborowski, R; Hvidsten, Torgeir Rhoden; Wilczynski, Bartek. Genes co-localization in topologically associating domains indicates higher co-expression. Recomb; 2015-04-12 - 2015-04-15 NMBU Untitled
2014
40.	Delhomme, Nicolas; Mannapperuma, Chanaka; Sundell, David; Mähler, Niklas; Schiffthaler, Bastian; Lin, Yao-Cheng; Felten, Judith; Grabherr, Manfred G.; Van de Peer, Yves; Jansson, Stefan; Sundberg, Björn; Hvidsten, Torgeir Rhoden; Street, Nathaniel. A Cautionary Tale of Using RNAseq Data: Examples from Large-Scale Projects at the Umeå Plant Science Centre. Plant & Animal Genome XXII Conference; 2014-01-11 - 2014-01-15 NMBU Untitled

41.	Hvidsten, Torgeir Rhoden. Comparative Analysis of Gene Regulatory Networks in Plants. Swedish University of Agricultural Sciences; 2014-03-28 - 2014-03-28 NMBU Untitled

42.	Mähler, Niklas; Cheregi, Otilia; Funk, Christiane; Netotea, Sergiu; Hvidsten, Torgeir Rhoden. Synergy: A web resource for exploring gene regulation in Synechocystis sp. PCC6803. PLoS ONE 2014 ;Volum 9.(11) NMBU Untitled

43.	Mähler, Niklas; Netotea, Sergiu; Hvidsten, Torgeir Rhoden. Synergy: A Web Resource for Exploring Gene Expression in Synechocystis sp. PCC6803. Plant & Animal Genome XXII Conference; 2014-01-11 - 2014-01-15 NMBU Untitled

44.	Netotea, Sergiu; Sundell, David; Mähler, Niklas; Delhomme, Nicolas; Street, Nathaniel; Hvidsten, Torgeir Rhoden. Comparative Analysis of Gene Regulatory Networks in Plants. Plant & Animal Genome XXII Conference; 2014-01-11 - 2014-01-15 NMBU Untitled

45.	Netotea, Sergiu; Sundell, David; Street, Nathaniel; Hvidsten, Torgeir Rhoden. ComPlEx: conservation and divergence of co-expression networks in A. thaliana, Populus and O. sativa. BMC Genomics 2014 ;Volum 15. s. - NMBU Untitled

46.	Pfeifer, Matthias; Kugler, Karl G.; Sandve, Simen Rød; Zhan, Bujie; Rudi, Heidi; Hvidsten, Torgeir Rhoden; Paux, Etienne; Mayer, Klaus; Olsen, Odd-Arne. The Transcriptional Landscape of Bread Wheat. Plant & Animal Genome XXII Conference; 2014-01-11 - 2014-01-15 NMBU Untitled

47.	Pfeifer, Matthias; Kugler, Karl G; Sandve, Simen Rød; Zhan, Bujie; Rudi, Heidi; Hvidsten, Torgeir Rhoden; Mayer, Klaus F X; Olsen, Odd-Arne. Genome interplay in the grain transcriptome of hexaploid bread wheat. Science 2014 ;Volum 345.(6194) NMBU Untitled

48.	Robinson, Kathryn M; Delhomme, Nicolas; Mähler, Niklas; Schiffthaler, Bastian; Önskog, Jenny; Albrectsen, Benedicte Rieber; Ingvarsson, Pär K.; Hvidsten, Torgeir Rhoden; Jansson, Stefan; Street, Nathaniel R.. Populus tremula (European aspen) shows no evidence of sexual dimorphism. BMC Plant Biology 2014 ;Volum 14:276. NMBU Untitled

49.	Sandve, Simen Rød; Hvidsten, Torgeir Rhoden. Bjørgen-koden. Aftenposten Viten 2014 NMBU Untitled

50.	Schubert, Marian; Grønvold, Lars; Sandve, Simen Rød; Hvidsten, Torgeir Rhoden; Fjellheim, Siri. Evolution of vernalization in the grass subfamily Pooideae – an integrated approach. Plant Genomics Congress; 2014-05-12 - 2014-05-13 NMBU Untitled

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