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Etternavn: Snipen   Fornavn: Lars-Gustav   Alle publ. kanaler

Viser treff 1-50 av 142 << Forrige 1 2 3    Neste >>

2023
1 Hiseni, Pranvera; Snipen, Lars-Gustav; Wilson, Robert Charles; Furu, Kari; Hegge, Finn Terje; Rudi, Knut.
Prediction of high fecal propionate-to-butyrate ratios using 16S rRNA-based detection of bacterial groups with liquid array diagnostics. BioTechniques 2023 ;Volum 74.(1) s. 9-21
HINN NMBU Untitled
 
2 Liland, Kristian Hovde; Tomic, Oliver; Indahl, Ulf Geir; Futsæther, Cecilia Marie; Jiao, Lei; Granmo, Ole-Christoffer; Snipen, Lars-Gustav.
Tsetlin Machine in DNA sequence classification. International Symposium on the Tsetlin Machine 2023; 2023-08-29 - 2023-08-30
NMBU UiO NOFIMA UIA Untitled
 
3 Liland, Kristian Hovde; Tomic, Oliver; Indahl, Ulf Geir; Futsæther, Cecilia Marie; Lei, Jiao; Granmo, Ole-Christoffer; Snipen, Lars-Gustav.
Tsetlin Machine in DNA sequence classification : Application to prokaryote gene prediction / A match made in silico. I: 2023 International Symposium on the Tsetlin Machine (ISTM). IEEE conference proceedings 2023 ISBN 979-8-3503-4477-6.
UIA NMBU Untitled
 
4 Nilsen, Morten; Nygaard, Unni Cecilie; Brodin, Petter; Carlsen, Karin Cecilie Lødrup; Fredheim, Cecilie; Haugen, Guttorm Nils; Hedlin, Gunilla; Jonassen, Christine Genevieve Monceyron; Jonsmoen, Unni Lise Albertsdottir; Lakshmikanth, Tadepally; Nordlund, Björn; Olin, Axel; Rehbinder, Eva Maria; Skjerven, Håvard O.; Snipen, Lars; Staff, Anne Cathrine; Söderhäll, Cilla; Vettukattil, Muhammad Riyas; Rudi, Knut.
Gut bacteria at 6 months of age are associated with immune cell status in 1-year-old children. Scandinavian Journal of Immunology 2023 s. -
OSTFSYK FHI OUS UiO NMBU Untitled
 
5 Nilsen, Morten; Rehbinder, Eva Maria; Carlsen, Karin Cecilie Lødrup; Haugen, Guttorm Nils; Hedlin, Gunilla; Jonassen, Christine M; Killingstad, Madeleine-Emilie; Nordlund, Bjørn Kristian; Ormaasen, Ida; Skjerven, Håvard Ove; Snipen, Lars-Gustav; Staff, Anne Cathrine; Söderhäll, Cilla; Sørensen, Regina; Vettukattil, Muhammad Riyas; Wilborn, Lene Marie; Rudi, Knut.
A Globally Distributed Bacteroides caccae Strain Is the Most Prevalent Mother-Child Shared Bacteroidaceae Strain in a Large Scandinavian Cohort. Applied and Environmental Microbiology 2023 ;Volum 89.(7) s. 1-15
NMBU UiO OUS OSTFSYK Untitled
 
6 Ormaasen, Ida; Rudi, Knut; Diep, Bao Dung; Snipen, Lars-Gustav.
Metagenome-mining indicates an association between bacteriocin presence and strain diversity in the infant gut. BMC Genomics 2023 ;Volum 24.(1) s. -
NMBU Untitled
 
2022
7 Hiseni, Pranvera; Snipen, Lars Gustav; Wilson, Robert Charles; Furu, Kari; Rudi, Knut.
Questioning the Quality of 16S rRNA Gene Sequences Derived From Human Gut Metagenome-Assembled Genomes. Frontiers in Microbiology 2022
NMBU HINN Untitled
 
8 León, Arturo Vera-Ponce; Hötzinger, Matthias; Mangseth Johnsen, Sander Johan; Agerbo Rasmussen, Jacob; Rudi, Knut; Snipen, Lars-Gustav; Karlsen, Christian René; Limborg, Morten Tønsberg; Bertilsson, Stefan; Sandve, Simen Rød; Pope, Phillip; Leanti La Rosa, Sabina.
The Salmon Microbial Genome Atlas enables novel insights into bacteria-host interactions via functional mapping. Norwegian Society for Microbiology (NFM) meeting; 2022-11-09 - 2022-11-09
HINN NMBU Untitled
 
9 Pettersen, Ragnhild; Ormaasen, Ida; Angell, Inga Leena; Keeley, Nigel B.; Lindseth, A.; Snipen, Lars-Gustav; Rudi, Knut.
Bimodal distribution of seafloor microbiota diversity and function are associated with marine aquaculture. Marine Genomics 2022 ;Volum 66. s. -
AKVAPLAN NMBU HAVFORSK Untitled
 
2021
10 Hiseni, Pranvera; Rudi, Knut; Wilson, Robert Charles; Hegge, Finn Terje; Snipen, Lars Gustav.
HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data. Microbiome 2021 ;Volum 9. s. -
NMBU HINN Untitled
 
11 Hiseni, Pranvera; Rudi, Knut; Wilson, Robert Charles; Hegge, Finn Terje; Snipen, Lars-Gustav.
HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data. Microbiome 2021
NMBU HINN Untitled
 
12 Lokmic, Asima; Angell, Inga Leena; Carlsen, Karin Cecilie Lødrup; Carlsen, Kai-Håkon; Haugen, Guttorm Nils; Hedlin, Gunilla; Jonassen, Christine Monceyron; Marsland, Benjamin J.; Nordlund, Björn; Rehbinder, Eva Maria; Saunders, Carina Madelen; Skjerven, Håvard Ove; Snipen, Lars-Gustav; Staff, Anne Cathrine; Söderhäll, Cilla; Vettukattil, Muhammad Riyas; Rudi, Knut.
Fecal Microbiota Nutrient Utilization Potential Suggests Mucins as Drivers for Initial Gut Colonization of Mother-Child-Shared Bacteria. Applied and Environmental Microbiology 2021
NMBU UiO OUS HINN Untitled
 
13 Nilsen, Morten; Lokmic, Asima; Angell, Inga Leena; Carlsen, Karin C. Lødrup; Carlsen, Kai-Håkon; Haugen, Guttorm; Hedlin, Gunilla; Jonassen, Christine M; Marsland, Benjamin J.; Nordlund, Björn; Rehbinder, Eva Maria; Schinagl, Carina Madelen; Skjerven, Håvard Ove; Snipen, Lars Gustav; Staff, Anne Cathrine; Söderhäll, Cilla; Vettukattil, Muhammad Riyas; Rudi, Knut.
Fecal Microbiota Nutrient Utilization Potential Suggests Mucins as Drivers for Initial Gut Colonization of Mother-Child-Shared Bacteria. Applied and Environmental Microbiology 2021 ;Volum 87.(6) s. -
NMBU OUS UiO OSTFSYK Untitled
 
14 Nilsen, Morten; Lokmic, Asima; Angell, Inga Leena; Carlsen, Karin Cecilie Lødrup; Carlsen, Kai-Håkon; Haugen, Guttorm Nils; Hedlin, Gunilla; Jonassen, Christine Monceyron; Marsland, Benjamin J.; Nordlund, Björn; Rehbinder, Eva Maria; Saunders, Carina Madelen; Skjerven, Håvard Ove; Snipen, Lars-Gustav; Staff, Anne Cathrine; Söderhäll, Cilla; Vettukattil, Muhammad Riyas; Rudi, Knut.
Fecal Microbiota Nutrient Utilization Potential Suggests Mucins as Drivers for Initial Gut Colonization of Mother-Child-Shared Bacteria. Applied and Environmental Microbiology 2021
OUS NMBU UiO HINN Untitled
 
15 Salzmann, Andrea Patrizia; Arora, Natasha; Russo, Giancarlo; Kreutzer, Susanne; Snipen, Lars Gustav; Haas, Cordula.
Assessing time dependent changes in microbial composition of biological crime scene traces using microbial RNA markers. Forensic Science International: Genetics 2021 ;Volum 53. s. -
NMBU Untitled
 
16 Snipen, Lars; Angell, Inga-Leena; Rognes, Torbjørn; Rudi, Knut.
Reduced metagenome sequencing for strain-resolution taxonomic profiles. Microbiome 2021 ;Volum 9.(1) s. -
NMBU UiO Untitled
 
2020
17 Nilsen, Morten; Schinagl, Carina Madelen; Angell, Inga Leena; Arntzen, Magnus Øverlie; Carlsen, Karin C. Lødrup; Carlsen, Kai-Håkon; Haugen, Guttorm; Hagen, Live Heldal; Carlsen, Monica Hauger; Hedlin, Gunilla; Jonassen, Christine M; Nordlund, Bjørn; Rehbinder, Eva Maria; Skjerven, Håvard Ove; Snipen, Lars Gustav; Staff, Anne Cathrine; Vettukattil, Muhammad Riyas; Rudi, Knut.
Butyrate Levels in the Transition from an Infant-to an Adult-Like Gut Microbiota Correlate with Bacterial Networks Associated with Eubacterium Rectale and Ruminococcus Gnavus. Genes 2020 ;Volum 11.(11) s. -
OSTFSYK OUS UiO NMBU Untitled
 
2019
18 Dørum, Guro; Ingold, Sabrina; Hanson, Erin; Ballantyne, Jack; Russo, Giancarlo; Aluri, Sirisha; Snipen, Lars-Gustav; Haas, Cordula.
Predicting the origin of stains from whole miRNome massively parallel sequencing data. Forensic Science International: Genetics 2019 ;Volum 40. s. 131-139
NMBU Untitled
 
19 Jin, Yang; Angell, Inga Leena; Sandve, Simen Rød; Snipen, Lars-Gustav; Olsen, Yngvar; Rudi, Knut.
Atlantic salmon raised with diets low in long-chain polyunsaturated n-3 fatty acids in freshwater have a Mycoplasma-dominated gut microbiota at sea. Aquaculture Environment Interactions 2019 ;Volum 11. s. 31-39
NMBU NTNU Untitled
 
20 Liu, Binbin; Zhang, Xiaojun; Bakken, Lars; Snipen, Lars-Gustav; Frostegård, Åsa.
Rapid succession of actively transcribing denitrifier populations in agricultural soil during an anoxic spell. Frontiers in Microbiology 2019 ;Volum 9.
NMBU Untitled
 
2018
21 Dørum, Guro; Ingold, Sabrina; Hanson, Erin; Ballantyne, Jack; Snipen, Lars-Gustav; Haas, Cordula.
Predicting the origin of stains from next generation sequencing mRNA data. Forensic Science International: Genetics 2018 ;Volum 34. s. 37-48
NMBU Untitled
 
22 Hanssen, Eirik Natås; Liland, Kristian Hovde; Gill, Peter; Snipen, Lars-Gustav.
Optimizing body fluid recognition from microbial taxonomic profiles. Forensic Science International: Genetics 2018 ;Volum 37. s. 13-20
NMBU UiO OUS Untitled
 
23 Ravi, Anuradha; Avershina, Ekaterina; Angell, Inga Leena; Ludvigsen, Jane; Manohar, Prasanth; Padmanaban, Sumathi; Nachimuthu, Ramesh; Snipen, Lars-Gustav; Rudi, Knut.
Comparison of reduced metagenome and 16S rRNA gene sequencing for determination of genetic diversity and mother-child overlap of the gut associated microbiota. Journal of Microbiological Methods 2018 ;Volum 149. s. 44-52
NMBU Untitled
 
24 Rudi, Knut; Angell, Inga Leena; Pope, Phillip; Vik, Jon Olav; Sandve, Simen Rød; Snipen, Lars-Gustav.
A stable core gut microbiota across fresh- to saltwater transition for farmed Atlantic salmon. Applied and Environmental Microbiology 2018 ;Volum 84.(2)
NMBU Untitled
 
2017
25 Bohlin, Jon; Eldholm, Vegard; Pettersson, John; Brynildsrud, Ola Brønstad; Snipen, Lars-Gustav.
The nucleotide composition of microbial genomes indicates differential patterns of selection on core and accessory genomes. BMC Genomics 2017 ;Volum 18. s. -
FHI NMBU Untitled
 
26 Bråten, Line Skute; Sødring, Marianne Sundt; Paulsen, Jan Erik; Snipen, Lars-Gustav; Rudi, Knut.
Cecal microbiota association with tumor load in a colorectal cancer mouse model. Microbial Ecology in Health and Disease 2017 ;Volum 28.(1)
NMBU Untitled
 
27 Hanssen, Eirik Natås; Avershina, Ekaterina; Rudi, Knut; Gill, Peter; Snipen, Lars-Gustav.
Body Fluid Prediction from Microbial Patterns for Forensic Application. Forensic Science International: Genetics 2017 ;Volum 30. s. 10-17
UiO NMBU OUS Untitled
 
28 Liland, Kristian Hovde; Vinje, Hilde; Snipen, Lars-Gustav.
microclass: An R-package for 16S taxonomy classification. BMC Bioinformatics 2017 ;Volum 18.(172) s. -
NMBU NOFIMA Untitled
 
29 McLeod, Anette; Mosleth, Ellen Færgestad; Rud, Ida; Branco dos Santos, Filipe; Snipen, Lars-Gustav; Liland, Kristian Hovde; Axelsson, Lars.
Effects of glucose availability in Lactobacillus sakei; metabolic change and regulation of the proteome and transcriptome. PLOS ONE 2017 ;Volum 12:e0187542.(11) s. 1-20
NOFIMA NMBU Untitled
 
2016
30 Liland, Kristian Hovde; Snipen, Lars-Gustav.
fixedTimeEvents: An R package for the distribution of distances between discrete events in fixed time. SoftwareX 2016 ;Volum 5. s. 227-233
NOFIMA NMBU Untitled
 
31 Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav; Hansen, Thomas F; Baalsrud, Helle Tessand; Nederbragt, Alexander Johan; Hanel, Reinhold; Salzburger, Walter; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel.
Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics 2016 ;Volum 48.(10) s. 1204-1210
UiO NMBU UIA HAVFORSK Untitled
 
2015
32 Brynildsrud, Ola Brønstad; Snipen, Lars-Gustav; Bohlin, Jon.
CNOGpro: detection and quantification of CNVs in prokaryotic whole-genome sequencing data. Bioinformatics 2015 ;Volum 31.(11) s. 1708-1715
NMBU FHI Untitled
 
33 Leanti La Rosa, Sabina; Snipen, Lars-Gustav; Murray, Barbara E.; Willems, Rob J.L.; Gilmore, Michael S.; Diep, Dzung Bao; Nes, Ingolf; Brede, Dag Anders.
A genomic virulence reference map of Enterococcus faecalis reveals an important contribution of phage03-like elements in nosocomial genetic lineages to pathogenicity in a Caenorhabditis elegans infection model. Infection and Immunity 2015 ;Volum 83.(5) s. 2156-2167
NMBU Untitled
 
34 Mehmood, Tahir; Bohlin, Jon; Snipen, Lars.
A partial least squares based procedure for upstream sequence classification in prokaryotes. IEEE/ACM Transactions on Computational Biology & Bioinformatics 2015 ;Volum 12.(3) s. 560-567
NMBU Untitled
 
35 Snipen, Lars-Gustav; Liland, Kristian Hovde.
micropan: An R-package for microbial pan-genomics. BMC Bioinformatics 2015 ;Volum 16.(1) s. 1-8
NOFIMA NMBU Untitled
 
36 Vinje, Hilde; Liland, Kristian Hovde; Almøy, Trygve; Snipen, Lars-Gustav.
Comparing K-mer based methods for improved classification of 16S sequences. BMC Bioinformatics 2015 ;Volum 16:205.
NOFIMA NMBU Untitled
 
2014
37 Askarian, Fatemeh; Sangvik, Maria; Hanssen, Anne-Merethe; Snipen, Lars; Sollid, Johanna U. Ericson; Johannessen, Mona.
Staphylococcus aureus nasal isolates from healthy individuals cause highly variable host cell responses in vitro: The Tromsø Staph and Skin Study. Pathogens and Disease 2014 ;Volum 70.(2) s. 158-166
NMBU UiT Untitled
 
38 Bohlin, Jon; Brynildsrud, Ola Brønstad; Sekse, Camilla; Snipen, Lars.
An evolutionary analysis of genome expansion and pathogenicity in Escherichia coli. BMC Genomics 2014 ;Volum 15. s. -
FHI NMBU VETINST Untitled
 
39 Dørum, Guro; Bleka, Øyvind; Gill, Peter; Haned, Hinda; Snipen, Lars; Sæbø, Solve; Egeland, Thore.
Exact computation of the distribution of likelihood ratios with forensic applications. Forensic Science International: Genetics 2014 ;Volum 9.(1) s. 93-101
UiO NMBU FHI Untitled
 
40 Dørum, Guro; Snipen, Lars; Solheim, Margrete; Sæbø, Solve.
Rotation gene set testing for longitudinal expression data. Biometrical Journal 2014 ;Volum 56.(6) s. 1055-1075
NMBU Untitled
 
41 McLeod, Anette; Mosleth, Ellen Færgestad; Snipen, Lars; dos Santos, Filipe Braco; Lysenko, Artem; Rud, Ida; Axelsson, Lars.
The effect of growth rate in Lactobacillus sakei; analysis of experimental data in light of external information. 11th International Symposium on Lactic Acid Bacteria; 2014-08-31 - 2014-09-04
NOFIMA NMBU Untitled
 
42 Solheim, Margrete; Leanti La Rosa, Sabina; Mathiesen, Thomas; Snipen, Lars; Nes, Ingolf; Brede, Dag Anders.
Functional Analysis of NaCl-Induced Stress in Enterococcus faecalis. PLOS ONE 2014 ;Volum 9.(4)
NMBU Untitled
 
43 Vinje, Hilde; Almøy, Trygve; Liland, Kristian Hovde; Snipen, Lars.
A systematic search for discriminating sites in the 16S ribosomal RNA gene. Microbial Informatics and Experimentation 2014 ;Volum 4.(2) s. -
NMBU NOFIMA Untitled
 
2013
44 Mehmood, Tahir; Snipen, Lars.
Clustered Variable Selection by Regularized Elimination in PLS. I: New Perspectives in Partial Least Squares and Related Methods. Springer 2013 ISBN 978-1-4614-8283-3. s. 95-105
NMBU Untitled
 
2012
45 Mehmood, Tahir; Snipen, Lars.
Clustered variable selection by regularized elimination in PLS. PLS2012 Conference proceeding, Houston, Texas, USA; 2012-05-19 - 2012-05-22
NMBU Untitled
 
46 Bohlin, Jon; van Passel, Mark W.J.; Snipen, Lars; Kristoffersen, Anja Bråthen; Ussery, David W.; Hardy, Simon P..
Relative entropy differences in bacterial chromosomes, plasmids, phages and genomic islands. BMC Genomics 2012 ;Volum 13.
NMBU VETINST Untitled
 
47 Mehmeti, Ibrahim; Færgestad, Ellen Mosleth; Bekker, Martijn; Snipen, Lars; Nes, Ingolf; Holo, Helge.
Growth Rate-Dependent Control in Enterococcus faecalis: Effects on the Transcriptome and Proteome, and Strong Regulation of Lactate Dehydrogenase. Applied and Environmental Microbiology 2012 ;Volum 78.(1) s. 170-176
NOFIMA NMBU Untitled
 
48 Mehmood, Tahir; Bohlin, Jon; Kristoffersen, Anja Bråthen; Sæbø, Solve; Warringer, Jonas; Snipen, Lars.
Exploration of multivariate analysis in microbial coding sequence modeling. BMC Bioinformatics 2012 ;Volum 13.
UiO NMBU VETINST Untitled
 
49 Mehmood, Tahir; Liland, Kristian Hovde; Snipen, Lars; Sæbø, Solve.
A review of variable selction methods in Partial Least Squares Regression. Chemometrics and Intelligent Laboratory Systems 2012 ;Volum 118. s. 62-69
NMBU Untitled
 
50 Mehmood, Tahir; Snipen, Lars.
Variable selection in PLS in presence of correlated variables. ims-APRM, 2012; 2012-07-02 - 2012-07-04
UiO NMBU Untitled
 
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