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2019
1 André, Carl; Barth, Julia Maria Isis; Jonsson, Patrik; Jentoft, Sissel; Knutsen, Halvor; Svedäng, Henrik.
Response to comments by Cardinale et al. on “Local cod (Gadus morhua) revealed by egg surveys and population genetic analysis after longstanding depletion on the Swedish Skagerrak coast” by Svedäng et al. (2019). ICES Journal of Marine Science 2019 ;Volum 76.(4) s. 1212-1213
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2 Barth, Julia Maria Isis; Villegas-Ríos, David; Freitas, Carla; Moland, Even; Star, Bastiaan; André, Carl; Knutsen, Halvor; Bradbury, Ian; Dierking, Jan; Petereit, Christoph; Righton, David; Metcalfe, Julian; Jakobsen, Kjetill Sigurd; Olsen, Esben Moland; Jentoft, Sissel.
Disentangling structural genomic and behavioral barriers in a sea of connectivity. Molecular Ecology 2019 ;Volum 28.(6) s. 1394-1411
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3 Blanco Gonzalez, Enrique; Espeland, Sigurd Heiberg; Jentoft, Sissel; Hansen, Michael Møller; Robalo, Joana I.; Stenseth, Nils Christian; Jorde, Per Erik.
Interbreeding between local and translocated populations of a cleaner fish in an experimental mesocosm predicts risk of disrupted local adaptation. Ecology and Evolution 2019 ;Volum 9.(11) s. 6665-6677
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4 Inkpen, Sabrina; Solbakken, Monica Hongrø; Jentoft, Sissel; Eslamloo, Khalil; Rise, Matthew L..
Full characterization and transcript expression profiling of the interferon regulatory factor (IRF) gene family in Atlantic cod (Gadus morhua). Developmental and Comparative Immunology 2019 ;Volum 98. s. 166-180
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5 Mattingsdal, Morten; Jorde, Per Erik; Knutsen, Halvor; Jentoft, Sissel; Stenseth, Nils Christian; Sodeland, Marte; Robalo, Joana I.; Hansen, Michael M.; André, Carl; Blanco Gonzalez, Enrique.
Demographic history has shaped the strongly differentiated corkwing wrasse populations in Northern Europe. Molecular Ecology 2019 s. -
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6 Musilova, Zuzana; Cortesi, Fabio; Matschiner, Michael; Davies, Wayne I. L.; Patel, Jagdish Suresh; Stieb, Sara M.; De Busserolles, Fanny; Malmstrøm, Martin; Tørresen, Ole K.; Brown, Celeste J.; Mountford, Jessica K.; Hanel, Reinhold; Stenkamp, Deborah L.; Jakobsen, Kjetill Sigurd; Carleton, Karen L.; Jentoft, Sissel; Marshall, Justin; Salzburger, Walter.
Vision using multiple distinct rod opsins in deep-sea fishes. Science 2019 ;Volum 364.(6440) s. 588-592
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7 Riiser, Even Sannes; Haverkamp, Thomas Hendricus Augustus; Varadharajan, Srinidhi; Borgan, Ørnulf; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; Star, Bastiaan.
Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod. Environmental Microbiology 2019
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8 Solbakken, Monica Hongrø; Jentoft, Sissel; Reitan, Trond; Mikkelsen, Helene; Gregers, Tone Fredsvik; Bakke, Oddmund; Jakobsen, Kjetill Sigurd; Seppola, Marit.
Disentangling the immune response and host-pathogen interactions in Francisella noatunensis infected Atlantic cod. Comparative Biochemistry and Physiology - Part D:Genomics and Proteomics 2019 ;Volum 30. s. 333-346
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9 Solbakken, Monica Hongrø; Jentoft, Sissel; Reitan, Trond; Mikkelsen, Helene; Jakobsen, Kjetill Sigurd; Seppola, Marit.
Whole transcriptome analysis of the Atlantic cod vaccine response reveals subtle changes in adaptive immunity. Comparative Biochemistry and Physiology - Part D:Genomics and Proteomics 2019 ;Volum 31:100597. s. 1-12
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10 Svedang, Hendrik; Barth, Julia Maria Isis; Svenson, Anders; Jonsson, Patrik; Jentoft, Sissel; Knutsen, Halvor; Andre, Carl.
Local cod (Gadus morhua) revealed by egg surveys and population genetic analysis after longstanding depletion on the Swedish Skagerrak coast. ICES Journal of Marine Science 2019 ;Volum 76.(2) s. 418-429
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11 Weist, Peggy; Schade, Franziska M.; Damerau, Malte; Barth, Julia Maria Isis; Dierking, Jan; Andre, Carl; Petereit, Christoph; Reusch, Thorsten; Jentoft, Sissel; Hanel, Reinhold; Krumme, Uwe.
Assessing SNP-markers to study population mixing and ecological adaptation in Baltic cod. PLOS ONE 2019 ;Volum 14.(6)
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2018
12 Blanco Gonzalez, Enrique; Jentoft, Sissel; Hansen, Michael Møller; Knutsen, Halvor; Sodeland, Marte; Mattingsdal, Morten; Stenseth, Nils Christian; Robalo, Joana I.; Jorde, Per Erik.
Understanding adaptation in translocating wrasses. Forskningsrådets havforskningskonferanse; 2018-10-24 - 2018-10-25
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13 Hoff, Siv Nam Khang; Baalsrud, Helle Tessand; Tooming-Klunderud, Ave; Skage, Morten; Richmond, Todd; Obernosterer, Gregor; Shirzadi, Reza; Tørresen, Ole K.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Long‐read sequence capture of the haemoglobin gene clusters across codfish species. Molecular Ecology Resources 2018 ;Volum 19.(1) s. 245-259
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14 Jorde, Per Erik; Kleiven, Alf Ring; Sodeland, Marte; Olsen, Esben Moland; Ferter, Keno; Jentoft, Sissel; Knutsen, Halvor.
Who is fishing on what stock: Population-of-origin of individual cod (Gadus morhua) in commercial and recreational fisheries. ICES Journal of Marine Science 2018 ;Volum 75.(6) s. 2153-2162
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15 Langangen, Øystein; Färber, Leonie Anette; Stige, Leif Christian; Diekert, Florian Klaus; Barth, Julia Maria Isis; Matschiner, Michael; Berg, Paul Ragnar; Star, Bastiaan; Stenseth, Nils Christian; Jentoft, Sissel; Durant, Joel Marcel.
Ticket to spawn: Combining economic and genetic data to evaluate the effect of climate and demographic structure on spawning distribution in Atlantic cod. Global Change Biology 2018 ;Volum 25.(1) s. 134-143
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16 Lie, Kai Kristoffer; Tørresen, Ole K.; Solbakken, Monica Hongrø; Rønnestad, Ivar; Tooming-Klunderud, Ave; Nederbragt, Alexander Johan; Jentoft, Sissel; Sæle, Øystein.
Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish. BMC Genomics 2018 ;Volum 19.(186) s. 1-17
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17 Machado, Andrè M.; Tørresen, Ole K.; Kabeya, Naoki; Couto, Alvarina; Petersen, Bent; Felício, Mónica; Campos, Paula F.; Fonseca, Elza; Bandarra, Narcisa; Lopes-Marques, Mónica; Ferraz, Renato; Ruivo, Raquel; Fonseca, Miguel M.; Jentoft, Sissel; Monroig, Óscar; Da Fonseca, Rute R.; Castro, L. Filipe C..
“Out of the Can”: A Draft Genome Assembly, Liver Transcriptome, and Nutrigenomics of the European Sardine, Sardina pilchardus. Genes 2018 ;Volum 9.(10) s. 1-13
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18 Mattingsdal, Morten; Jentoft, Sissel; Tørresen, Ole K.; Knutsen, Halvor; Hansen, Michael Möller; Robalo, Joana I.; Zagrodzka, Zuzanna; Andre, Carl; Blanco Gonzalez, Enrique.
A continuous genome assembly of the corkwing wrasse (Symphodus melops). Genomics 2018 ;Volum 110.(6) s. 399-403
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19 Oomen, Rebekah Alice; Knutsen, Halvor; Olsen, Esben Moland; Jentoft, Sissel; Stenseth, Nils Chr.; Hutchings, Jeffrey.
Transcriptomic variability in population responses of Atlantic cod to temperature. 5th European Congress of Conservation Biology; 2018-01-01 - 2018-02-01
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20 Reinar, William Brynildsen; Tørresen, Ole K.; Matschiner, Michael; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The impact of repetitive DNA on speciation rates in teleost fish. SMBE 2018; 2018-07-08 - 2018-07-12
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21 Riiser, Even Sannes; Haverkamp, Thomas Hendricus Augustus; Borgan, Ørnulf; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; Star, Bastiaan.
A single vibrionales 16S rRNA oligotype dominates the intestinal microbiome in two geographically separated Atlantic cod populations. Frontiers in Microbiology 2018 ;Volum 9.
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22 Tørresen, Ole K.; Brieuc, Marine Servane; Solbakken, Monica Hongrø; Sørhus, Elin; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Meier, Sonnich; Edvardsen, Rolf; Jentoft, Sissel.
Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats. BMC Genomics 2018 ;Volum 19.(240) s. 1-17
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23 Tørresen, Ole K.; Skrede, Inger; Sandve, Simen Rød; Jentoft, Sissel; Jakobsen, Kjetill Sigurd; Borge, Ole Johan.
Gendykk i norsk natur gir ny kunnskap. Genialt 2018 (4) s. 16-18
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24 Varadharajan, Srinidhi; Sandve, Simen Rød; Gillard, Gareth Benjamin; Tørresen, Ole K.; Mulugeta, Teshome Dagne; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Vøllestad, Leif Asbjørn; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd.
The grayling genome reveals selection on gene expression regulation after whole-genome duplication. Genome Biology and Evolution 2018 ;Volum 10.(10) s. 2785-2800
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2017
25 Baalsrud, Helle Tessand; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Salzburger, Walter; Hanel, Reinhold; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
De Novo Gene Evolution of Antifreeze Glycoproteins in Codfishes Revealed by Whole Genome Sequence Data. Molecular biology and evolution 2017 ;Volum 35.(3) s. 593-606
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26 Baalsrud, Helle Tessand; Voje, Kjetil L.; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Matschiner, Michael; Malmstrøm, Martin; Hanel, Reinhold; Salzburger, Walter; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth. Scientific Reports 2017 ;Volum 7. s. 1-10
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27 Barth, Julia Maria Isis; Berg, Paul Ragnar; Jonsson, Per R; Bonanomi, Sara; Corell, Hanna; Hemmer-Hansen, Jakob; Jakobsen, Kjetill Sigurd; Johannesson, Kerstin; Jorde, Per Erik; Knutsen, Halvor; Moksnes, Per-Olav; Star, Bastiaan; Stenseth, Nils Christian; Svedang, Henrik; Jentoft, Sissel; Andre, Carl.
Genome architecture enables local adaptation of Atlantic cod despite high connectivity. Molecular Ecology 2017 ;Volum 26.(17) s. 4452-4466
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28 Barth, Julia Maria Isis; Damerau, Malte; Matschiner, Michael; Jentoft, Sissel; Hanel, Reinhold.
Genomic Differentiation and Demographic Histories of Atlantic and Indo-Pacific Yellowfin Tuna (Thunnus albacares) Populations. Genome Biology and Evolution 2017 ;Volum 9.(4) s. 1084-1098
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29 Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; André, Carl; Knutsen, Halvor; Bradbury, Ian; Dierking, Jan; Petereit, Christoph; Righton, David; Metcalfe, Julian; Jakobsen, Kjetill Sigurd; Olsen, Esben Moland; Jentoft, Sissel.
Chromosomal rearrangements as barriers to homogenization in highly mobile fish. Integrated methods to detect polygenic adaptation from genomic data; 2017-08-31 - 2017-09-01
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30 Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; André, Carl; Knutsen, Halvor; Bradbury, Ian; Dierking, Jan; Petereit, Christoph; Righton, David; Metcalfe, Julian; Jakobsen, Kjetill Sigurd; Olsen, Esben Moland; Jentoft, Sissel.
Chromosomal rearrangements as barriers to homogenization in highly mobile fish. Congress of the European Society for Evolutionary Biology; 2017-08-20 - 2017-08-25
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31 Berg, Paul Ragnar; Star, Bastiaan; Pampoulie, Christophe; Bradbury, Ian R.; Bentzen, Paul; Hutchings, Jeffrey; Jentoft, Sissel; Jakobsen, Kjetill Sigurd.
Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions. Heredity 2017 ;Volum 119. s. 418-428
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32 Inkpen, Sabrina; Eslamloo, Khalil; Solbakken, Monica Hongrø; Jentoft, Sissel; Andreassen, Rune; Rise, Matthew L..
Characterization and Expression Studies of the Interferon Regulatory Factor Gene Family in Atlantic cod (Gadus morhua). 56th Canadian Society of Zoologists meeting, University of Manitoba, Winnipeg, Canada; 2017-05-15 - 2017-05-19
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33 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Whole genome sequencing data and de novo draft assemblies for 66 teleost species. Scientific Data 2017 ;Volum 4. s. 1-13
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34 Matschiner, Michael; Star, Bastiaan; Barth, Julia Maria Isis; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Genomic rearrangements a phylogenetic approach. Aqua Genome Researcher Meeting; 2017-03-02 - 2017-03-02
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35 Meier, Sonnich; Karlsen, Ørjan; Le Goff, Jérémie; Sørensen, Lisbet; Edvardsen, Rolf; Jentoft, Sissel; Skogland, Karianne; Fjelldal, Per Gunnar; Pampanin, Daniela Maria; Dunaevskaya, Evgenia; Romano, Marta; Myers, Mark; Grøsvik, Bjørn Einar.
DNA damage and health effects in juvenile haddock exposed to sediment or produced water associated PAHs. : Havforskningsinstituttet 2017 81 s. Rapport fra havforskningen(Nr. 3 - 2017)
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36 Skage, Morten; Barth, Julia Maria Isis; Jentoft, Sissel; Øverli, Øyvind; Jakobsen, Kjetill Sigurd.
Genetisk bakgrunn hos ulv (Canis lupus) i Norge og Skandinavia. Oslo: Senter for økologisk og evolusjonær syntese, Institutt for biovitenskap, Universitetet i Oslo 2017 22 s.
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37 Solbakken, Monica Hongrø; Voje, Kjetil L.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Linking species habitat and past palaeoclimatic events to evolution of the teleost innate immune system. Proceedings of the Royal Society of London. Biological Sciences 2017 ;Volum 284.(1853) s. 1-9
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38 Star, Bastiaan; Boessenkool, Sanne; Gondek, Agata Teresa; Nikulina, Elena A.; Hufthammer, Anne Karin; Pampoulie, Christophe; Knutsen, Halvor; André, Carl; Nistelberger, Heidi Maria; Dierking, Jan; Petereit, Christoph; Heinrich, Dirk; Jakobsen, Kjetill Sigurd; Stenseth, Nils Christian; Jentoft, Sissel; Barrett, James H..
Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany. Proceedings of the National Academy of Sciences of the United States of America 2017 ;Volum 114.(34) s. 9152-9157
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39 Sørhus, Elin; Incardona, John P.; Furmanek, Tomasz; Goetz, Giles W.; Scholz, Nathaniel; Meier, Sonnich; Edvardsen, Rolf; Jentoft, Sissel.
Novel adverse outcome pathways revealed by chemical genetics in a developing marine fish. eLIFE 2017 ;Volum 6:e20707. s. 1-30
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40 Sørhus, Elin; Meier, Sonnich; Incardona, John P.; Rolf, Edvardsen; Scholz, Nathaniel; Jentoft, Sissel; Goetz, Giles W; Furmanek, Tomasz.
RNA-Seq reveals novel impacts of PAHs on excitation-transcription coupling in cardiomyocytes. IUPS 2017; 2017-08-01 - 2017-08-05
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41 Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Reinar, William Brynildsen; Grove, Harald; Miller, Jason R.; Walenz, Brian; Knight, James; Ekholm, Jenny M.; Peluso, Paul; Edvardsen, Rolf; Tooming-Klunderud, Ave; Skage, Morten; Lien, Sigbjørn; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan.
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod. BMC Genomics 2017 ;Volum 18. s. 1-23
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2016
42 Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; Berg, Paul Ragnar; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Ancient genomic variation separates Atlantic cod ecotypes; implications for management. 7th World Fisheries Congress; 2016-05-23 - 2016-05-27
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43 Berg, Paul Ragnar; Star, Bastiaan; Pampoulie, Christophe; Sodeland, Marte; Barth, Julia Maria Isis; Knutsen, Halvor; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod. Scientific Reports 2016 ;Volum 6. s. 1-12
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44 Elin, Sørhus; John, Incardona; Furmanek, Tomasz; Scholz, Nathaniel; Meier, Sonnich; Jentoft, Sissel; Edvardsen, Rolf.
Transcriptomics identifies novel adverse outcome pathways from crude oil exposure in haddock early life history stages. SETAC 2016; 2016-11-06 - 2016-11-10
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45 Gante, Hugo F; Matschiner, Michael; Malmstrøm, Martin; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; Salzburger, Walter.
Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika. Molecular Ecology 2016 ;Volum 25.(24) s. 6143-6161
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46 Lien, Sigbjørn; Koop, Ben F; Sandve, Simen Rød; Miller, Jason R.; Kent, Matthew Peter; Nome, Torfinn; Hvidsten, Torgeir Rhoden; Leong, Jong; Minkley, David R.; Zimin, Aleksey; Grammes, Fabian; Grove, Harald; Gjuvsland, Arne Bjørke; Walenz, Brian; Hermansen, Russell A.; von Schalburg, Kristian R.; Rondeau, Eric; Genova, Alex Di; Antony Samy, Jeevan Karloss; Vik, Jon Olav; Vigeland, Magnus Dehli; Caler, Lis; Grimholt, Unni; Jentoft, Sissel; Våge, Dag Inge; de Jong, Pieter J.; Moen, Thomas; Baranski, Matthew; Palti, Yniv; Smith, Douglas W.; Yorke, James A.; Nederbragt, Alexander J.; Tooming-Klunderud, Ave; Jakobsen, Kjetill Sigurd; Jiang, Xuanting; Fan, Dingding; Hu, Yan; Liberles, David A.; Vidal, Rodrigo; Iturra, Patricia; Jones, Steven J.M.; Jonassen, Inge; Maass, Alejandro; Omholt, Stig William; Davidson, William S.
The Atlantic salmon genome provides insights into rediploidization. Nature 2016 ;Volum 533.(7602) s. 200-205
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47 MacKenzie, Simon; Jentoft, Sissel.
Future perspective. I: Genomics in Aquaculture. Elsevier 2016 ISBN 9780128014189. s. 275-277
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48 MacKenzie, Simon; Jentoft, Sissel.
Genomics in Aquaculture. Elsevier 2016 (ISBN 9780128014189) 304 s.
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49 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav; Hansen, Thomas F; Baalsrud, Helle Tessand; Nederbragt, Alexander Johan; Hanel, Reinhold; Salzburger, Walter; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics 2016 ;Volum 48.(10) s. 1204-1210
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50 Oomen, Rebekah Alice; Knutsen, Halvor; Olsen, Esben Moland; Jentoft, Sissel; Stenseth, Nils Christian; Hutchings, Jeffrey.
Genetic variability in population responses of Atlantic cod to temperature. Canadian Conference for Fisheries Research; 2016-01-08
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