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Etternavn: Kunath   Fornavn: Benoit Josef   Alle publ. kanaler

Viser treff 1-36 av 36

2023
1 Delogu, Francesco; Kunath, Benoit Josef; Queirós, Pedro M.; Halder, Rashi; Lebrun, Laura A.; Pope, Phillip; May, Patrick; Widder, Stefanie; Muller, Emilie E. L.; Wilmes, Paul.
Forecasting the dynamics of a complex microbial community using integrated meta-omics. Nature Ecology and Evolution 2023 s. -
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2 Ferrillo, Alessandra; Kobel, Carl Mathias; Vera-Ponce de León, Arturo; Leanti La Rosa, Sabina; Kunath, Benoit Josef; Pope, Phillip; Hagen, Live Heldal.
Long-Read Metagenomics and CAZyme Discovery. I: Carbohydrate-Protein Interactions. Springer 2023 ISBN 978-1-0716-3151-5.
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3 Schiml, Valerie Claudia; Delogu, Francesco; Kumar, Praveen; Kunath, Benoit Josef; Batut, Bérénice; Mehta, Subina; Johnsen, James; Grüning, Björn; Pope, Phillip; Jagtap, Pratik D.; Griffin, Timothy J.; Arntzen, Magnus Øverlie.
Integrative meta-omics in Galaxy and beyond. 5th International Metaproteomics Symposium; 2023-04-25 - 2023-04-27
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4 Schiml, Valerie Claudia; Delogu, Francesco; Kumar, Praveen; Kunath, Benoit Josef; Batut, Bérénice; Mehta, Subina; Johnson, James E.; Grüning, Björn; Pope, Phillip; Jagtap, Pratik D.; Griffin, Timothy J.; Arntzen, Magnus Øverlie.
Integrative meta-omics in Galaxy and beyond. Environmental Microbiome 2023 ;Volum 18.(1) s. -
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2022
5 Martens, Eric C; Ostrowski, Matthew P; Pope, Phillip; Leanti La Rosa, Sabina; Kunath, Benoit Josef.
Enzymes and Microbes for Xanthan Gum Processing (Patent). Ard Innovation AS/2020_45, Serial No: 63/195,983. https://patents.google.com/patent/WO2022060859A1/en?oq=WO2022060859A1. NMBU 2022
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6 Ostrowski, Matthew P; Leanti La Rosa, Sabina; Kunath, Benoit Josef; Robertson, Andrew; Pereira, Gabriella V.; Hagen, Live Heldal; Varghese, Neha; Qiu, Ling; Yao, Tianming; Flint, Gabrielle; Li, James; McDonald, Sean P.; Buttner, Duna; Pudlo, Nicholas; Schnizlein, Matthew; Young, Vincent; Brumer, Harry; Schmidt, Thomas; Terrapon, Nicolas; Lombard, Vincent; Henrissat, Bernard; Hamaker, Bruce; Eloe-Fadrosh, Emiley A.; Tripathi, Ashootosh; Pope, Phillip; Martens, Eric C.
Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota. Nature Microbiology 2022 ;Volum 7. s. 556-569
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7 Bossche, Tim Van Den; Arntzen, Magnus Øverlie; Becher, Dörte; Benndorf, Dirk; Eijsink, Vincent; Henry, Celine; Jagtap, Pratik D.; Jehmlich, Nico; Juste, Catherine; Kunath, Benoit Josef; Mesuere, Bart; Muth, Thilo; Pope, Phillip; Seifert, Jana; Tanca, Alessandro; Uzzau, Sergio; Wilmes, Paul; Hettich, Robert; Armengaud, Jean.
The MetaProteomics Initiative. youtube.com 2022
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8 Bossche, Tim Van Den; Arntzen, Magnus Øverlie; Becher, Dörte; Benndorf, Dirk; Eijsink, Vincent; Henry, Celine; Jagtap, Pratik D.; Jehmlich, Nico; Juste, Catherine; Kunath, Benoit Josef; Mesuere, Bart; Muth, Thilo; Pope, Phillip; Seifert, Jana; Tanca, Alessandro; Uzzau, Sergio; Wilmes, Paul; Hettich, Robert; Armengaud, Jean.
The MetaProteomics Initiative,. youtube.com 2022
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2021
9 Bossche, Tim Van Den; Kunath, Benoit Josef; Schallert, Kay; Schäpe, Stephanie; Abraham, Paul; Armengaud, Jean; Arntzen, Magnus Øverlie; Bassignani, Ariane; Benndorf, Dirk; Fuchs, Stephan; Giannone, Richard; Griffin, Timothy J.; Hagen, Live Heldal; Muth, Thilo.
Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows. Nature Communications 2021
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10 Leanti La Rosa, Sabina; Ostrowski, Matthew P; Kunath, Benoit Josef; Hagen, Live Heldal; Martens, Eric C.; Pope, Phillip.
Inclusion of the food additive xanthan gum into diet drives adaptation of the human gut microbiota. National Microbiota Conference; 2021-11-11
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11 Mehta, S; Crane, M; Leith, E; Batut, B; Hiltemann, S; Arntzen, Magnus Øverlie; Kunath, Benoit Josef; Pope, Phillip; Delogu, Francesco; Sajulga, R; Kumar, P; Johnson, JE; Griffin, TJ; Jagtap, PD.
ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework. F1000 Research 2021
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12 Schiml, Valerie Claudia; Delogu, Francesco; Kumar, Praveen; Kunath, Benoit Josef; Mehta, Subina; Johnson, James E.; Grüning, Björn; Pope, Phillip; Jagtap, Pratik D.; Griffin, Timothy J.; Arntzen, Magnus Øverlie.
Integrative meta-omics in Galaxy. International Metaproteomics Symposium; 2021-09-27 - 2021-09-27
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13 Van Den Bossche, Tim; Arntzen, Magnus Øverlie; Becher, Dörte; Benndorf, Dirk; Eijsink, Vincent; Henry, Celine; Jagtap, Pratik D.; Jehmlich, Nico; Juste, Catherine; Kunath, Benoit Josef; Mesuere, Bart; Muth, Thilo; Pope, Phillip; Seifert, Jana; Tanca, Alessandro; Uzzau, Sergio; Wilmes, Paul; Hettich, Robert; Armengaud, Jean.
The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes. Microbiome 2021 ;Volum 9. s. -
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2020
14 Andersen, Thea Os; Kunath, Benoit Josef; Hagen, Live Heldal; Arntzen, Magnus Øverlie; Pope, Phillip Byron.
Rumen metaproteomics: Closer to linking rumen microbial function to animal productivity traits. Methods 2020 ;Volum 186. s. 42-51
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15 Delogu, Francesco; Kunath, Benoit Josef; Evans, PN; Arntzen, Magnus Øverlie; Hvidsten, Torgeir Rhoden; Pope, Phillip Byron.
Integration of absolute multi-omics reveals dynamic protein-to-RNA ratios and metabolic interplay within mixed-domain microbiomes. Nature Communications 2020 s. -
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2019
16 Ostrowski, Matthew P; Leanti La Rosa, Sabina; Kunath, Benoit Josef; Yao, T; Buttner, Duna; Pudlo, NA; Flint, G; Schmidt, Thomas; Hamaker, B; Pope, Phillip; Martens, Eric C..
Microbial Digestion of Xanthan Gum in the Human Gut. GRC for Carbohydrate-Active Enzymes for Glycan Conversions; 2019-07-21 - 2019-07-26
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17 Jagtap, PD; Kumar, P; Delogu, Francesco; Kunath, Benoit Josef; Li, S; Crane, M; Mehta, S; Sajulga, R; Leith, E; Johnson, JE; Ye, Y; Batut, B; Tang, H; Pope, Phillip; Arntzen, Magnus Øverlie; Griffin, TJ.
Metaproteomics powered by metatranscriptomics: Towards a multi-omic functional microbiome analysis. 68th AMSM Conference on Mass Spectrometry; 2019-05-31 - 2019-06-04
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18 Jagtap, PD; Kumar, P; Delogu, Francesco; Kunath, Benoit Josef; Li, S; Crane, M; Mehta, S; Sajulga, R; Leith, E; Johnson, JE; Ye, Y; Batut, B; Tang, H; Pope, Phillip; Arntzen, Magnus Øverlie; Griffin, TJ.
Metaproteomics powered by metatranscriptomics: Towards a multi-omic functional microbiome analysis. Galaxy community conference; 2019-07-01 - 2019-07-06
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19 Kunath, Benoit Josef; Minniti, Giusi; Skaugen, Morten; Hagen, Live Heldal; Vaaje-Kolstad, Gustav; Eijsink, Vincent; Pope, Phillip; Arntzen, Magnus Øverlie.
Metaproteomics: Sample Preparation and Methodological Considerations. I: Emerging Sample Treatments in Proteomics. Springer Nature 2019 ISBN 978-3-030-12297-3. s. 187-215
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20 Mehta, S; Sajulga, R; Easterly, C; Delogu, Francesco; Kunath, Benoit Josef; Kumar, P; Crane, M; Leith, E; Johnson, JE; McGowan, T; Rudney, J; Pope, Phillip; Arntzen, Magnus Øverlie; Griffin, TJ.
iMetaQuantome workflow: An integrated metaproteomics workflow for interactive, statistical and functional microbiome analysis.. 68th AMSM Conference on Mass Spectrometry; 2019-05-31 - 2019-06-04
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2018
21 Arntzen, Magnus Øverlie; Kunath, Benoit Josef; Minniti, Giusi; Hagen, Live Heldal; Pope, Phillip; Eijsink, Vincent.
Metaproteomics: Unique challenges and opportunities. Nordic Proteomics Conference; 2018-04-18 - 2018-04-20
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22 Kunath, Benoit Josef.
Integrated meta-omics enables strain-level deconvolution of a microbial cellulolytic community and reveals coordinated biomass degradation. Norwegian Microbiology Society Annual meeting; 2018-05-28 - 2018-05-29
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23 Kunath, Benoit Josef; Delogu, Francesco; Naas, Adrian Ertsås; Arntzen, Magnus Øverlie; Eijsink, Vincent; Henrissat, Bernard; Hvidsten, Torgeir Rhoden; Pope, Phillip.
From proteins to polysaccharides: lifestyle and genetic evolution of Coprothermobacter proteolyticus. The ISME Journal 2018
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24 Kunath, Benoit Josef; Delogu, Francesco; Naas, Adrian Ertsås; Arntzen, Magnus Øverlie; Eijsink, Vincent; Hvidsten, Torgeir Rhoden; Pope, Phillip.
From proteins to polysaccharides; adaptations of heterogeneous strains and interactions for biomass co-degradation. 17th International Symposium on Microbial Ecology (ISME17); 2018-08-12 - 2018-08-17
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25 Kunath, Benoit Josef; Li, S; Ye, Y; Arntzen, Magnus Øverlie; Pope, Phillip.
Meta-omics integration generates a more comprehensive database and enhances protein identification. The 3rd International Metaproteomics Symposium; 2018-12-03 - 2018-12-05
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26 Kunath, Benoit Josef.
Interpreting the irrecoverable microbiota in digestive ecosystems. Ås: NMBU 2018 (ISBN 978-82-575-1529-4) 194 s.
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2017
27 Arntzen, Magnus Øverlie; Minniti, Giusi; Kunath, Benoit Josef; Frank, Jeremy; Hagen, Live Heldal; Jensen, Sigmund; Vaaje-Kolstad, Gustav; Eijsink, Vincent; Pope, Phillip.
Integrated meta-omics in digestive ecosystems: from biogas reactors to marine host-associated microbiomes. 2nd international metaproteomics symposium; 2017-06-14 - 2017-06-16
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28 Jensen, Marianne S; Fredriksen, Lasse; Altermark, Bjørn; Stokke, Runar; Pope, Phillip; Østby, Heidi; Kunath, Benoit Josef; Smalås, Arne O.; Steen, Ida Helene; Vaaje-Kolstad, Gustav; Eijsink, Vincent.
Discovery, characterization and engineering of bacterial thermostable cellulose-degrading enzymes. Enzyme Engineering XXIV; 2017-09-24 - 2017-09-28
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29 Jensen, Marianne Slang; Fredriksen, Lasse; Altermark, Bjørn; Stokke, Runar; Mackenzie, Alasdair; Pope, Phillip; Kunath, Benoit Josef; Johansen, Joakim; Smalås, Arne O.; Steen, Ida Helene; Vaaje-Kolstad, Gustav; Eijsink, Vincentius Gerardus Henricus.
Bioprospecting of enzymes for processing lignocellulosic biomass. NBS Contactmeeting 2017; 2017-01-19 - 2017-01-22
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30 Jensen, Marianne Slang; Fredriksen, Lasse; Altermark, Bjørn; Stokke, Runar; Mackenzie, Alasdair; Pope, Phillip; Kunath, Benoit Josef; Johansen, Joakim; Smalås, Arne O.; Steen, Ida Helene; Vaaje-Kolstad, Gustav; Eijsink, Vincentius Gerardus Henricus.
Bioprospecting of enzymes for processing lignocellulosic biomass. NBS Contactmeeting 2017; 2017-01-19 - 2017-01-22
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31 Kunath, Benoit Josef; Bremges, Andreas; Weimann, Aaron; McHardy, Alice C.; Pope, Phillip.
Metagenomics and CAZyme Discovery. Methods in molecular biology 2017 ;Volum 1588. s. 255-277
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32 Kunath, Benoit Josef; Delogu, Francesco; Arntzen, Magnus Øverlie; Eijsink, Vincent; Pope, Phillip.
Combination of metagenomics and quantitative metaproteomics to unravel microbial interactions during cellulose deconstruction. 2nd international metaproteomics symposium; 2017-06-14 - 2017-06-16
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2016
33 Fredriksen, Lasse; Jensen, Marianne Slang; Chylenski, Piotr; Kunath, Benoit; Mackenzie, Alasdair; Johansen, Joakim; Forsberg, Zarah; Larsbrink, Johan; Pope, Phillip; Vaaje-Kolstad, Gustav; Eijsink, Vincent.
Enzyme development for Norwegian biomass. The NorZymeD Annual meeting; 2016-08-16 - 2016-08-17
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34 Kunath, Benoit; Frank, Jeremy A; Arntzen, Magnus Øverlie; Eijsink, Vincent; Pope, Phillip.
Temporal meta-omics analysis of a minimalistic syntrophic biogas community. The second annual conference of NORBIS,; 2016-09-14 - 2016-09-16
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35 Kunath, Benoit; Frank, Jeremy; Arntzen, Magnus Øverlie; Eijsink, Vincent; Pope, Phillip.
Metaproteogenomic analysis of a minimalistic biogas-producing community. The 4th Norwegian Microbiology Meeting (NoMi-16); 2016-04-14 - 2016-04-14
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36 Kunath, Benoit; Frank, Jeremy; Arntzen, Magnus Øverlie; Eijsink, Vincent; Pope, Phillip.
Temporal meta-omics analysis of a minimalistic syntrophic biogas community. 16th International Symposium on Microbial Ecology; 2016-08-21 - 2016-08-26
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