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English
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For å registrere i Cristin må du være vitenskapelig eller administrativt ansatt.
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2023
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1. |
Flobak, Åsmund; Zobolas, John; Vázquez, Miguel; Steigedal, Tonje S.; Thommesen, Liv; Grislingås, Asle Andreas; Niederdorfer, Barbara; Folkesson, Emma Evelina; Kuiper, Martin. Fine tuning a logical model of cancer cells to predict drug synergies: combining manual curation and automated parameterization. Frontiers in Systems Biology 2023 ;Volum 3. NTNU UiO
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2. |
Heck, Kathleen; Lindholm, Håvard Takle; Niederdorfer, Barbara; Tsirvouli, Eirini; Kuiper, Martin; Flobak, Åsmund; Lægreid, Astrid Renner; Thommesen, Liv. Characterisation of Colorectal Cancer Cell Lines through Proteomic Profiling of Their Extracellular Vesicles. Proteomes 2023 ;Volum 11.(1) s. - NTNU STO
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2020
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3. |
Folkesson, Evelina; Niederdorfer, Barbara; Nakstad, Vu To; Thommesen, Liv; Klinkenberg, Geir; Lægreid, Astrid; Flobak, Åsmund. Author Correction: High-throughput screening reveals higher synergistic effect of MEK inhibitor combinations in colon cancer spheroids (Scientific Reports, (2020), 10, 1, (11574), 10.1038/s41598-020-68441-0). Scientific Reports 2020 ;Volum 10.(1) s. - NTNU SINTEF STO
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4. |
Folkesson, Evelina; Niederdorfer, Barbara; To, Vu; Thommesen, Liv; Klinkenberg, Geir; Lægreid, Astrid; Flobak, Åsmund. High-throughput screening reveals higher synergistic effect of MEK inhibitor combinations in colon cancer spheroids. Scientific Reports 2020 ;Volum 10. STO SINTEF NTNU
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5. |
Niederdorfer, Barbara; Touré, Vasundra; Vazques, Miguel; Thommesen, Liv; Kuiper, Martin Tremen R.; Lægreid, Astrid; Flobak, Åsmund. Strategies to Enhance Logic Modeling-Based Cell Line-Specific Drug Synergy Prediction. Frontiers in Physiology 2020 ;Volum 11. s. - STO NTNU
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2019
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6. |
Flobak, Åsmund; Niederdorfer, Barbara; To, Vu; Thommesen, Liv; Klinkenberg, Geir; Lægreid, Astrid. A high-throughput drug combination screen of targeted small molecule inhibitors in cancer cell lines. Scientific Data 2019 ;Volum 6. s. 1-10 SINTEF STO NTNU
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7. |
Menden, Michael Patrick; Wang, Dennis; Mason, Mike J.; Szalai, Bence; Bulusu, Krishna C.; Guan, Yuanfang; Flobak, Åsmund; Kuiper, Martin; Lægreid, Astrid; Thommesen, Liv. Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen. Nature Communications 2019 ;Volum 10.(2674) NTNU
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8. |
Mjelle, Robin; Sjursen, Wenche; Thommesen, Liv; Sætrom, Pål; Hofsli, Eva. Small RNA expression from viruses, bacteria and human miRNAs in colon cancer tissue and its association with microsatellite instability and tumor location. BMC Cancer 2019 ;Volum 19.(1) s. 1-12 STO NTNU
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2018
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9. |
Cobo, Isidoro; Martinelli, Paola; Flández, Marta; Bakiri, Latifa; Zhang, Mingfeng; Carrillo-de-Santa-Pau, Enrique; Jia, Jinping; Lobo, Víctor J. Sánchez-Arévalo; Megías, Diego; Felipe, Irene; del Pozo, Natalia; Millán, Irene; Thommesen, Liv; Bruland, Torunn; Olson, Sara H.; Smith, Jill; Schoonjans, Kristina; Bamlet, William R.; Petersen, Gloria M.; Malats, Núria; Amundadóttir, Laufey T.; Wagner, Erwin F.; Real, Francisco X.. Transcriptional regulation by NR5A2 links differentiation and inflammation in the pancreas. Nature 2018 ;Volum 554.(7693) s. 533-537 NTNU STO
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10. |
Niederdorfer, Barbara; Vázquez, Miguel; Thommesen, Liv; Kuiper, Martin; Lægreid, Astrid; Flobak, Åsmund. Logical model simulations predict drug synergies across different cancer cell lines. ISMB 2018; 2018-07-06 - 2018-07-10 NTNU
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2017
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11. |
Acencio, Marcio Luis; Lægreid, Astrid; Kuiper, Martin; Thommesen, Liv; Leitner, Florian; Krallinger, Martin; Lourenço, Analia; Vázquez, Miguel; Valencia, Alfonso. NTNU DbTF Curation: current status and Mining Transcription Regulation Information from Literature. Short Research Stay at the European Bioinformatics Institute (EBI); 2017-05-08 - 2017-05-10 NTNU
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12. |
Mjelle, Robin; Sellæg, Kjersti; Sætrom, Pål; Thommesen, Liv; Sjursen, Wenche; Hofsli, Eva. Identification of metastasis-associated microRNAs in serum from rectal cancer patients. OncoTarget 2017 ;Volum 8.(52) s. 90077-90089 STO NTNU
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13. |
Rao, Shalini; Solum, Guri; Niederdorfer, Barbara; Nørsett, Kristin; Bjørkøy, Geir; Thommesen, Liv. Gastrin activates autophagy and increases migration and survival of gastric adenocarcinoma cells. BMC Cancer 2017 ;Volum 17:68. s. 1-13 NTNU
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2016
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14. |
Bhandari, Sabin; Bakke, Ingunn; Kumar, J. Dinesh; Beisvag, Vidar; Sandvik, Arne Kristian; Thommesen, Liv; Varro, Andrea; Nørsett, Kristin. Connective tissue growth factor is activated by gastrin and involved in gastrin-induced migration and invasion. Biochemical and Biophysical Research Communications - BBRC 2016 ;Volum 475.(1) Suppl. 1 s. 119-124 NTNU STO
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15. |
Flobak, Åsmund; Steigedal, Tonje S.; Thommesen, Liv; Kuiper, Martin Tremen R.; Lægreid, Astrid. Logical models for drug screen prioritization. European Conference on Computational Biology; 2016-09-03 - 2016-09-07 NTNU UiO
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16. |
Fossmark, Reidar; Rao, Shalini; Mjønes, Patricia; Munkvold, Bjørn; Flatberg, Arnar; Varro, Andrea; Thommesen, Liv; Nørsett, Kristin. PAI-1 deficiency increases the trophic effects of hypergastrinemia in the gastric corpus mucosa. Peptides 2016 ;Volum 79. s. 83-94 NTNU STO
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17. |
Tripathi, Sushil; Vercruysse, Steven; Chawla, Konika; Christie, Karen R.; Blake, Judith A; Huntley, Rachael P.; Orchard, Sandra; Hermjakob, Henning; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. Gene regulation knowledge commons: community action takes care of DNA binding transcription factors. Database: The Journal of Biological Databases and Curation 2016 s. - NTNU
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2015
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18. |
Flobak, Åsmund; Baudot, Anaïs; Remy, Elisabeth; Thommesen, Liv; Thieffry, Denis; Kuiper, Martin; Lægreid, Astrid. Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling. PLoS Computational Biology 2015 ;Volum 11.(8) NTNU
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19. |
Fossmark, Reidar; Rao, Shalini; Mjønes, Patricia; Munkvold, Bjørn; Varro, Andrea; Thommesen, Liv; Nørsett, Kristin. PAI-1 inhibits gastrin induced proliferation of the gastric oxyntic mucosa. 51th NBS Contact Meeting; 2015-02-09 - 2015-02-13 NTNU
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20. |
Tripathi, Sushil; Flobak, Åsmund; Chawla, Konika; Baudot, Anaïs; Bruland, Torunn; Thommesen, Liv; Kuiper, Martin Tremen R.; Lægreid, Astrid. The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms. BMC Systems Biology 2015 ;Volum 9.(40) s. - NTNU
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2014
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21. |
Bhandari, Sabin; Bakke, Ingunn; Thommesen, Liv; Sandvik, Arne Kristian; Nørsett, Kristin. Connective tissue growth factor is activated by gastrin and involved in gastrin-induced migration and invasion. 50th NBS Contact Meeting; 2014-01-23 - 2014-01-26 NTNU
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22. |
Flobak, Åsmund; Baudot, Anaïs; Remy, Elisabeth; Thommesen, Liv; Thieffry, Denis; Kuiper, Martin; Lægreid, Astrid. Drug synergies in a gastric cancer cell line discovered by signal transduction modeling. Virtual Physiological Human Conference 2014; 2014-09-09 - 2014-09-12 NTNU
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23. |
Rao, Shalini; Bjørnetrø, Tonje; Nørsett, Kristin; Thommesen, Liv. Gastrin activates NR4A2 and influences the nucleo-cytoplasmatic scuttling in gastric adenocarcinoma cells. 50th NBS Contact Meeting; 2014-01-23 - 2014-01-26 NTNU
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24. |
Rao, Shalini; Solum, Guri; Nørsett, Kristin; Bjørkøy, Geir; Thommesen, Liv. Gastrin influences autophagy and vesicular transport in gastric adenocarcinoma cells. 50th NBS Contact Meeting; 2014-01-23 - 2014-01-26 NTNU UIS
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25. |
Selvik, Linn-Karina M.; Rao, Shalini; Steigedal, Tonje; Haltbakk, Ildri; Misund, Kristine; Bruland, Torunn; Prestvik, Wenche S; Lægreid, Astrid; Thommesen, Liv. Salt-inducible kinase 1 (SIK1) is induced by gastrin and inhibits migration of gastric adenocarcinoma cells. PLOS ONE 2014 ;Volum 9.(11) s. - NTNU
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26. |
Thommesen, Liv. Utestengt i fem år. Klassekampen 2014 NTNU
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27. |
Thommesen, Liv; Rao, Shalini; Solum, Guri; Nørsett, Kristin; Bjørkøy, Geir. gastrin influences autophagy in gastric adenocarcinoma cells. Kontaktmøte Norsk Biokjemisk SElskap; 2014-01-16 - 2014-01-19 NTNU UIS
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28. |
Vange, Pål; Beisvag, Vidar; Flatberg, Arnar; Afroz, Wahida; Nordrum, Ivar Skjåk; Sørdal, Øystein Finset; Qvigstad, Gunnar; Thommesen, Liv; Lægreid, Astrid; Sandvik, Arne Kristian; Bruland, Torunn; Bakke, Ingunn. Molecular mechanisms of cellular stress responses in gastric cancer. Digestive Disease Week 2014; 2014-05-03 - 2014-05-06 NTNU STO
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2013
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29. |
Chawla, Konika; Tripathi, Sushil; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors. Bioinformatics 2013 ;Volum 29.(19) s. 2519-2520 NTNU
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30. |
Hofsli, Eva; Sjursen, Wenche; Prestvik, Wenche S; Johansen, Jostein; Rye, Morten Beck; Tranø, Gerd; Wasmuth, Hans; Hatlevoll, Ingunn; Thommesen, Liv. Identification of serum microRNA profiles in colon cancer. British Journal of Cancer 2013 ;Volum 108.(8) s. 1712-1719 NTNU STO
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31. |
Johnsen, Ingvild Bjellmo; Bergstrøm, Bjarte Aune; Stiberg, Kim Andre Ha; Thommesen, Liv; Anthonsen, Marit Walbye. Inducible cAMP early repressor (ICER) is a novel regulator of RIG-I mediated IFN-beta production. Cellular Signalling 2013 ;Volum 25.(9) s. 1804-1812 NTNU
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32. |
Misund, Kristine; Selvik, Linn-Karina M.; Rao, Shalini; Nørsett, Kristin Gabestad; Bakke, Ingunn; Sandvik, Arne; Lægreid, Astrid; Bruland, Torunn; Prestvik, Wenche S; Thommesen, Liv. NR4A2 is regulated by Gastrin and involved in gastrin-induced migration and invasion of gastric adenocarcinoma cells. PLOS ONE 2013 ;Volum 8.(9) Suppl. e76234 s. - NTNU STO
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33. |
Rao, Shalini; Selvik, Linn-Karina M.; Nørsett, Kristin Gabestad; Bakke, Ingunn; Misund, Kristine; Bruland, Torunn; Wenche S, Prestvik; Lægreid, Astrid; Thommesen, Liv. NR4A2 is regulated by gastrin and influences cellular responses in gastric adenocarcinoma cells. Nuclear receptors: Linking molecules, genomes & physiology; 2013-09-06 - 2013-09-10 NTNU
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34. |
Rao, Shalini; Thommesen, Liv; Nørsett, Kristin; Bakke, Ingunn; Misund, Kristine; Bruland, Torunn; Prestvik, Wenche S; Lægreid, Astrid. Nr4A2 is regulated by gastrin and influences cellular responses in gastric adenocarcinoma cells. Kontaktmøte Norsk Biokjemisk Selskap; 2013-01-17 - 2013-01-20 NTNU
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35. |
Selvik, Linn-Karina M.; Fjeldbo, Christina Sæten; Flatberg, Arnar; Steigedal, Tonje; Misund, Kristine; Anderssen, Endre; Doseth, Berit; Langaas, Mette; Tripathi, Sushil; Beisvag, Vidar; Lægreid, Astrid; Thommesen, Liv; Bruland, Torunn. The duration of gastrin treatment affects global gene expression and molecular responses involved in ER stress and anti-apoptosis. BMC Genomics 2013 ;Volum 14. s. - NTNU
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36. |
Steigedal, Tonje; Prestvik, Wenche S; Selvik, Linn-Karina M.; Fjeldbo, Christina Sæten; Bruland, Torunn; Lægreid, Astrid; Thommesen, Liv. Gastrin-induced proliferation involves MEK partner 1 (MP1). In vitro Cellular & Developmental Biology-Animal 2013 ;Volum 49.(3) s. 162-169 NTNU
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37. |
Tripathi, Sushil; Christie, KR; Balakrishnan, Ravin; Huntley, R; Hill, DP; Thommesen, Liv; Blake, JA; Kuiper, Martin; Lægreid, Astrid. Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort. Database: The Journal of Biological Databases and Curation 2013 s. - NTNU
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38. |
Vange, Pål; Beisvag, Vidar; Flatberg, Arnar; Rao, Shalini; Sandvik, Arne Kristian; Thommesen, Liv; Bruland, Torunn; Bakke, Ingunn. Gastric cancer biology – clusterin facilitates the growth promoting effects of gastrin. NBS Contact Meeting 2013; 2013-01-31 - 2013-02-03 NTNU
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2012
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39. |
Fjeldbo, Christina Sæten; Bakke, Ingunn; Erlandsen, Sten Even; Holmseth, Jannicke; Lægreid, Astrid; Sandvik, Arne Kristian; Thommesen, Liv; Bruland, Torunn. Gastrin upregulates the pro-survival factor secretory clusterin (sCLU) in adenocarcinoma cells and in oxyntic mucosa of hypergastrinemic rats. American Journal of Physiology - Gastrointestinal and Liver Physiology 2012 ;Volum 302.(1) s. G21-G33 NTNU STO
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40. |
Rao, Shalini; Klein, Dionne; Nørsett, Kristin; Thommesen, Liv. FRAP analysis of NR4A2 protein in gastric adenocarcinoma cells. 5th NorMic Meeting; 2012-10-25 - 2012-10-26 NTNU
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2011
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41. |
Hunjet, Sandra; Podsada, Linda; Bratberg, Kari; Thommesen, Liv. Holdbarhet og oppbevaring av blodprøver til PT-INR. Bioingeniøren 2011 (12) s. 15-17 NTNU STO
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42. |
Tripathi, Sushil; Venkatesan, Aravind; Egaña, Mikel; Zavareh, Zahra; Chawla, Konika; Mironov, Vladimir; Thommesen, Liv; Bruland, Torunn; Kuiper, Martin; Lægreid, Astrid. Automated Assessment of High Throughput Hypotheses on Gene Regulatory Mechanisms Involved in the Gastrin Response. Bio-Ontologies 2011; 2011-07-15 - 2011-07-16 NTNU
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2010
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43. |
Bergstrøm, Bjarte Aune; Johnsen, Ingvild Bjellmo; Nguyen, Thank Thuy Thi; Hagen, Lars; Slupphaug, Geir; Thommesen, Liv; Anthonsen, Marit Walbye. Identification of a Novel in Vivo Virus-targeted Phosphorylation Site in Interferon Regulatory Factor-3 (IRF3). Journal of Biological Chemistry 2010 ;Volum 285.(32) s. 24904-24914 NTNU
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44. |
Bergstrøm, Bjarte Aune; Johnsen, Ingvild Bjellmo; Nguyen, Thank Thuy Thi; Hagen, Lars; Slupphaug, Geir; Thommesen, Liv; Anthonsen, Marit Walbye. Identification of a novel in vivo virus-targeted phosphorylation site in interferon regulatory factor-3 (IRF3). The 6th Norwegian Proteomics Conference; 2010-12-09 - 2010-12-10 NTNU
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45. |
Bruland, Torunn; Anderssen, Endre; Misund, Kristine; Fjeldbo, Christina Sæten; Flatberg, Arnar; Selvik, Linn-Karina M.; Beisvag, Vidar; Sandvik, Arne Kristian; Lægreid, Astrid; Thommesen, Liv. Exploring signal-induced cellular regulatory subnetworks by use of partial least square regression (PLSR) multidimensional analysis of gene expression time series data. 13th Annual MGED meeting , Boston, Massachusetts, USA; 2010-07-13 - 2010-07-15 NTNU
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46. |
Fjeldbo, Christina Sæten; Misund, Kristine; Günther, Clara-Cecilie; Langaas, Mette; Steigedal, Tonje; Thommesen, Liv; Lægreid, Astrid; Bruland, Torunn. Functional studies on RNA-transfected cell microarrays. Methods in molecular biology 2010 ;Volum 629. s. 175-191 NTNU
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47. |
Thommesen, Liv. Vegetarmat i et vitenskapelig perspektiv. Bioingeniøren 2010 (9) s. 24- NTNU
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48. |
Tripathi, Sushil; Thommesen, Liv; Skjøndal-Bar, Nadav; Almaas, Eivind; Kuiper, Martin; Lægreid, Astrid. Modelling the gastrin signalling pathways. 11th International Conference on Systems Biology; 2010-10-10 - 2010-10-16 NTNU
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49. |
Tripathi, Sushil; Thommesen, Liv; Skjøndal-Bar, Nadav; Almaas, Eivind; Kuiper, Martin; Lægreid, Astrid. Modelling the gastrin signalling pathways. 22nd International Conference of the Society for Medical Innovation and Technology; 2010-09-02 - 2010-09-04 NTNU
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2009
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50. |
Anderssen, Endre; Bruland, Torunn; Misund, Kristine; Sandvik, Arne K.; Thommesen, Liv; Lægreid, Astrid. Using basic networks motifs and biological background knowledge to analyze transcriptomic time series data. MGED Meeting; 2009-10-05 - 2009-10-08 NTNU
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